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The map label for this gene is fecI [C]

Identifier: 119870384

GI number: 119870384

Start: 4575664

End: 4576563

Strand: Direct

Name: fecI [C]

Synonym: Mkms_4355

Alternate gene names: 119870384

Gene position: 4575664-4576563 (Clockwise)

Preceding gene: 119870383

Following gene: 119870385

Centisome position: 79.75

GC content: 70.44

Gene sequence:

>900_bases
GTGACCACCGAGCATGCCGAGCGATTCACGTCACTGCGACCGCTGCTGTTCACGATCGCCTACGAAATCCTCGGCAGCGC
AACCGAATCCGACGACGTACTGCAGGACAGCTTCCTGCGCTGGGCCGACGTGGACCTCGCGACGGTCCACGACACCCGGT
CCTACCTGGCGCAGTTGGTGACACGGCAGGCCCTCAACGCGGTGCGCACGAACGCCCGCCGCCGCGAGGACTACGTCGGA
CCCTGGCTGCCCGAGCCCCTGCTGGTCGACGACGGTGACGCCGCGTCGGACGTGGTGCTCGCCGAGTCGGTGTCGATGGC
GAGGCTGGTGGTGCTGGAGACGCTCACCCCCGACGAGCGGGCGGTGTTCGTCCTGCGCGAGGTGTTCGGGTTCGACCACG
CCGAGATCGCCGAAGCCGTCGGCAAGTCCGTGGGTGCGGTGCGCCAGATGGCGTACCGCGCCCGCGAACACGTGCACGCG
CGGCGCAAGCGGTTCGGGCCCGCCGACGCCGCCGACGCGGCGAAGGTCACCGAGCAGTTCATGACGGCCGCGGCCACCGG
CGACGTGGAGGGTCTGCTGGCGCTGCTCGCCCCGGACGCGGTGTGGATCACCGACAGCGGCGGACGCGCCAAGGCGATCC
GGCGGCCGGTGCTGGGCGCGAAGAAGGTGGCGGCCCTCATCGCAGGGTTCTTCCGGGCGGCACCGAAGCAGGTGCCGGAC
CTCCGACTGGAGACGGCGACCTACAACAACACCCCCGCGGTCCTGGTGCGCAGCGGCGACCGCGTGGAGGGGATGATCCT
GATCGACGTCGTCGACGGCCGGATCGCGAACTTCTACGCGATGGCCAACCCGGACAAACTGACCGGGATCGGCGTCGCCC
GGACGATCCGCCGTCAGTGA

Upstream 100 bases:

>100_bases
GGACGGTCTGGAGTCTGCGCCGCGAGGCCCGCAAACCCGGTTCGGCGTTCTGGCTCAAGGGTGGGCCGCGGCCCCGGGTG
GCCGAGTTGGTCGCAGAACC

Downstream 100 bases:

>100_bases
CCTGCAGCACATATCGCGCCGGAGTGTCACACTTCCGGTGTGCGTGGTGTCTCGAGGACAGACCGGCGACGGAGCCGGAT
GACCGAAGGAGACGAGAATG

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma Factor SigJ; ECF Subfamily RNA Polymerase Sigma-24 Factor; Sigma Factor; RNA Polymerase ECF-Subfamily Sigma Factor; Sigma-; ECF Subfamily RNA Polymerase Sigma Factor; RNA Polymerase Sigma-70 Factor ECF Subfamily; RNA Polymerase Sigma Factor; RNA Polymerase Sigma-70 Factor; ECF Family RNA Polymerase Sigma Factor; ECF-Sigma Factor; Sigma-70 Region 2 Domain-Containing Protein; RNA Polymerase Sigma Factor Sigma-70 Family; Sigma Factor Sigma; RNA Polymerase Sigma Factor Sigma-70 Family Protein; RNA Polymerase ECF-Type Sigma Factor; RNA Polymerase; ECF-Family Protein RNA Polymerase Sigma Factor; ECF Sigma Factor; AlteRNAtive RNA Polymerase Sigma Factor SigJ; Sigma-70 Family RNA Polymerase Sigma Factor; Sigma-70 Factor; DNA-Directed RNA Polymeracialized Sigma Subunit; RNA Polymerase Sigma Subunit; AlteRNAtive RNA Polymerase Sigma Factor; Sigma-70 Family RNA Polymerase; RNA Polymerase Sigma-24 Factor Protein; RNA Polymerase Sigma Subunit ECF Family; RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma-70-Like Factor; ECF-Type Sigma Factor; RNA Polymerase Sigma-70 ECF Type; ECF Subfamily RNA Polymerase Sigma-; RNA Polymerase Sigma-70 Factor Protein

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MTTEHAERFTSLRPLLFTIAYEILGSATESDDVLQDSFLRWADVDLATVHDTRSYLAQLVTRQALNAVRTNARRREDYVG
PWLPEPLLVDDGDAASDVVLAESVSMARLVVLETLTPDERAVFVLREVFGFDHAEIAEAVGKSVGAVRQMAYRAREHVHA
RRKRFGPADAADAAKVTEQFMTAAATGDVEGLLALLAPDAVWITDSGGRAKAIRRPVLGAKKVAALIAGFFRAAPKQVPD
LRLETATYNNTPAVLVRSGDRVEGMILIDVVDGRIANFYAMANPDKLTGIGVARTIRRQ

Sequences:

>Translated_299_residues
MTTEHAERFTSLRPLLFTIAYEILGSATESDDVLQDSFLRWADVDLATVHDTRSYLAQLVTRQALNAVRTNARRREDYVG
PWLPEPLLVDDGDAASDVVLAESVSMARLVVLETLTPDERAVFVLREVFGFDHAEIAEAVGKSVGAVRQMAYRAREHVHA
RRKRFGPADAADAAKVTEQFMTAAATGDVEGLLALLAPDAVWITDSGGRAKAIRRPVLGAKKVAALIAGFFRAAPKQVPD
LRLETATYNNTPAVLVRSGDRVEGMILIDVVDGRIANFYAMANPDKLTGIGVARTIRRQ
>Mature_298_residues
TTEHAERFTSLRPLLFTIAYEILGSATESDDVLQDSFLRWADVDLATVHDTRSYLAQLVTRQALNAVRTNARRREDYVGP
WLPEPLLVDDGDAASDVVLAESVSMARLVVLETLTPDERAVFVLREVFGFDHAEIAEAVGKSVGAVRQMAYRAREHVHAR
RKRFGPADAADAAKVTEQFMTAAATGDVEGLLALLAPDAVWITDSGGRAKAIRRPVLGAKKVAALIAGFFRAAPKQVPDL
RLETATYNNTPAVLVRSGDRVEGMILIDVVDGRIANFYAMANPDKLTGIGVARTIRRQ

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Regulates The Fec Genes For Iron Dicitrate Transport (Probable). [C]

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32668; Mature: 32536

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTEHAERFTSLRPLLFTIAYEILGSATESDDVLQDSFLRWADVDLATVHDTRSYLAQLV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
TRQALNAVRTNARRREDYVGPWLPEPLLVDDGDAASDVVLAESVSMARLVVLETLTPDER
HHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH
AVFVLREVFGFDHAEIAEAVGKSVGAVRQMAYRAREHVHARRKRFGPADAADAAKVTEQF
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
MTAAATGDVEGLLALLAPDAVWITDSGGRAKAIRRPVLGAKKVAALIAGFFRAAPKQVPD
HHHHHCCCHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC
LRLETATYNNTPAVLVRSGDRVEGMILIDVVDGRIANFYAMANPDKLTGIGVARTIRRQ
CEEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCHHEEEECCCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
TTEHAERFTSLRPLLFTIAYEILGSATESDDVLQDSFLRWADVDLATVHDTRSYLAQLV
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
TRQALNAVRTNARRREDYVGPWLPEPLLVDDGDAASDVVLAESVSMARLVVLETLTPDER
HHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH
AVFVLREVFGFDHAEIAEAVGKSVGAVRQMAYRAREHVHARRKRFGPADAADAAKVTEQF
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
MTAAATGDVEGLLALLAPDAVWITDSGGRAKAIRRPVLGAKKVAALIAGFFRAAPKQVPD
HHHHHCCCHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC
LRLETATYNNTPAVLVRSGDRVEGMILIDVVDGRIANFYAMANPDKLTGIGVARTIRRQ
CEEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCHHEEEECCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA