| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119870127
Identifier: 119870127
GI number: 119870127
Start: 4321697
End: 4323433
Strand: Direct
Name: 119870127
Synonym: Mkms_4097
Alternate gene names: NA
Gene position: 4321697-4323433 (Clockwise)
Preceding gene: 119870126
Following gene: 119870128
Centisome position: 75.33
GC content: 69.6
Gene sequence:
>1737_bases GTGTCAGACCCGTCTGTCAGAATCGAAGACATGTTCGATGGTTCGTTGCCCGGGATCGGCGACTTCTCCGCGCTCAGTGA CGCGGAGTTGGTGGCCGCCTCGGCCGGCTGGGGACGCGCCGAAAACGCGGCCACCGCCCGCAAACTGGCCGCCATGGCCG AACTGTTCCGCCGCCGCACCGGCTGCGACACCGCCACCGACCGCCACAACTGGTTCGTCGACCCCGACGCCAACGCCGTC AGCGAACTGGCCGCCGCCCACAACATCACCGAACGCCTGGCCATGTTCCAAACCCACCGCGCCGTCGCCCTGGCCGACCG ACTCCCCCACGTCGCCGCCCTGTTCACCGCCGGACTGATCACCGACCTGCTGGTCCGCGCCATCGTGACCCGCACCGCCC TGATCACCGACCCCACCCTGATGGCCGCCGTCGACACCGACCTGGCCGCCCAGATCACCAGCTGGGGACCCCAATCAGAA AAGAAAACCCTCGCCGCCATCGACGCCATCGTCGAAACCCACGACCCCGGCGCGCTACGGCGGGTCAAAGACGCCGAAAA CGACCGCGGCCTGCAATTCGGCTTCATCAGCGACGCCGCCGGCTTCATGACCGTCTGGGCCCGCATGTACGCCCCCGACG GCGCCGCCTTCGAACAACGCGTCACCGACATGGCCCACACCGTCTGCGACGAGGACCCCCGCACCGCCGACGAACGCCGC AACGACGCCCTGGCCGCCGTCGCCACCGGCACCCACCTACGCTGCGAATGCCCCAACCCCGACTGCCCCGGCCACCGCGA CACACAACCCACCAAAGACGTCGTCGTCCACATCGTCACCACCGAAGAAACACTCGACGCCGCCCGCACCCAAACCGAAA CGCAGCCCGAACCGGAGCCCGAGCCCGAAGAGGAGGCGCAGCCGGAGCCGGAGGCGCAAGCTGAGACTGAGCCCGAGCCC GAGCCCGAAGACGAGGCGCAGCCGGAGCCGGAGGCGCAAGCTGAGACTGAGCCCGAGCCCGAGCCCGAAGACGAGGCGCA GCCGGAGCCGGAGGCGGAACCGCAAGCGGAGACTGAGCCAGCGCCCGAGCCGGAAGCGGAAGCGGCGGCCACGCTCACCC CGCAGCAGTCAGCCTGCCGCGCACCGGCATTCGTCATCGGCGCCGGAGTCACCAACCCCACCGTGCTCGCCAACTTCCTC CACCGCGCCCGCCTCCGCACCATCCAGCACCCCGGCAACGCGGCACCCGAACCCCACTACCGACCCTCGGCAGCCCTGCA GGACTTCGTGCGCTGCCGCGACCTCACCTGCCGCTTCCCCGGCTGCGACGCCCCGGCCACCCGCTGCGACATCGACCACA CCGCGCCCTGGCCGGCCGGACCGACCTGCGCCGCCAACCTCAAATGCCTCTGCCGAAAACACCACCTGCTCAAAACCTTC TGGACCGGTGAAAACGGTTGGTGCGACCAACAGTTCACCGACGCCACCATCGTGTGGACCTCCCCGAGCGGGCAGACCTA CACCACCCGCCCCGGCAGCGCGCTGCTGTTCCCCACCCTGTGCACCCCGACCGCCGACGCGCCGATCCAACCCACCAAAG ACACCACCACCGACCGCGGCCTCAAAATGCCCAAACGCCGCCGCACCCGCGCCCAAAACCGCGCCCGCCGCATCCAAGAA GAACGCCGACTCAACGACGACCTCGTCGCCGAACGCAACAAACCACCCCCGTTCTGA
Upstream 100 bases:
>100_bases GTACGGGATGCTGCTGCTTCGGGAGCGCTTACTCGGCTGAGTCATCCCGGTTGTCCCCAGCGGCGAATTCATCCACAGGC GTGGGGTTTTCGGGGGTTGC
Downstream 100 bases:
>100_bases GGTTCGGCGATGACTTACACCCGGCCGCCGGGTCATATCGGTATGAGCACCGAGACAACGATCCGCCAGCTGATCACCCG ATGGGTCGACGCCGTCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 578; Mature: 577
Protein sequence:
>578_residues MSDPSVRIEDMFDGSLPGIGDFSALSDAELVAASAGWGRAENAATARKLAAMAELFRRRTGCDTATDRHNWFVDPDANAV SELAAAHNITERLAMFQTHRAVALADRLPHVAALFTAGLITDLLVRAIVTRTALITDPTLMAAVDTDLAAQITSWGPQSE KKTLAAIDAIVETHDPGALRRVKDAENDRGLQFGFISDAAGFMTVWARMYAPDGAAFEQRVTDMAHTVCDEDPRTADERR NDALAAVATGTHLRCECPNPDCPGHRDTQPTKDVVVHIVTTEETLDAARTQTETQPEPEPEPEEEAQPEPEAQAETEPEP EPEDEAQPEPEAQAETEPEPEPEDEAQPEPEAEPQAETEPAPEPEAEAAATLTPQQSACRAPAFVIGAGVTNPTVLANFL HRARLRTIQHPGNAAPEPHYRPSAALQDFVRCRDLTCRFPGCDAPATRCDIDHTAPWPAGPTCAANLKCLCRKHHLLKTF WTGENGWCDQQFTDATIVWTSPSGQTYTTRPGSALLFPTLCTPTADAPIQPTKDTTTDRGLKMPKRRRTRAQNRARRIQE ERRLNDDLVAERNKPPPF
Sequences:
>Translated_578_residues MSDPSVRIEDMFDGSLPGIGDFSALSDAELVAASAGWGRAENAATARKLAAMAELFRRRTGCDTATDRHNWFVDPDANAV SELAAAHNITERLAMFQTHRAVALADRLPHVAALFTAGLITDLLVRAIVTRTALITDPTLMAAVDTDLAAQITSWGPQSE KKTLAAIDAIVETHDPGALRRVKDAENDRGLQFGFISDAAGFMTVWARMYAPDGAAFEQRVTDMAHTVCDEDPRTADERR NDALAAVATGTHLRCECPNPDCPGHRDTQPTKDVVVHIVTTEETLDAARTQTETQPEPEPEPEEEAQPEPEAQAETEPEP EPEDEAQPEPEAQAETEPEPEPEDEAQPEPEAEPQAETEPAPEPEAEAAATLTPQQSACRAPAFVIGAGVTNPTVLANFL HRARLRTIQHPGNAAPEPHYRPSAALQDFVRCRDLTCRFPGCDAPATRCDIDHTAPWPAGPTCAANLKCLCRKHHLLKTF WTGENGWCDQQFTDATIVWTSPSGQTYTTRPGSALLFPTLCTPTADAPIQPTKDTTTDRGLKMPKRRRTRAQNRARRIQE ERRLNDDLVAERNKPPPF >Mature_577_residues SDPSVRIEDMFDGSLPGIGDFSALSDAELVAASAGWGRAENAATARKLAAMAELFRRRTGCDTATDRHNWFVDPDANAVS ELAAAHNITERLAMFQTHRAVALADRLPHVAALFTAGLITDLLVRAIVTRTALITDPTLMAAVDTDLAAQITSWGPQSEK KTLAAIDAIVETHDPGALRRVKDAENDRGLQFGFISDAAGFMTVWARMYAPDGAAFEQRVTDMAHTVCDEDPRTADERRN DALAAVATGTHLRCECPNPDCPGHRDTQPTKDVVVHIVTTEETLDAARTQTETQPEPEPEPEEEAQPEPEAQAETEPEPE PEDEAQPEPEAQAETEPEPEPEDEAQPEPEAEPQAETEPAPEPEAEAAATLTPQQSACRAPAFVIGAGVTNPTVLANFLH RARLRTIQHPGNAAPEPHYRPSAALQDFVRCRDLTCRFPGCDAPATRCDIDHTAPWPAGPTCAANLKCLCRKHHLLKTFW TGENGWCDQQFTDATIVWTSPSGQTYTTRPGSALLFPTLCTPTADAPIQPTKDTTTDRGLKMPKRRRTRAQNRARRIQEE RRLNDDLVAERNKPPPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv3776 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003870 - InterPro: IPR003615 [H]
Pfam domain/function: PF02720 DUF222 [H]
EC number: NA
Molecular weight: Translated: 63142; Mature: 63011
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPSVRIEDMFDGSLPGIGDFSALSDAELVAASAGWGRAENAATARKLAAMAELFRRRT CCCCCEEEHHHCCCCCCCCCCHHHCCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHC GCDTATDRHNWFVDPDANAVSELAAAHNITERLAMFQTHRAVALADRLPHVAALFTAGLI CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH TDLLVRAIVTRTALITDPTLMAAVDTDLAAQITSWGPQSEKKTLAAIDAIVETHDPGALR HHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHH RVKDAENDRGLQFGFISDAAGFMTVWARMYAPDGAAFEQRVTDMAHTVCDEDPRTADERR HHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH NDALAAVATGTHLRCECPNPDCPGHRDTQPTKDVVVHIVTTEETLDAARTQTETQPEPEP CCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHCCCCCCCCC EPEEEAQPEPEAQAETEPEPEPEDEAQPEPEAQAETEPEPEPEDEAQPEPEAEPQAETEP CCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APEPEAEAAATLTPQQSACRAPAFVIGAGVTNPTVLANFLHRARLRTIQHPGNAAPEPHY CCCCCCCCCEECCCCHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC RPSAALQDFVRCRDLTCRFPGCDAPATRCDIDHTAPWPAGPTCAANLKCLCRKHHLLKTF CCHHHHHHHHHHHHCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHE WTGENGWCDQQFTDATIVWTSPSGQTYTTRPGSALLFPTLCTPTADAPIQPTKDTTTDRG ECCCCCCCCCCCCCEEEEEECCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCC LKMPKRRRTRAQNRARRIQEERRLNDDLVAERNKPPPF CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCC >Mature Secondary Structure SDPSVRIEDMFDGSLPGIGDFSALSDAELVAASAGWGRAENAATARKLAAMAELFRRRT CCCCEEEHHHCCCCCCCCCCHHHCCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHC GCDTATDRHNWFVDPDANAVSELAAAHNITERLAMFQTHRAVALADRLPHVAALFTAGLI CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH TDLLVRAIVTRTALITDPTLMAAVDTDLAAQITSWGPQSEKKTLAAIDAIVETHDPGALR HHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHH RVKDAENDRGLQFGFISDAAGFMTVWARMYAPDGAAFEQRVTDMAHTVCDEDPRTADERR HHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH NDALAAVATGTHLRCECPNPDCPGHRDTQPTKDVVVHIVTTEETLDAARTQTETQPEPEP CCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHCCCCCCCCC EPEEEAQPEPEAQAETEPEPEPEDEAQPEPEAQAETEPEPEPEDEAQPEPEAEPQAETEP CCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APEPEAEAAATLTPQQSACRAPAFVIGAGVTNPTVLANFLHRARLRTIQHPGNAAPEPHY CCCCCCCCCEECCCCHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC RPSAALQDFVRCRDLTCRFPGCDAPATRCDIDHTAPWPAGPTCAANLKCLCRKHHLLKTF CCHHHHHHHHHHHHCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHE WTGENGWCDQQFTDATIVWTSPSGQTYTTRPGSALLFPTLCTPTADAPIQPTKDTTTDRG ECCCCCCCCCCCCCEEEEEECCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCC LKMPKRRRTRAQNRARRIQEERRLNDDLVAERNKPPPF CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]