| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119870524
Identifier: 119870524
GI number: 119870524
Start: 4727417
End: 4729033
Strand: Direct
Name: 119870524
Synonym: Mkms_4495
Alternate gene names: NA
Gene position: 4727417-4729033 (Clockwise)
Preceding gene: 119870503
Following gene: 119870525
Centisome position: 82.4
GC content: 71.86
Gene sequence:
>1617_bases ATGACGTCGCCCACCGAGTCTTTGCAGGCCACCCGCTACCCCGGAGCGCAGCCGACTGTCACCGACGGGTGGCGCCTCGA GCGGTTGACCGCACCGAGCCGGTTGTTCGGCGCCAACGGCCTGCGCACCGGCCCCGACGGGCGGGTCTACGTCGCCCAGG TGACCGGCAGCCAGATCAGCGCCCTGGACCTGGGCAGCGGGACCCTGGAGACGGTCAGCCCGAAGGGCGGCGACATCATC GCCCCCGACGACGTGGCGTTCGGACCCGACGGCGCCCTGTTCGCCACCGAGGTGATGGACGGTCGGGTCAGCGTGCGCGA GGCCGACGGCCGGACCCGCGTCCTGCGCGACGATCTGCCGTGTGCCAACGGCATCACCGTCCACCAGGGCCGGCTGTTCA TCGGTGAGTGCCGCGAAGGTGGCCGGCTGCTGGAACTCGACCGCAACGGCGGCATCGTCCGCACGCTCGCCGAGAACCTG CCGTCGCCGAACGCGATGGAGGTCGGTCCGGACGGATTGCTGTACTACCCGCTGATGACGGCCAACGAGATCTGGCGGGT GGATCCGAACGGCGGGGAGCCGCAGCGGGTCGCCGGTGACCTCGGGGTGCCGGATGCGGTGAAGTTCGACGCCGACGGCT TCCTCGTCTCCACTCAGGTGGCCAGCGGCCAGGTGCTGCGCATCGACCCGCGCAGCGGTGCGCAGACGCTGCTCGCGCAG CTGTCGCCCGGGTTGGACAACCTGACCTTCGTCGGCGACCGGTTGTTCGTCTCGAATTTCACCGGCGAGATCACCGAGAT CCTGTCCGGCGGCGAAACCCGCACCACCCTGGCCGGCGGGCTGAACTGGCCGCTGGACCTGGCGGTCGGCGACGACGGCC GGCTCTACGTCGCCGACGGCACCTACTTCTACGTCGTGGAGGCCGACGGATCGCTGCAGACCGTCGGGATGTTGTTCACC CCCGGCTATCCCGGCTTCCTGCGCGGTCTGACCCCCGTCGGCGGCGGCGAGTTCGTGGTCACCACCTCCGGCGGCCAGGT GACGCGCTACCGGCCCGCTGCCGGTGAGAGCGAGGTCCTGGCGGACGGTTTCGACCAGCTGTACGGCATCGCGGCCACAC CGGGCGGTGCGGCCGTCTTCGCCGAACTCGGCACCGGCCGGGTGCACTCCGTCCACGACGGCGAGGTGCAACTGCTGGCC GGCGATCTCCGTGAACCCGTGGGGGTGGCGATCGCCCCGGACGGCAACCCACTGGTCGCCGAGTCCGGGGCCGGGCGGGT GGTGCGCCTGGCCGGGTCGCAGGCGGTCACCGTGGTCGACGGGTTGCAGCGACCGCAGGGGCTGGTGGTCGCCGACGGCG TGCTCTACATCGTCGACGCCGGTGCGAAGGAAGTGGTCGCGGTCGACATGAACAGCGGCGCCCGCCAGACGATCGCCACC GGGTTGCCCGTCGGCCCGCCGCCGGGTGTGGAACCCAAACCACTGCGCGGCATGCCGCCGTTCTCCGGCCCGCAGGGACC GTTCGCGGGGATCGCCGCGGCGCCGGACGGCACGCTGTTCGTCTCCGCCGACGGCGACGGCAGCGTGCTGGCGTTACGAC GCACCGCCCGCACATGA
Upstream 100 bases:
>100_bases GCAGAACACTATTCCGCAGGGGTTATCCGGCCGTCAAGGGTCCTTTGATGCGCCGCGGACCCTATTGTCTGGACTAGCGA GGGTTGATAACGTCCGGCTC
Downstream 100 bases:
>100_bases GCGTCACGCACCCCGAGCACCGCTACCTGCAGGTGGCTCGCACCCTGCGCAAGGAGATCGTCGACGGGGTGTACCCGGTC GGATCGCAGTTGCCCACCGA
Product: SMP-30/gluconolaconase/LRE domain-containing protein
Products: NA
Alternate protein names: SMP-30/Gluconolaconase/LRE Domain-Containing Protein; NHL Repeat Containing Protein; SMP-30/Gluconolaconase/LRE Domain Protein; SMP-30/Gluconolaconase/LRE-Like Region-Containing Protein
Number of amino acids: Translated: 538; Mature: 537
Protein sequence:
>538_residues MTSPTESLQATRYPGAQPTVTDGWRLERLTAPSRLFGANGLRTGPDGRVYVAQVTGSQISALDLGSGTLETVSPKGGDII APDDVAFGPDGALFATEVMDGRVSVREADGRTRVLRDDLPCANGITVHQGRLFIGECREGGRLLELDRNGGIVRTLAENL PSPNAMEVGPDGLLYYPLMTANEIWRVDPNGGEPQRVAGDLGVPDAVKFDADGFLVSTQVASGQVLRIDPRSGAQTLLAQ LSPGLDNLTFVGDRLFVSNFTGEITEILSGGETRTTLAGGLNWPLDLAVGDDGRLYVADGTYFYVVEADGSLQTVGMLFT PGYPGFLRGLTPVGGGEFVVTTSGGQVTRYRPAAGESEVLADGFDQLYGIAATPGGAAVFAELGTGRVHSVHDGEVQLLA GDLREPVGVAIAPDGNPLVAESGAGRVVRLAGSQAVTVVDGLQRPQGLVVADGVLYIVDAGAKEVVAVDMNSGARQTIAT GLPVGPPPGVEPKPLRGMPPFSGPQGPFAGIAAAPDGTLFVSADGDGSVLALRRTART
Sequences:
>Translated_538_residues MTSPTESLQATRYPGAQPTVTDGWRLERLTAPSRLFGANGLRTGPDGRVYVAQVTGSQISALDLGSGTLETVSPKGGDII APDDVAFGPDGALFATEVMDGRVSVREADGRTRVLRDDLPCANGITVHQGRLFIGECREGGRLLELDRNGGIVRTLAENL PSPNAMEVGPDGLLYYPLMTANEIWRVDPNGGEPQRVAGDLGVPDAVKFDADGFLVSTQVASGQVLRIDPRSGAQTLLAQ LSPGLDNLTFVGDRLFVSNFTGEITEILSGGETRTTLAGGLNWPLDLAVGDDGRLYVADGTYFYVVEADGSLQTVGMLFT PGYPGFLRGLTPVGGGEFVVTTSGGQVTRYRPAAGESEVLADGFDQLYGIAATPGGAAVFAELGTGRVHSVHDGEVQLLA GDLREPVGVAIAPDGNPLVAESGAGRVVRLAGSQAVTVVDGLQRPQGLVVADGVLYIVDAGAKEVVAVDMNSGARQTIAT GLPVGPPPGVEPKPLRGMPPFSGPQGPFAGIAAAPDGTLFVSADGDGSVLALRRTART >Mature_537_residues TSPTESLQATRYPGAQPTVTDGWRLERLTAPSRLFGANGLRTGPDGRVYVAQVTGSQISALDLGSGTLETVSPKGGDIIA PDDVAFGPDGALFATEVMDGRVSVREADGRTRVLRDDLPCANGITVHQGRLFIGECREGGRLLELDRNGGIVRTLAENLP SPNAMEVGPDGLLYYPLMTANEIWRVDPNGGEPQRVAGDLGVPDAVKFDADGFLVSTQVASGQVLRIDPRSGAQTLLAQL SPGLDNLTFVGDRLFVSNFTGEITEILSGGETRTTLAGGLNWPLDLAVGDDGRLYVADGTYFYVVEADGSLQTVGMLFTP GYPGFLRGLTPVGGGEFVVTTSGGQVTRYRPAAGESEVLADGFDQLYGIAATPGGAAVFAELGTGRVHSVHDGEVQLLAG DLREPVGVAIAPDGNPLVAESGAGRVVRLAGSQAVTVVDGLQRPQGLVVADGVLYIVDAGAKEVVAVDMNSGARQTIATG LPVGPPPGVEPKPLRGMPPFSGPQGPFAGIAAAPDGTLFVSADGDGSVLALRRTART
Specific function: Unknown
COG id: COG3391
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55609; Mature: 55478
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPTESLQATRYPGAQPTVTDGWRLERLTAPSRLFGANGLRTGPDGRVYVAQVTGSQIS CCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHCCCCCCCCCCCCEEEEEECCCEEE ALDLGSGTLETVSPKGGDIIAPDDVAFGPDGALFATEVMDGRVSVREADGRTRVLRDDLP EEECCCCCEEEECCCCCCEECCCCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEECCCC CANGITVHQGRLFIGECREGGRLLELDRNGGIVRTLAENLPSPNAMEVGPDGLLYYPLMT CCCCEEEECCEEEEEECCCCCEEEEECCCCCEEHHHHHHCCCCCCEEECCCCEEEEEEEC ANEIWRVDPNGGEPQRVAGDLGVPDAVKFDADGFLVSTQVASGQVLRIDPRSGAQTLLAQ CCEEEEECCCCCCHHHEECCCCCCCCEEECCCCEEEEEEECCCEEEEECCCCCHHHHHHH LSPGLDNLTFVGDRLFVSNFTGEITEILSGGETRTTLAGGLNWPLDLAVGDDGRLYVADG HCCCCCCEEEECCEEEEECCCHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCEEEEECC TYFYVVEADGSLQTVGMLFTPGYPGFLRGLTPVGGGEFVVTTSGGQVTRYRPAAGESEVL EEEEEEECCCCEEEEEEEECCCCCHHHHCCCCCCCCCEEEEECCCEEEEECCCCCCCHHH ADGFDQLYGIAATPGGAAVFAELGTGRVHSVHDGEVQLLAGDLREPVGVAIAPDGNPLVA HHCHHHHEEEEECCCCEEEEEECCCCEEEEECCCEEEEEECCCCCCCEEEECCCCCEEEE ESGAGRVVRLAGSQAVTVVDGLQRPQGLVVADGVLYIVDAGAKEVVAVDMNSGARQTIAT ECCCCCEEEEECCCEEEEEHHCCCCCCEEEECCEEEEEECCCCEEEEEECCCCCCHHHHC GLPVGPPPGVEPKPLRGMPPFSGPQGPFAGIAAAPDGTLFVSADGDGSVLALRRTART CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCEEEEEECCCC >Mature Secondary Structure TSPTESLQATRYPGAQPTVTDGWRLERLTAPSRLFGANGLRTGPDGRVYVAQVTGSQIS CCCHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHCCCCCCCCCCCCEEEEEECCCEEE ALDLGSGTLETVSPKGGDIIAPDDVAFGPDGALFATEVMDGRVSVREADGRTRVLRDDLP EEECCCCCEEEECCCCCCEECCCCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEECCCC CANGITVHQGRLFIGECREGGRLLELDRNGGIVRTLAENLPSPNAMEVGPDGLLYYPLMT CCCCEEEECCEEEEEECCCCCEEEEECCCCCEEHHHHHHCCCCCCEEECCCCEEEEEEEC ANEIWRVDPNGGEPQRVAGDLGVPDAVKFDADGFLVSTQVASGQVLRIDPRSGAQTLLAQ CCEEEEECCCCCCHHHEECCCCCCCCEEECCCCEEEEEEECCCEEEEECCCCCHHHHHHH LSPGLDNLTFVGDRLFVSNFTGEITEILSGGETRTTLAGGLNWPLDLAVGDDGRLYVADG HCCCCCCEEEECCEEEEECCCHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCEEEEECC TYFYVVEADGSLQTVGMLFTPGYPGFLRGLTPVGGGEFVVTTSGGQVTRYRPAAGESEVL EEEEEEECCCCEEEEEEEECCCCCHHHHCCCCCCCCCEEEEECCCEEEEECCCCCCCHHH ADGFDQLYGIAATPGGAAVFAELGTGRVHSVHDGEVQLLAGDLREPVGVAIAPDGNPLVA HHCHHHHEEEEECCCCEEEEEECCCCEEEEECCCEEEEEECCCCCCCEEEECCCCCEEEE ESGAGRVVRLAGSQAVTVVDGLQRPQGLVVADGVLYIVDAGAKEVVAVDMNSGARQTIAT ECCCCCEEEEECCCEEEEEHHCCCCCCEEEECCEEEEEECCCCEEEEEECCCCCCHHHHC GLPVGPPPGVEPKPLRGMPPFSGPQGPFAGIAAAPDGTLFVSADGDGSVLALRRTART CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA