Click here to switch to the map view.

The map label for this gene is yedQ [C]

Identifier: 119870433

GI number: 119870433

Start: 4629368

End: 4630486

Strand: Direct

Name: yedQ [C]

Synonym: Mkms_4404

Alternate gene names: 119870433

Gene position: 4629368-4630486 (Clockwise)

Preceding gene: 119870432

Following gene: 119870439

Centisome position: 80.69

GC content: 68.99

Gene sequence:

>1119_bases
ATGACCGGCGCAATGCGCGAATGGTGGCGCCAACCAGACCACTACTACTGGCTCACCGCATTCCTCGCGGCTCGCGGCGC
GCAACGCGGTATCTGCCGCATGGTCGCGGGGTCGCTCCTCGGATTCGCTCTCGTCCTGCTGGTGTCGATGTTCAGCCCGG
CGGGACCGACGGGCCTGGCCGGGCGCATCGGGACGGCGGTCATCGCGGTGGCCCTCATCGGCATGGCGATCGGCTGGTGG
CGCGAGGGCTGGCCCAGCCAACGTCAATCGGCCGGGTTCGTGGTCGCGGCCGCACTGGCGATCGGCGTCGGGTGTCTGAT
CAAAGCCGATCCGTTCAACGGCATGTTCGGTGCGGCGACCTTCGCGGTCCTCGCCGGCTACATCGCGTTCTTCCACACGC
CGAAGATGATGGCGTTCAACTTCGTGGTGGCACTGCTCACCTCGACGGTGCTCGCCGTGCGCGTGGCGCTCGACGGCGAT
CCGGCGCTGGCCATCTCGACGCTGATCTTCCTGGTCATCCTCTACGTCGCGACCCCGTCGGTGTGTCATGCGCTGGTCCA
CCTGCTGGGCATCGACGTCCTCAACGCCGACATCGACCCGCTGACCGGCCTCTACAACCGCGACGCCTTCGACCGTGCCG
CTGCGGCCTACATCAGCTCCCGCAACCGCGACGACGACCGGTACTTCGTCCTCGTCGTCGTGGACCTGGACAACTTCGCG
CTGCTCACCCAGGCCAAGGGCCGGCAGGCCGGCGAGCGGGCGCGGGTCGCCGCGGCGCAGACCCTGCGGGAGACCACGCG
GCAGAACGCTGTGATCGCCCACCTACCCGAGACCGAGTTCCTGATCGCCGACAGCTTCCCGACGACCGACAGCTCAGCGC
TCGTCGAGCGGGTGCGCAGTGCGATCCGCACCACCCCGCCGCGGACGTCGGCGAGTATCGGCGTGGTGAGCACGCCGATG
CTGGGGCTCGTGGAACGCCCACCGGAGCAGGTCCTCGACGAGTTGCTCGAGCTCGCCCGTTCGGCCGTCGTCGTGGCCCG
CCGGGCCGGTGGCAATCAGGCGCACCACATCAACTGCCCACCGCTGCGGGCGCTCGAAGACGACGAACCACCGCTCTAA

Upstream 100 bases:

>100_bases
GCGTCCCGACCCGACAGTTGCGCGGGGACGTCTGCGGGGTCAAGCTGCAATTGTCGATGTCATCACCAAGGCGACGTCGG
CCGTCAGTTCGAGGGGGTTC

Downstream 100 bases:

>100_bases
GCCCTTGCGCCGAGACTGCTCGGGGATCGTGTTCGCGGCCGCGAAGCGTGCGCTGACCGCAGTCTCGGCGAGCGAGTCAG
TGCGCGAAGTGCCGCGCGCC

Product: diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MTGAMREWWRQPDHYYWLTAFLAARGAQRGICRMVAGSLLGFALVLLVSMFSPAGPTGLAGRIGTAVIAVALIGMAIGWW
REGWPSQRQSAGFVVAAALAIGVGCLIKADPFNGMFGAATFAVLAGYIAFFHTPKMMAFNFVVALLTSTVLAVRVALDGD
PALAISTLIFLVILYVATPSVCHALVHLLGIDVLNADIDPLTGLYNRDAFDRAAAAYISSRNRDDDRYFVLVVVDLDNFA
LLTQAKGRQAGERARVAAAQTLRETTRQNAVIAHLPETEFLIADSFPTTDSSALVERVRSAIRTTPPRTSASIGVVSTPM
LGLVERPPEQVLDELLELARSAVVVARRAGGNQAHHINCPPLRALEDDEPPL

Sequences:

>Translated_372_residues
MTGAMREWWRQPDHYYWLTAFLAARGAQRGICRMVAGSLLGFALVLLVSMFSPAGPTGLAGRIGTAVIAVALIGMAIGWW
REGWPSQRQSAGFVVAAALAIGVGCLIKADPFNGMFGAATFAVLAGYIAFFHTPKMMAFNFVVALLTSTVLAVRVALDGD
PALAISTLIFLVILYVATPSVCHALVHLLGIDVLNADIDPLTGLYNRDAFDRAAAAYISSRNRDDDRYFVLVVVDLDNFA
LLTQAKGRQAGERARVAAAQTLRETTRQNAVIAHLPETEFLIADSFPTTDSSALVERVRSAIRTTPPRTSASIGVVSTPM
LGLVERPPEQVLDELLELARSAVVVARRAGGNQAHHINCPPLRALEDDEPPL
>Mature_371_residues
TGAMREWWRQPDHYYWLTAFLAARGAQRGICRMVAGSLLGFALVLLVSMFSPAGPTGLAGRIGTAVIAVALIGMAIGWWR
EGWPSQRQSAGFVVAAALAIGVGCLIKADPFNGMFGAATFAVLAGYIAFFHTPKMMAFNFVVALLTSTVLAVRVALDGDP
ALAISTLIFLVILYVATPSVCHALVHLLGIDVLNADIDPLTGLYNRDAFDRAAAAYISSRNRDDDRYFVLVVVDLDNFAL
LTQAKGRQAGERARVAAAQTLRETTRQNAVIAHLPETEFLIADSFPTTDSSALVERVRSAIRTTPPRTSASIGVVSTPML
GLVERPPEQVLDELLELARSAVVVARRAGGNQAHHINCPPLRALEDDEPPL

Specific function: Unknown

COG id: COG3706

COG function: function code T; Response regulator containing a CheY-like receiver domain and a GGDEF domain

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39977; Mature: 39846

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGAMREWWRQPDHYYWLTAFLAARGAQRGICRMVAGSLLGFALVLLVSMFSPAGPTGLA
CCCCHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
GRIGTAVIAVALIGMAIGWWREGWPSQRQSAGFVVAAALAIGVGCLIKADPFNGMFGAAT
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHEEEECCCCCHHHHHH
FAVLAGYIAFFHTPKMMAFNFVVALLTSTVLAVRVALDGDPALAISTLIFLVILYVATPS
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHCHH
VCHALVHLLGIDVLNADIDPLTGLYNRDAFDRAAAAYISSRNRDDDRYFVLVVVDLDNFA
HHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEE
LLTQAKGRQAGERARVAAAQTLRETTRQNAVIAHLPETEFLIADSFPTTDSSALVERVRS
EEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCCCCHHHHHHHHHH
AIRTTPPRTSASIGVVSTPMLGLVERPPEQVLDELLELARSAVVVARRAGGNQAHHINCP
HHHCCCCCCCCCCCCHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PLRALEDDEPPL
CCCCCCCCCCCC
>Mature Secondary Structure 
TGAMREWWRQPDHYYWLTAFLAARGAQRGICRMVAGSLLGFALVLLVSMFSPAGPTGLA
CCCHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
GRIGTAVIAVALIGMAIGWWREGWPSQRQSAGFVVAAALAIGVGCLIKADPFNGMFGAAT
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHEEEECCCCCHHHHHH
FAVLAGYIAFFHTPKMMAFNFVVALLTSTVLAVRVALDGDPALAISTLIFLVILYVATPS
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHCHH
VCHALVHLLGIDVLNADIDPLTGLYNRDAFDRAAAAYISSRNRDDDRYFVLVVVDLDNFA
HHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEE
LLTQAKGRQAGERARVAAAQTLRETTRQNAVIAHLPETEFLIADSFPTTDSSALVERVRS
EEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCCCCHHHHHHHHHH
AIRTTPPRTSASIGVVSTPMLGLVERPPEQVLDELLELARSAVVVARRAGGNQAHHINCP
HHHCCCCCCCCCCCCHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PLRALEDDEPPL
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA