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The map label for this gene is 119870476

Identifier: 119870476

GI number: 119870476

Start: 4680992

End: 4681939

Strand: Direct

Name: 119870476

Synonym: Mkms_4447

Alternate gene names: NA

Gene position: 4680992-4681939 (Clockwise)

Preceding gene: 119870475

Following gene: 119870477

Centisome position: 81.59

GC content: 62.76

Gene sequence:

>948_bases
ATGCGATCCATCTGGAAGGGTTCGATCGCCTTCGGCCTGGTGAACGTACCGGTCAAGGTCTACAGCGCGACCGAGGACCA
TGACATCAAGTTCCACCAGGTCCACGCGAAGGACAACGGCCGGATCCGCTACAAGCGGACCTGCGAGGTCTGCGGTGAAG
TGGTCGAGTACCGCGACATCGCCAAGGCCTTCGAATCCGACGACGGTCAGATGGTCGTCATCACCGACGAGGACATCGCC
ACGCTGCCGGAGGAACGCAGCCGGGAGATCGAGGTACTGGAGTTCGTCCCGGCCAGCGACCTCGACCCGCTGATGTACGA
CCGCAGCTACTTCCTCGAGCCCGACGGAAAGTCGTCGAAATCCTATGTGCTGCTTGCCAAGACGCTGTCGGAGACCGATC
GTGTCGCGATCGTGCACTTCGCGTTGCGCAACAAGACGCGGTTGGCCGCCCTGCGCGTCAAGGACTTCTCCAAACGTGAC
GTGATGATGATCCACACGCTGCTGTGGCCCGACGAGATCCGCGATCCCGATTTCCCCGTGCTGGACAAGGAAGTCGAGAT
CAAACCCGCCGAGTTGAAGATGGCCGGTCAGGTGGTCGAATCGATGACCGACGACTTCAACCCGGACCGGTATCACGACG
ACTACCAGGATCAGCTGCGGGAGTTGGTGGAGGCCAAGCTCGAAGGCGGTGAGGCGTTCGCCGTCGAGGAACAGCCGACC
GAACTCGACGAGACCGAGGACGTGTCCGACCTGCTGGCGAAGCTGGAGGCCAGCGTGAAGGCGCGGCGCTCGGGTTCGAG
CTCCGGCAGTGACTCCGACGACGGCGACGAACCGGCGAAGAAGGCCCCGGCCAAGAAGTCGGCGGCCGAGAAGGCTCCCG
CCAAGAAGGCCGCGAAAAAGACCGCTGCCAAGAAGGCGCCGGCCAAGAAGGCTTCCGCCAAGAAATAG

Upstream 100 bases:

>100_bases
GGTGCGGACCTTCCGGATCGGGCCACCCGCGACGCCGCGGCGCGCGAACCCGCGACGCTGATCGACCGTCGCCGCTGATG
ATGTGGGCCATACTGGGCGT

Downstream 100 bases:

>100_bases
CGACCTTCTCCGCCGAACGTGCGCTCAGCGCGAGATCCGGCGCGATTTTTCGCAGCCGATGCACGTTCGGGGGCACCGAC
ACCGACCGTGACCGAATTAG

Product: DNA end-binding protein Ku

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MRSIWKGSIAFGLVNVPVKVYSATEDHDIKFHQVHAKDNGRIRYKRTCEVCGEVVEYRDIAKAFESDDGQMVVITDEDIA
TLPEERSREIEVLEFVPASDLDPLMYDRSYFLEPDGKSSKSYVLLAKTLSETDRVAIVHFALRNKTRLAALRVKDFSKRD
VMMIHTLLWPDEIRDPDFPVLDKEVEIKPAELKMAGQVVESMTDDFNPDRYHDDYQDQLRELVEAKLEGGEAFAVEEQPT
ELDETEDVSDLLAKLEASVKARRSGSSSGSDSDDGDEPAKKAPAKKSAAEKAPAKKAAKKTAAKKAPAKKASAKK

Sequences:

>Translated_315_residues
MRSIWKGSIAFGLVNVPVKVYSATEDHDIKFHQVHAKDNGRIRYKRTCEVCGEVVEYRDIAKAFESDDGQMVVITDEDIA
TLPEERSREIEVLEFVPASDLDPLMYDRSYFLEPDGKSSKSYVLLAKTLSETDRVAIVHFALRNKTRLAALRVKDFSKRD
VMMIHTLLWPDEIRDPDFPVLDKEVEIKPAELKMAGQVVESMTDDFNPDRYHDDYQDQLRELVEAKLEGGEAFAVEEQPT
ELDETEDVSDLLAKLEASVKARRSGSSSGSDSDDGDEPAKKAPAKKSAAEKAPAKKAAKKTAAKKAPAKKASAKK
>Mature_315_residues
MRSIWKGSIAFGLVNVPVKVYSATEDHDIKFHQVHAKDNGRIRYKRTCEVCGEVVEYRDIAKAFESDDGQMVVITDEDIA
TLPEERSREIEVLEFVPASDLDPLMYDRSYFLEPDGKSSKSYVLLAKTLSETDRVAIVHFALRNKTRLAALRVKDFSKRD
VMMIHTLLWPDEIRDPDFPVLDKEVEIKPAELKMAGQVVESMTDDFNPDRYHDDYQDQLRELVEAKLEGGEAFAVEEQPT
ELDETEDVSDLLAKLEASVKARRSGSSSGSDSDDGDEPAKKAPAKKSAAEKAPAKKAAKKTAAKKAPAKKASAKK

Specific function: Could be involved in DNA repair [H]

COG id: COG1273

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ku domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006164
- InterPro:   IPR009187
- InterPro:   IPR016194 [H]

Pfam domain/function: PF02735 Ku [H]

EC number: NA

Molecular weight: Translated: 35222; Mature: 35222

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSIWKGSIAFGLVNVPVKVYSATEDHDIKFHQVHAKDNGRIRYKRTCEVCGEVVEYRDI
CCCCCCCCCEEEEEECCEEEEECCCCCCEEEEEEEECCCCCEEEHHHHHHHHHHHHHHHH
AKAFESDDGQMVVITDEDIATLPEERSREIEVLEFVPASDLDPLMYDRSYFLEPDGKSSK
HHHHHCCCCCEEEEECCCHHHCCHHHCCCEEEEEECCCCCCCHHHHCCCEEECCCCCCCC
SYVLLAKTLSETDRVAIVHFALRNKTRLAALRVKDFSKRDVMMIHTLLWPDEIRDPDFPV
CEEEEEEHHCCCCCEEEEEEECCCCCEEEEEEECCCCCCCEEEHHHHHCHHHCCCCCCCC
LDKEVEIKPAELKMAGQVVESMTDDFNPDRYHDDYQDQLRELVEAKLEGGEAFAVEEQPT
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCC
ELDETEDVSDLLAKLEASVKARRSGSSSGSDSDDGDEPAKKAPAKKSAAEKAPAKKAAKK
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHCHHHHHHHH
TAAKKAPAKKASAKK
HHHHHCCCCCCCCCC
>Mature Secondary Structure
MRSIWKGSIAFGLVNVPVKVYSATEDHDIKFHQVHAKDNGRIRYKRTCEVCGEVVEYRDI
CCCCCCCCCEEEEEECCEEEEECCCCCCEEEEEEEECCCCCEEEHHHHHHHHHHHHHHHH
AKAFESDDGQMVVITDEDIATLPEERSREIEVLEFVPASDLDPLMYDRSYFLEPDGKSSK
HHHHHCCCCCEEEEECCCHHHCCHHHCCCEEEEEECCCCCCCHHHHCCCEEECCCCCCCC
SYVLLAKTLSETDRVAIVHFALRNKTRLAALRVKDFSKRDVMMIHTLLWPDEIRDPDFPV
CEEEEEEHHCCCCCEEEEEEECCCCCEEEEEEECCCCCCCEEEHHHHHCHHHCCCCCCCC
LDKEVEIKPAELKMAGQVVESMTDDFNPDRYHDDYQDQLRELVEAKLEGGEAFAVEEQPT
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCC
ELDETEDVSDLLAKLEASVKARRSGSSSGSDSDDGDEPAKKAPAKKSAAEKAPAKKAAKK
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHCHHHHHHHH
TAAKKAPAKKASAKK
HHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA