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The map label for this gene is yagA [C]

Identifier: 119870041

GI number: 119870041

Start: 4230440

End: 4231441

Strand: Direct

Name: yagA [C]

Synonym: Mkms_4011

Alternate gene names: 119870041

Gene position: 4230440-4231441 (Clockwise)

Preceding gene: 119870040

Following gene: 119870044

Centisome position: 73.74

GC content: 64.97

Gene sequence:

>1002_bases
GTGGCTTGTCTAGGTCCATACCGTCCGGAGGTTCTCGTGTCCCACCGTAATGCTCGTACGACGTTTCATGGTCGGCTGTT
GATGGTGCGCCGCCATCAGGCCGGTTGGCCCAAGGCTCATATCGCCAGTGCGATGGGGGTGTCACGCAAGTGCGTGCACA
CCTGGATCAGCCGGTTCGAGGCCGACGGCGAGGCCGGGCTGATCGACCGCTCCTCGCGGCCCCACACCTCGCCAATGCGC
ACCGCGCAGCGGCTGGAGAACCAAATCGTGGCCTGGCGGCGCCGTCACCGTTGCGGCCCGGAGGAAATCGGCGCGAAGTT
GGGGGTGTCGGCTCGGACAGTGTCCCGGGTATTGCACCGCCGTGGTGCGCCCTACCTGCGGGATTGCGATCCGATGACCG
GACAGGTCATCCGCGCCTCAAAGTCCACGGCGGTGCGTTATGAGCGCGGCCGACCCGGCGAACTGGTCCACATGGACGTT
AAGAAATTGGGCCGTATCCCTGACGGCGGTGGCTGGCGAGCCCACGGTCGAGGCTGTGCACCTGACCGCAAGCGGTTGCG
CGGCAATGGATTCGACTACATCCACTCACTTGTCGACGATCACAGCCGGCTGGCGTACTCCGAAATCCTGCCCGACGAGA
AAGGCTCCACCTGCGCCGGGTTCCTCGAACGCGCAGCCCACTACTTCCGCGCCCACGGCATCACCACCATCGAGCAGGTC
ATGACCGACAACGCCTGGGCCTACCGGTATTCCCTGCGCGATGTCTGCACCCAGCTCGGTGCCCGCCAAATCTTCATCAG
GCCCCACTGCCCCTGGCAGAACGGCAAGGTAGAGCGGCTCAACCGAACCCTGCAGACCGAATGGGCCTACAAGCGGGTCT
TCACCTCCAATGCCCACCGCGCCGCCGCGCTTGCGCCCTGGCTCAAGCACTACAACACTCAACGCCGTCACAGTGCACTC
GGCGGCCTCCCACCGATCAGCCGACTGACACCAACCTCATGA

Upstream 100 bases:

>100_bases
GCCGCGCTGGTCACCTTCCACGTCCCCCGCTAGCTGTACCGAGACAGGACGTTGGTAGCGGGCGTGTTGGCTTGATGTGA
GGAGAACCTCCGGGTGGGGT

Downstream 100 bases:

>100_bases
CTCGGTACAGCTAGCGTGCGATTTCGGCGTGCGCGGTCGCGCTCAGCGCGACCCAGCACGCCGAAATCGCCCAGCTACGA
GTTGGTGGCGAGGGTGAGTT

Product: integrase catalytic subunit

Products: NA

Alternate protein names: Integrase Catalytic Region; Integrase Catalytic Subunit; Integrase Family Protein; Integrase Catalytic Domain-Containing Protein; Transposase For ISMyma; Integrase; Transposase For Tn; Insertion Element ISCmi2 Transposase; ISBm3 Transposase Programmed; Histidine Kinase; ISAca1 Transposase; Insertion Sequence Transposase Protein; Transposase ; Noncomposite Transposon Transposase; ISmav2-Like Transposase; Transposase Undefined; Insertion Element; Transposase Of; Transposase Integrase; LOW QUALITY PROTEIN Transposase ; ISBm3 Transposase Programmed Frameshift

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MACLGPYRPEVLVSHRNARTTFHGRLLMVRRHQAGWPKAHIASAMGVSRKCVHTWISRFEADGEAGLIDRSSRPHTSPMR
TAQRLENQIVAWRRRHRCGPEEIGAKLGVSARTVSRVLHRRGAPYLRDCDPMTGQVIRASKSTAVRYERGRPGELVHMDV
KKLGRIPDGGGWRAHGRGCAPDRKRLRGNGFDYIHSLVDDHSRLAYSEILPDEKGSTCAGFLERAAHYFRAHGITTIEQV
MTDNAWAYRYSLRDVCTQLGARQIFIRPHCPWQNGKVERLNRTLQTEWAYKRVFTSNAHRAAALAPWLKHYNTQRRHSAL
GGLPPISRLTPTS

Sequences:

>Translated_333_residues
MACLGPYRPEVLVSHRNARTTFHGRLLMVRRHQAGWPKAHIASAMGVSRKCVHTWISRFEADGEAGLIDRSSRPHTSPMR
TAQRLENQIVAWRRRHRCGPEEIGAKLGVSARTVSRVLHRRGAPYLRDCDPMTGQVIRASKSTAVRYERGRPGELVHMDV
KKLGRIPDGGGWRAHGRGCAPDRKRLRGNGFDYIHSLVDDHSRLAYSEILPDEKGSTCAGFLERAAHYFRAHGITTIEQV
MTDNAWAYRYSLRDVCTQLGARQIFIRPHCPWQNGKVERLNRTLQTEWAYKRVFTSNAHRAAALAPWLKHYNTQRRHSAL
GGLPPISRLTPTS
>Mature_332_residues
ACLGPYRPEVLVSHRNARTTFHGRLLMVRRHQAGWPKAHIASAMGVSRKCVHTWISRFEADGEAGLIDRSSRPHTSPMRT
AQRLENQIVAWRRRHRCGPEEIGAKLGVSARTVSRVLHRRGAPYLRDCDPMTGQVIRASKSTAVRYERGRPGELVHMDVK
KLGRIPDGGGWRAHGRGCAPDRKRLRGNGFDYIHSLVDDHSRLAYSEILPDEKGSTCAGFLERAAHYFRAHGITTIEQVM
TDNAWAYRYSLRDVCTQLGARQIFIRPHCPWQNGKVERLNRTLQTEWAYKRVFTSNAHRAAALAPWLKHYNTQRRHSALG
GLPPISRLTPTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786462, Length=302, Percent_Identity=27.1523178807947, Blast_Score=71, Evalue=9e-14,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37799; Mature: 37668

Theoretical pI: Translated: 11.26; Mature: 11.26

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MACLGPYRPEVLVSHRNARTTFHGRLLMVRRHQAGWPKAHIASAMGVSRKCVHTWISRFE
CCCCCCCCCCEEEECCCCCEEECCEEEEEEECCCCCCHHHHHHHHCHHHHHHHHHHHHHC
ADGEAGLIDRSSRPHTSPMRTAQRLENQIVAWRRRHRCGPEEIGAKLGVSARTVSRVLHR
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHH
RGAPYLRDCDPMTGQVIRASKSTAVRYERGRPGELVHMDVKKLGRIPDGGGWRAHGRGCA
CCCCCCCCCCCCCCHHEECCCHHHEEECCCCCCCEEEECHHHHCCCCCCCCCCCCCCCCC
PDRKRLRGNGFDYIHSLVDDHSRLAYSEILPDEKGSTCAGFLERAAHYFRAHGITTIEQV
CHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH
MTDNAWAYRYSLRDVCTQLGARQIFIRPHCPWQNGKVERLNRTLQTEWAYKRVFTSNAHR
HCCCCCEEHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH
AAALAPWLKHYNTQRRHSALGGLPPISRLTPTS
HHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
ACLGPYRPEVLVSHRNARTTFHGRLLMVRRHQAGWPKAHIASAMGVSRKCVHTWISRFE
CCCCCCCCCEEEECCCCCEEECCEEEEEEECCCCCCHHHHHHHHCHHHHHHHHHHHHHC
ADGEAGLIDRSSRPHTSPMRTAQRLENQIVAWRRRHRCGPEEIGAKLGVSARTVSRVLHR
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHH
RGAPYLRDCDPMTGQVIRASKSTAVRYERGRPGELVHMDVKKLGRIPDGGGWRAHGRGCA
CCCCCCCCCCCCCCHHEECCCHHHEEECCCCCCCEEEECHHHHCCCCCCCCCCCCCCCCC
PDRKRLRGNGFDYIHSLVDDHSRLAYSEILPDEKGSTCAGFLERAAHYFRAHGITTIEQV
CHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH
MTDNAWAYRYSLRDVCTQLGARQIFIRPHCPWQNGKVERLNRTLQTEWAYKRVFTSNAHR
HCCCCCEEHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH
AAALAPWLKHYNTQRRHSALGGLPPISRLTPTS
HHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA