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The map label for this gene is 119870386

Identifier: 119870386

GI number: 119870386

Start: 4577860

End: 4578759

Strand: Direct

Name: 119870386

Synonym: Mkms_4357

Alternate gene names: NA

Gene position: 4577860-4578759 (Clockwise)

Preceding gene: 119870385

Following gene: 119870387

Centisome position: 79.79

GC content: 69.22

Gene sequence:

>900_bases
ATGAGCACCACAACCGAGCACGCCGAGCGGTTCACCCTGCTGCGGCCGCTGCTGTTCACGATCGCCTACGAGATCCTCGG
CAGCGCAACCGAATCCGACGACGTACTGCAGGAGAGCTACCTGCGCTGGGCCGAGGTGGACCTCGATACGGTGCACGACA
CCAAGGCCTACCTCGCCCAGCTCGTCACCCGGCAGGCCCTCAACGCGCTGCGGGCGCAGTCCCGGCGGCGGGAGGACTAC
ATCGGGCCGTGGCTGCCCGAACCGCTGCTGGTGCAATCGAAGGACGCCGAGGCCGATGTGGTCCTGGCCGAATCGGTGTC
GATGGCCATGCTCGTGGTCCTCGAGACCCTCACCCCCGACGAGCGGGCGGTGTTCGTGCTGCGCGAGGTGTTCGGCTTCA
GCCATGACGAGATCGCCGCCGCGGTCGGCAAGTCGACGACGGCGGTGCGGCAGATGGCCCACCGCGCCCGCGAACACGTC
CAGTCACGCCGCAAACGGTTCGAACCGGTCGATCCGAAGACGTCGACGGAGATCACCATGCGGTTCTTCGCCGCGGCGTC
GACCGGTGACCTCGACGGGCTGATGGAACTGCTGGCACCCGATGTGGTGTGGACCGCCGACAGCGCGGGCAAGCGCAGCG
CGGCGCGCCGGCCCGTCACCGGCGCCGAACGGGTCGGCAGGCTGGTCCTGGGCCTGCTGCGGGCCGCGGGCGAAGCCGGC
CGGATCGAACCGGCCGTGTACAACAACGCGCCCGCGCTCAAGCTCTTCCTCGGGGACAGCTTCGAGGGCATCGTGACCGT
CGAGATCGTGGACGGCCGGATCAGCCACTTCTACGCGATGCGCAACCCCGACAAGCTGGTCGGCGTGGACGTCCCGCGGG
AGATCACCCGCACGGTCTGA

Upstream 100 bases:

>100_bases
CGATCTCGTTCCTGTCCCGCGAGGCGCGCAAACCGGGAAGCTACTTCTGGCTCAAGGGCGGTAAGCGCAGGCAGCGCCTG
GCCGAGGCCCTCCCGGTCCG

Downstream 100 bases:

>100_bases
GAAGCTGAGGCGGTGCGGATCGAGCGGCTCGGCGACCTCGGCGATGCGCCCACGGTGCTCGCCGCGGTCGCCTCGGCCGG
TGCCGCGCTGGGACTCCCGC

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Subunit; ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase Sigma Factor SigJ; Sigma Factor; RNA Polymerase ECF-Subfamily Sigma Factor; RNA Polymerase Sigma Factor; Sigma-; ECF Subfamily RNA Polymerase Sigma Factor; RNA Polymerase Sigma-70 Factor ECF Subfamily; RNA Polymerase Sigma-70 Factor; ECF Family RNA Polymerase Sigma Factor; ECF-Sigma Factor; Sigma-70 Region 2 Domain-Containing Protein; Sigma Factor Sigma; RNA Polymerase Sigma Factor Sigma-70 Family; RNA Polymerase Sigma Factor Sigma-70 Family Protein; RNA Polymerase; ECF-Family Protein RNA Polymerase Sigma Factor; ECF Sigma Factor; AlteRNAtive RNA Polymerase Sigma Factor SigJ; Sigma-70 Family RNA Polymerase Sigma Factor; RNA Polymerase ECF-Type Sigma Factor; Sigma-70 Factor; ECF-Family RNA Polymerase Sigma Factor; RNA Polymerase Sigma Subunit; AlteRNAtive RNA Polymerase Sigma Factor; Sigma-70 Family RNA Polymerase; RNA Polymerase Sigma-24 Factor Protein; RNA Polymerase Sigma Subunit ECF Family; RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma-70 Factor Family; RNA Polymerase Sigma-70-Like Factor; ECF-Type Sigma Factor; RNA Polymerase Sigma-70 ECF Type; ECF Subfamily RNA Polymerase Sigma-; RNA Polymerase Sigma-70 Factor Protein; RNA Polymerase Sigma Factor Protein; DNA-Directed RNA Polymeracialized Sigma Subunit

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MSTTTEHAERFTLLRPLLFTIAYEILGSATESDDVLQESYLRWAEVDLDTVHDTKAYLAQLVTRQALNALRAQSRRREDY
IGPWLPEPLLVQSKDAEADVVLAESVSMAMLVVLETLTPDERAVFVLREVFGFSHDEIAAAVGKSTTAVRQMAHRAREHV
QSRRKRFEPVDPKTSTEITMRFFAAASTGDLDGLMELLAPDVVWTADSAGKRSAARRPVTGAERVGRLVLGLLRAAGEAG
RIEPAVYNNAPALKLFLGDSFEGIVTVEIVDGRISHFYAMRNPDKLVGVDVPREITRTV

Sequences:

>Translated_299_residues
MSTTTEHAERFTLLRPLLFTIAYEILGSATESDDVLQESYLRWAEVDLDTVHDTKAYLAQLVTRQALNALRAQSRRREDY
IGPWLPEPLLVQSKDAEADVVLAESVSMAMLVVLETLTPDERAVFVLREVFGFSHDEIAAAVGKSTTAVRQMAHRAREHV
QSRRKRFEPVDPKTSTEITMRFFAAASTGDLDGLMELLAPDVVWTADSAGKRSAARRPVTGAERVGRLVLGLLRAAGEAG
RIEPAVYNNAPALKLFLGDSFEGIVTVEIVDGRISHFYAMRNPDKLVGVDVPREITRTV
>Mature_298_residues
STTTEHAERFTLLRPLLFTIAYEILGSATESDDVLQESYLRWAEVDLDTVHDTKAYLAQLVTRQALNALRAQSRRREDYI
GPWLPEPLLVQSKDAEADVVLAESVSMAMLVVLETLTPDERAVFVLREVFGFSHDEIAAAVGKSTTAVRQMAHRAREHVQ
SRRKRFEPVDPKTSTEITMRFFAAASTGDLDGLMELLAPDVVWTADSAGKRSAARRPVTGAERVGRLVLGLLRAAGEAGR
IEPAVYNNAPALKLFLGDSFEGIVTVEIVDGRISHFYAMRNPDKLVGVDVPREITRTV

Specific function: Unknown

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33119; Mature: 32988

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTTEHAERFTLLRPLLFTIAYEILGSATESDDVLQESYLRWAEVDLDTVHDTKAYLAQ
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LVTRQALNALRAQSRRREDYIGPWLPEPLLVQSKDAEADVVLAESVSMAMLVVLETLTPD
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCEEEHHHHHHHHHHHHHHCCCC
ERAVFVLREVFGFSHDEIAAAVGKSTTAVRQMAHRAREHVQSRRKRFEPVDPKTSTEITM
HHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
RFFAAASTGDLDGLMELLAPDVVWTADSAGKRSAARRPVTGAERVGRLVLGLLRAAGEAG
HHHHCCCCCCHHHHHHHHCCCEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCC
RIEPAVYNNAPALKLFLGDSFEGIVTVEIVDGRISHFYAMRNPDKLVGVDVPREITRTV
CCCCHHCCCCCEEEEEECCCCCCEEEEEEECCHHHHHHEECCCCCEECCCCCHHHHHCC
>Mature Secondary Structure 
STTTEHAERFTLLRPLLFTIAYEILGSATESDDVLQESYLRWAEVDLDTVHDTKAYLAQ
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LVTRQALNALRAQSRRREDYIGPWLPEPLLVQSKDAEADVVLAESVSMAMLVVLETLTPD
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCEEEHHHHHHHHHHHHHHCCCC
ERAVFVLREVFGFSHDEIAAAVGKSTTAVRQMAHRAREHVQSRRKRFEPVDPKTSTEITM
HHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
RFFAAASTGDLDGLMELLAPDVVWTADSAGKRSAARRPVTGAERVGRLVLGLLRAAGEAG
HHHHCCCCCCHHHHHHHHCCCEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCC
RIEPAVYNNAPALKLFLGDSFEGIVTVEIVDGRISHFYAMRNPDKLVGVDVPREITRTV
CCCCHHCCCCCEEEEEECCCCCCEEEEEEECCHHHHHHEECCCCCEECCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA