| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is cmr [C]
Identifier: 119870161
GI number: 119870161
Start: 4362904
End: 4364136
Strand: Direct
Name: cmr [C]
Synonym: Mkms_4131
Alternate gene names: 119870161
Gene position: 4362904-4364136 (Clockwise)
Preceding gene: 119870160
Following gene: 119870164
Centisome position: 76.05
GC content: 72.1
Gene sequence:
>1233_bases ATGTCCCACACTCGGCGCGAAGCCGTTGTCGACCGTCCCCTACCGTCGGATGCCGTGTTGCGTCCCCTGAGCCGATACGC CTTCGCGTTGCTGGCCTACGCGTTCGCGGTCACCATGGTCGGCACCACGGTGCCCACTCCGCTCTACGCCCTCTACGCCG ACCGGATGGACTTCGCGGTGTTGACCACCACGGTCATCTATGCGGCGTACGCCGGCGGCGTGCTGGTCGCACTGCTGGCC TTCGGGCGGTGGTCGGACGCCGTCGGCCGACGCCCGATGCTGTTGGCCGGTGTGGGGTTCGCGATCGCCAGCGCGCTGGT GTTCCTGGTCGCCGATTCGGTGGCGGTGTTGCTGGTCGGGCGGGTGCTGTCCGGTCTGTCGGCGGGCGTCTTCACCGGGA CGGGAACGGCGGCCGTCATCGAGGCCGCCCCGCAGCGCTGGCGCTCCCGGGCGGCCGCGGTGGCCACGGTCGCCAACATC GGCGGACTGGGCGCGGGCCCGTTGCTCGCCGGCCTGCTCGTCCAGTACGCACCGCAGCCCCTGGATCTGGTGTTCGCCGT CCACATCGCGATGGCGGTGCTGGCCGGTGTCGCGGTGTTCGTCGTCCCCGAGACCTCACCGCGCAGCGGCCGCATCGGGC TGCAGCGGCTCTCGGTTCCGCCCGAGGCGCGGTCGGTGTTCGTGATCGCCGCCCTGGCGGCCTTCGCCGGCTTCGCGGTC ACCGGGTTGTTCACCGCCGTGGCGCCGTCGTTCCTCGCCGACGTCGTCGGCATCGAGAACCATGCGGTGGCAGGCGCGAT CGCCTGCTCGATCTTCGCCGCCTCGGCCGTCACCCAGGTGGCCGCCAACCGGGTCGCCCCGTCGCGGGCGGTGGCCGCCG GTTGCGCCATCCTCGTGGCCGGGATGGCGGTTCTGGCTGTGGCGCTGCACTTCTCGTCGCTGCCGGGTCTCATCGCCGCG GCGGTGATCGCCGGTGTCGGTCAGGGGATGAGTTTCAGTCGCGGGCTGGCCGCGGTCGCCGAACGCACCCCACCCGAGCG GCGCGCCGAGGTCAACTCCACCTACTTCGTCGTCGCCTACGTGGCGATCTCGCTGCCGGTGATCGGTGAGGGTCTGGCCG CGCAGGCGGTGGGGTTGCAGACCGCGGGCGTGGGCTTCGCGCTCGCCGTCGCGGCGCTCGCCACGGTGTGCCTGATCGCC ATCCTGTTGCGGGAGAGGACCCGCGTGGGTTAG
Upstream 100 bases:
>100_bases GCGGAAAAGGCCGTCTCGCACTGAGGCCGGCCCGCTGAGCCCAGGACGTCTCGCGCCGGGTGTGTGAATAACGAGGCCGC CGAACGGCGTTGCACCTCGC
Downstream 100 bases:
>100_bases CCGCTCTTACGGCGGAATTCGCGGCGGTTCTCCACCGGGCCGTGGCCGTGCGCCTTGGCCTGCTGCGGTCCGCCCTTGCG CTGACCCGCGGAGTCCGTCG
Product: major facilitator superfamily transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Multidrug Resistance Protein; Multi-Drug Efflux Transporter; Facilitator Superfamily Transporter Permease; Facilitator Superfamily Transporter; Facilitator Superfamily; Facilitator Superfamily Multidrug Efflux Transporter; Permease Of Facilitator Superfamily; Drug Efflux Protein; Facilitator Family Transporter; Multidrug ABC Transporter; Drug Resistance Efflux Protein; Multidrug Efflux Protein
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MSHTRREAVVDRPLPSDAVLRPLSRYAFALLAYAFAVTMVGTTVPTPLYALYADRMDFAVLTTTVIYAAYAGGVLVALLA FGRWSDAVGRRPMLLAGVGFAIASALVFLVADSVAVLLVGRVLSGLSAGVFTGTGTAAVIEAAPQRWRSRAAAVATVANI GGLGAGPLLAGLLVQYAPQPLDLVFAVHIAMAVLAGVAVFVVPETSPRSGRIGLQRLSVPPEARSVFVIAALAAFAGFAV TGLFTAVAPSFLADVVGIENHAVAGAIACSIFAASAVTQVAANRVAPSRAVAAGCAILVAGMAVLAVALHFSSLPGLIAA AVIAGVGQGMSFSRGLAAVAERTPPERRAEVNSTYFVVAYVAISLPVIGEGLAAQAVGLQTAGVGFALAVAALATVCLIA ILLRERTRVG
Sequences:
>Translated_410_residues MSHTRREAVVDRPLPSDAVLRPLSRYAFALLAYAFAVTMVGTTVPTPLYALYADRMDFAVLTTTVIYAAYAGGVLVALLA FGRWSDAVGRRPMLLAGVGFAIASALVFLVADSVAVLLVGRVLSGLSAGVFTGTGTAAVIEAAPQRWRSRAAAVATVANI GGLGAGPLLAGLLVQYAPQPLDLVFAVHIAMAVLAGVAVFVVPETSPRSGRIGLQRLSVPPEARSVFVIAALAAFAGFAV TGLFTAVAPSFLADVVGIENHAVAGAIACSIFAASAVTQVAANRVAPSRAVAAGCAILVAGMAVLAVALHFSSLPGLIAA AVIAGVGQGMSFSRGLAAVAERTPPERRAEVNSTYFVVAYVAISLPVIGEGLAAQAVGLQTAGVGFALAVAALATVCLIA ILLRERTRVG >Mature_409_residues SHTRREAVVDRPLPSDAVLRPLSRYAFALLAYAFAVTMVGTTVPTPLYALYADRMDFAVLTTTVIYAAYAGGVLVALLAF GRWSDAVGRRPMLLAGVGFAIASALVFLVADSVAVLLVGRVLSGLSAGVFTGTGTAAVIEAAPQRWRSRAAAVATVANIG GLGAGPLLAGLLVQYAPQPLDLVFAVHIAMAVLAGVAVFVVPETSPRSGRIGLQRLSVPPEARSVFVIAALAAFAGFAVT GLFTAVAPSFLADVVGIENHAVAGAIACSIFAASAVTQVAANRVAPSRAVAAGCAILVAGMAVLAVALHFSSLPGLIAAA VIAGVGQGMSFSRGLAAVAERTPPERRAEVNSTYFVVAYVAISLPVIGEGLAAQAVGLQTAGVGFALAVAALATVCLIAI LLRERTRVG
Specific function: Efflux Pump Driven By The Proton Motive Force. Confers Resistance To Basic, Aromatic And Lipophilic Drugs As Well As Neutral, Non-Aromatic, Zwitterionic Or Nonaromatic Hydrophilic Antibiotics. [C]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41499; Mature: 41368
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHTRREAVVDRPLPSDAVLRPLSRYAFALLAYAFAVTMVGTTVPTPLYALYADRMDFAV CCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LTTTVIYAAYAGGVLVALLAFGRWSDAVGRRPMLLAGVGFAIASALVFLVADSVAVLLVG HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVLSGLSAGVFTGTGTAAVIEAAPQRWRSRAAAVATVANIGGLGAGPLLAGLLVQYAPQP HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCH LDLVFAVHIAMAVLAGVAVFVVPETSPRSGRIGLQRLSVPPEARSVFVIAALAAFAGFAV HHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHH TGLFTAVAPSFLADVVGIENHAVAGAIACSIFAASAVTQVAANRVAPSRAVAAGCAILVA HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH GMAVLAVALHFSSLPGLIAAAVIAGVGQGMSFSRGLAAVAERTPPERRAEVNSTYFVVAY HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHCCCHHHHHHH VAISLPVIGEGLAAQAVGLQTAGVGFALAVAALATVCLIAILLRERTRVG HHHHHHHHCCCHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SHTRREAVVDRPLPSDAVLRPLSRYAFALLAYAFAVTMVGTTVPTPLYALYADRMDFAV CCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LTTTVIYAAYAGGVLVALLAFGRWSDAVGRRPMLLAGVGFAIASALVFLVADSVAVLLVG HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVLSGLSAGVFTGTGTAAVIEAAPQRWRSRAAAVATVANIGGLGAGPLLAGLLVQYAPQP HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCH LDLVFAVHIAMAVLAGVAVFVVPETSPRSGRIGLQRLSVPPEARSVFVIAALAAFAGFAV HHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHH TGLFTAVAPSFLADVVGIENHAVAGAIACSIFAASAVTQVAANRVAPSRAVAAGCAILVA HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH GMAVLAVALHFSSLPGLIAAAVIAGVGQGMSFSRGLAAVAERTPPERRAEVNSTYFVVAY HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHCCCHHHHHHH VAISLPVIGEGLAAQAVGLQTAGVGFALAVAALATVCLIAILLRERTRVG HHHHHHHHCCCHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA