Definition Mycobacterium sp. KMS chromosome, complete genome.
Accession NC_008705
Length 5,737,227

Click here to switch to the map view.

The map label for this gene is 119870123

Identifier: 119870123

GI number: 119870123

Start: 4318896

End: 4319297

Strand: Direct

Name: 119870123

Synonym: Mkms_4093

Alternate gene names: NA

Gene position: 4318896-4319297 (Clockwise)

Preceding gene: 119870122

Following gene: 119870126

Centisome position: 75.28

GC content: 65.42

Gene sequence:

>402_bases
ATGAGTATCGCATTGTCCACCAGCCTGAAGACGAACTTCGACGACGCGGTGACCCGCACGCGGGAAGCGTTGTCGGAACA
GGGTTTCGGTGTGTTGACCGAGATCGACGTCAAGTCGACGCTGAAGGCCAAGCTCGACGAGGACATGGAGAACTACCTGA
TCCTCGGCGCCTGCAATCCCCCGCTGGCCCACCGTGCGATCGGCGTCGACCGGCAGATCGGCCTGCTCCTGCCGTGCAAC
GTGGTGGTGCGCAGCGATCCCGACGACCCGCAGACCACGCTGGTCGAGGCGATGAACCCACAGCTGCTCGTGGACGTCAC
CGGCGAACCGCAGCTGCAGCCGATCGCCGAAGACGTCACCAAACGGCTGCAGGCGGCGATCGACGCGCTGGCCGCCGGCT
GA

Upstream 100 bases:

>100_bases
AGGGTGCCGACGGGAGAGACCCGATGTCGGTCGCCGAGCTCGAGAAGTTGTTCCTCGCACTGGCCTGATACATCGACAAA
GGACGACAAAGGAGTCGTAG

Downstream 100 bases:

>100_bases
CGGCGCTTCAGCTCTGCGCAGCGAGCACGCAGAACTCGTTGCCCTCGGGGTCGGCCAGCACCACCCAGCTCTGCTCGCCC
TGCCCGATGTCAACGCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MSIALSTSLKTNFDDAVTRTREALSEQGFGVLTEIDVKSTLKAKLDEDMENYLILGACNPPLAHRAIGVDRQIGLLLPCN
VVVRSDPDDPQTTLVEAMNPQLLVDVTGEPQLQPIAEDVTKRLQAAIDALAAG

Sequences:

>Translated_133_residues
MSIALSTSLKTNFDDAVTRTREALSEQGFGVLTEIDVKSTLKAKLDEDMENYLILGACNPPLAHRAIGVDRQIGLLLPCN
VVVRSDPDDPQTTLVEAMNPQLLVDVTGEPQLQPIAEDVTKRLQAAIDALAAG
>Mature_132_residues
SIALSTSLKTNFDDAVTRTREALSEQGFGVLTEIDVKSTLKAKLDEDMENYLILGACNPPLAHRAIGVDRQIGLLLPCNV
VVRSDPDDPQTTLVEAMNPQLLVDVTGEPQLQPIAEDVTKRLQAAIDALAAG

Specific function: Unknown

COG id: COG3439

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14296; Mature: 14165

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIALSTSLKTNFDDAVTRTREALSEQGFGVLTEIDVKSTLKAKLDEDMENYLILGACNP
CCEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCEEEEECCCC
PLAHRAIGVDRQIGLLLPCNVVVRSDPDDPQTTLVEAMNPQLLVDVTGEPQLQPIAEDVT
CHHHHHCCCCCCCCEEECCEEEEECCCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHH
KRLQAAIDALAAG
HHHHHHHHHHHCC
>Mature Secondary Structure 
SIALSTSLKTNFDDAVTRTREALSEQGFGVLTEIDVKSTLKAKLDEDMENYLILGACNP
CEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCEEEEECCCC
PLAHRAIGVDRQIGLLLPCNVVVRSDPDDPQTTLVEAMNPQLLVDVTGEPQLQPIAEDVT
CHHHHHCCCCCCCCEEECCEEEEECCCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHH
KRLQAAIDALAAG
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA