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The map label for this gene is glgB [H]

Identifier: 119869965

GI number: 119869965

Start: 4142569

End: 4144848

Strand: Direct

Name: glgB [H]

Synonym: Mkms_3935

Alternate gene names: 119869965

Gene position: 4142569-4144848 (Clockwise)

Preceding gene: 119869964

Following gene: 119869969

Centisome position: 72.21

GC content: 68.42

Gene sequence:

>2280_bases
ATGGCCAAGACAAAAGGACTGCCGAAAGACACCGCGGTGACCCCCAGCCCGCATCTGCGGCCGCACACCGCCGACCTGAA
CCGGTTGCTCGCCGGTGAGCACCACGACCCGCATTCGATCCTCGGGGCGCACGAATACGACGACCACACGGTGATCCGGG
CGTACCGTCCGCACGCGACCGAGGTCGCGGCCGTCGTCGGCGGCGAACGCCACGTGTTCACCCACCTCGAGGCCGGCGTG
TTCGCGGTGACGCTGCCGTTCACCGGCCTGATCGACTACCGCCTCGAGGTCGGCTACGACCACGGCGGCGACCAGCCGCA
CATCCACCACACCGCCGACGCGTACCGGTTCCTGCCCACGCTGGGCGAGATGGACCTGCACCTGTTCTCCGAGGGGCGCC
ACGAACGGTTGTGGGAGGTGCTCGGGGCGCATCCGCGCACCTTCGAAACCCCCGACGGCGTCGTCGAAGGCGTCTCGTTC
GCCGTCTGGGCGCCCAACGCCAACGGTGTGCAGCTGATCGGCGACTTCAACCACTGGGACGGCAACGAGGCGCAGCTGCG
CGTCCTCGGTTCGACCGGGGTGTGGGAGCTGTTCTGGCCGGACTTCCCGGTCGACGGGCTCTACAAGTTCCGCATCCACG
GCGCCGACGGCGTGGTGAGCGAGCGGGCCGACCCGATGGCCTTCGCGACCGAGGTGCCGCCGCAGACCGCATCGCGGGTC
ACCACGAGCAGCTACACGTGGAACGACGACGCGTGGATGACGCAGCGCGCCGCCCAGAACCCGGTGTTCGAGCCGATGAG
CACCCTCGAGGTGCACCTCATGTCGTGGCGGCCCGGCCTGTCGTACGTGGAGTTGGCCGATCAGCTGACCGAGTACATCG
TCGAGCACGGGTTCACCCATGTCGAGATGCTGCCGGTGGCCGAGCACCCGTTCGGGGGTTCGTGGGGTTACCAGGTCACG
TCGTACTACGCGCCGACCTCGCGCCTGGGCACCCCCGACGAGTTCCGCTACCTCGTCGACCGACTGCACCAGGCCGGCAT
CGGGGTGATCGTCGACTGGGTGCCCGCGCACTTCCCGAAGGACGCGTGGGCGCTGGGCCGGTTCGACGGCACCGCACTCT
ACGAACACGCCGACCCCCGCCGCGGTGAACAGTTGGACTGGGGCACATACGTCTTCGACTTCGGCCGGGCCGAGGTGCGC
AACTTCCTGGTCGCCAACGCGCTGTACTGGCTGCAGGAGTTCCACGTCGACGGACTACGCGTGGACGCCGTCGCCTCGAT
GCTCTACCTGGACTACTCGCGGCCCGAGGGCGGCTGGACGCCGAACATCTACGGCGGCCGCGAGAACCTCGAGGCGGTGC
AGTTCCTCCAGGAGATGAACGCCACCGTGCACAAGGCCAGTCCGGGCATCGTGACGATCGCCGAGGAGTCGACGTCGTGG
CCCGGCGTGACCCGTCCGACCAATCTGGGCGGGCTGGGCTTCTCGATGAAGTGGAACATGGGCTGGATGAACGACACGTT
GGCGTTCATCAGCCGCGACCCCATCCACCGCAGCTACCACCACCACGAGATGACGTTCTCGATGCTCTACGCGTTCAGCG
AGAACTACGTGCTGCCGATCAGCCACGACGAGGTGGTGCACGGTAAGGGCACGCTGTGGGGCCGGATGCTCGGCGACGAC
CACCGCAAGGCCGCGGGCGTGCGGCAGCTGCTGGCCTACCAGTGGGCGCACCCCGGTAAGCAGTTGCTGTTCCAGGGCCA
GGAGTTCGGCCAGCGCGCGGAGTGGTCGGAGGAGCGGGGCGTCGACTGGTACCAACTCGACGAGAACAGCTACTCGGGCG
GCATCCTGCGGATGATCTCCGACATGAACGGGATCTACACCAGCCACCGGGCGCTGTGGTCACACGACACCAGCCCGGAG
GGGTACTCGTGGATCGACGCCAACGACTCGACGAACAACGTACTGAGCTTCCTGCGCTACGGCGACGACGGTTCGGTGCT
GGCGTGTGTGTTCAACTTCTCCGGCTCCGAGCACAGCCAGTACCGGCTGGGCCTGCCGCACGCCGGGACGTGGCGTGAGG
TGCTCAACACCGACGCGGCCGACTACAACGGCGCGGGCATCGGCAACTACGGGGCGGTGCAGGCCACCGACGAGCCGTGG
CACGGCCGGCCCGCCTCGGCGGTGATGGTGCTGCCGCCGCTGTCGGCGCTGTGGTTCGAGCCGGTGGCCGCCGAGGCGCC
CGTCGTCCAGGAGCCCCCGACTGCGCCGCCGCTGTCCTGA

Upstream 100 bases:

>100_bases
TGCGCATCGAACCGGCGAAGGCGGTCGCGCACGTGCTCAACATGCCCCAGGTGCCCGCCGACCAACGCCTCAACCTACTG
CGTAGGGAGTGAACACACGC

Downstream 100 bases:

>100_bases
CGGCGCTCAGTACAGGGCGTTGGCGAGCTTGCGCCGGCCCGCGATGACCTCGGGATCGGCCGGGTCGAAGAGCTCGAACA
GCTCGATGAGCCGGGTTCGC

Product: glycogen branching enzyme

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE [H]

Number of amino acids: Translated: 759; Mature: 758

Protein sequence:

>759_residues
MAKTKGLPKDTAVTPSPHLRPHTADLNRLLAGEHHDPHSILGAHEYDDHTVIRAYRPHATEVAAVVGGERHVFTHLEAGV
FAVTLPFTGLIDYRLEVGYDHGGDQPHIHHTADAYRFLPTLGEMDLHLFSEGRHERLWEVLGAHPRTFETPDGVVEGVSF
AVWAPNANGVQLIGDFNHWDGNEAQLRVLGSTGVWELFWPDFPVDGLYKFRIHGADGVVSERADPMAFATEVPPQTASRV
TTSSYTWNDDAWMTQRAAQNPVFEPMSTLEVHLMSWRPGLSYVELADQLTEYIVEHGFTHVEMLPVAEHPFGGSWGYQVT
SYYAPTSRLGTPDEFRYLVDRLHQAGIGVIVDWVPAHFPKDAWALGRFDGTALYEHADPRRGEQLDWGTYVFDFGRAEVR
NFLVANALYWLQEFHVDGLRVDAVASMLYLDYSRPEGGWTPNIYGGRENLEAVQFLQEMNATVHKASPGIVTIAEESTSW
PGVTRPTNLGGLGFSMKWNMGWMNDTLAFISRDPIHRSYHHHEMTFSMLYAFSENYVLPISHDEVVHGKGTLWGRMLGDD
HRKAAGVRQLLAYQWAHPGKQLLFQGQEFGQRAEWSEERGVDWYQLDENSYSGGILRMISDMNGIYTSHRALWSHDTSPE
GYSWIDANDSTNNVLSFLRYGDDGSVLACVFNFSGSEHSQYRLGLPHAGTWREVLNTDAADYNGAGIGNYGAVQATDEPW
HGRPASAVMVLPPLSALWFEPVAAEAPVVQEPPTAPPLS

Sequences:

>Translated_759_residues
MAKTKGLPKDTAVTPSPHLRPHTADLNRLLAGEHHDPHSILGAHEYDDHTVIRAYRPHATEVAAVVGGERHVFTHLEAGV
FAVTLPFTGLIDYRLEVGYDHGGDQPHIHHTADAYRFLPTLGEMDLHLFSEGRHERLWEVLGAHPRTFETPDGVVEGVSF
AVWAPNANGVQLIGDFNHWDGNEAQLRVLGSTGVWELFWPDFPVDGLYKFRIHGADGVVSERADPMAFATEVPPQTASRV
TTSSYTWNDDAWMTQRAAQNPVFEPMSTLEVHLMSWRPGLSYVELADQLTEYIVEHGFTHVEMLPVAEHPFGGSWGYQVT
SYYAPTSRLGTPDEFRYLVDRLHQAGIGVIVDWVPAHFPKDAWALGRFDGTALYEHADPRRGEQLDWGTYVFDFGRAEVR
NFLVANALYWLQEFHVDGLRVDAVASMLYLDYSRPEGGWTPNIYGGRENLEAVQFLQEMNATVHKASPGIVTIAEESTSW
PGVTRPTNLGGLGFSMKWNMGWMNDTLAFISRDPIHRSYHHHEMTFSMLYAFSENYVLPISHDEVVHGKGTLWGRMLGDD
HRKAAGVRQLLAYQWAHPGKQLLFQGQEFGQRAEWSEERGVDWYQLDENSYSGGILRMISDMNGIYTSHRALWSHDTSPE
GYSWIDANDSTNNVLSFLRYGDDGSVLACVFNFSGSEHSQYRLGLPHAGTWREVLNTDAADYNGAGIGNYGAVQATDEPW
HGRPASAVMVLPPLSALWFEPVAAEAPVVQEPPTAPPLS
>Mature_758_residues
AKTKGLPKDTAVTPSPHLRPHTADLNRLLAGEHHDPHSILGAHEYDDHTVIRAYRPHATEVAAVVGGERHVFTHLEAGVF
AVTLPFTGLIDYRLEVGYDHGGDQPHIHHTADAYRFLPTLGEMDLHLFSEGRHERLWEVLGAHPRTFETPDGVVEGVSFA
VWAPNANGVQLIGDFNHWDGNEAQLRVLGSTGVWELFWPDFPVDGLYKFRIHGADGVVSERADPMAFATEVPPQTASRVT
TSSYTWNDDAWMTQRAAQNPVFEPMSTLEVHLMSWRPGLSYVELADQLTEYIVEHGFTHVEMLPVAEHPFGGSWGYQVTS
YYAPTSRLGTPDEFRYLVDRLHQAGIGVIVDWVPAHFPKDAWALGRFDGTALYEHADPRRGEQLDWGTYVFDFGRAEVRN
FLVANALYWLQEFHVDGLRVDAVASMLYLDYSRPEGGWTPNIYGGRENLEAVQFLQEMNATVHKASPGIVTIAEESTSWP
GVTRPTNLGGLGFSMKWNMGWMNDTLAFISRDPIHRSYHHHEMTFSMLYAFSENYVLPISHDEVVHGKGTLWGRMLGDDH
RKAAGVRQLLAYQWAHPGKQLLFQGQEFGQRAEWSEERGVDWYQLDENSYSGGILRMISDMNGIYTSHRALWSHDTSPEG
YSWIDANDSTNNVLSFLRYGDDGSVLACVFNFSGSEHSQYRLGLPHAGTWREVLNTDAADYNGAGIGNYGAVQATDEPWH
GRPASAVMVLPPLSALWFEPVAAEAPVVQEPPTAPPLS

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position [H]

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=660, Percent_Identity=26.5151515151515, Blast_Score=166, Evalue=8e-41,
Organism=Escherichia coli, GI1789839, Length=726, Percent_Identity=45.5922865013774, Blast_Score=627, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17554896, Length=634, Percent_Identity=25.0788643533123, Blast_Score=169, Evalue=4e-42,
Organism=Caenorhabditis elegans, GI32564391, Length=494, Percent_Identity=25.3036437246964, Blast_Score=149, Evalue=5e-36,
Organism=Saccharomyces cerevisiae, GI6320826, Length=650, Percent_Identity=26.6153846153846, Blast_Score=169, Evalue=2e-42,
Organism=Drosophila melanogaster, GI28573410, Length=644, Percent_Identity=27.1739130434783, Blast_Score=170, Evalue=3e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48 [H]

EC number: =2.4.1.18 [H]

Molecular weight: Translated: 84965; Mature: 84834

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTKGLPKDTAVTPSPHLRPHTADLNRLLAGEHHDPHSILGAHEYDDHTVIRAYRPHAT
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHCCCCCCCCCEEEEEECCCHH
EVAAVVGGERHVFTHLEAGVFAVTLPFTGLIDYRLEVGYDHGGDQPHIHHTADAYRFLPT
HHHHHHCCCCEEEEEECCCEEEEEECCCCEEEEEEEECCCCCCCCCCEECCHHHHHHHCC
LGEMDLHLFSEGRHERLWEVLGAHPRTFETPDGVVEGVSFAVWAPNANGVQLIGDFNHWD
CCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCHHHCCCEEEEECCCCCCEEEEECCCCCC
GNEAQLRVLGSTGVWELFWPDFPVDGLYKFRIHGADGVVSERADPMAFATEVPPQTASRV
CCCEEEEEECCCCEEEEECCCCCCCCEEEEEEECCCCCHHCCCCCCEEEECCCCCHHHHE
TTSSYTWNDDAWMTQRAAQNPVFEPMSTLEVHLMSWRPGLSYVELADQLTEYIVEHGFTH
EECCEEECCCHHHHHHHHCCCCCCCCHHEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCE
VEMLPVAEHPFGGSWGYQVTSYYAPTSRLGTPDEFRYLVDRLHQAGIGVIVDWVPAHFPK
EEEEECCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCC
DAWALGRFDGTALYEHADPRRGEQLDWGTYVFDFGRAEVRNFLVANALYWLQEFHVDGLR
CHHEECCCCCCEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCEE
VDAVASMLYLDYSRPEGGWTPNIYGGRENLEAVQFLQEMNATVHKASPGIVTIAEESTSW
HHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCEEEEECCCCCC
PGVTRPTNLGGLGFSMKWNMGWMNDTLAFISRDPIHRSYHHHEMTFSMLYAFSENYVLPI
CCCCCCCCCCCCCEEEEECCCCCCHHHHHHCCCCCHHCHHHHHHHHHHHHHHCCCEEEEC
SHDEVVHGKGTLWGRMLGDDHRKAAGVRQLLAYQWAHPGKQLLFQGQEFGQRAEWSEERG
CCCCEEECCCCEEEHHCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCHHHCCCCCCCHHHC
VDWYQLDENSYSGGILRMISDMNGIYTSHRALWSHDTSPEGYSWIDANDSTNNVLSFLRY
CCEEEECCCCCCCHHHHHHHHCCCHHHHCHHHCCCCCCCCCCEEEECCCCHHHHHHHHHC
GDDGSVLACVFNFSGSEHSQYRLGLPHAGTWREVLNTDAADYNGAGIGNYGAVQATDEPW
CCCCCEEEEEEECCCCCCCEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCC
HGRPASAVMVLPPLSALWFEPVAAEAPVVQEPPTAPPLS
CCCCCCEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKTKGLPKDTAVTPSPHLRPHTADLNRLLAGEHHDPHSILGAHEYDDHTVIRAYRPHAT
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHCCCCCCCCCEEEEEECCCHH
EVAAVVGGERHVFTHLEAGVFAVTLPFTGLIDYRLEVGYDHGGDQPHIHHTADAYRFLPT
HHHHHHCCCCEEEEEECCCEEEEEECCCCEEEEEEEECCCCCCCCCCEECCHHHHHHHCC
LGEMDLHLFSEGRHERLWEVLGAHPRTFETPDGVVEGVSFAVWAPNANGVQLIGDFNHWD
CCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCHHHCCCEEEEECCCCCCEEEEECCCCCC
GNEAQLRVLGSTGVWELFWPDFPVDGLYKFRIHGADGVVSERADPMAFATEVPPQTASRV
CCCEEEEEECCCCEEEEECCCCCCCCEEEEEEECCCCCHHCCCCCCEEEECCCCCHHHHE
TTSSYTWNDDAWMTQRAAQNPVFEPMSTLEVHLMSWRPGLSYVELADQLTEYIVEHGFTH
EECCEEECCCHHHHHHHHCCCCCCCCHHEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCE
VEMLPVAEHPFGGSWGYQVTSYYAPTSRLGTPDEFRYLVDRLHQAGIGVIVDWVPAHFPK
EEEEECCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCC
DAWALGRFDGTALYEHADPRRGEQLDWGTYVFDFGRAEVRNFLVANALYWLQEFHVDGLR
CHHEECCCCCCEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCEE
VDAVASMLYLDYSRPEGGWTPNIYGGRENLEAVQFLQEMNATVHKASPGIVTIAEESTSW
HHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCEEEEECCCCCC
PGVTRPTNLGGLGFSMKWNMGWMNDTLAFISRDPIHRSYHHHEMTFSMLYAFSENYVLPI
CCCCCCCCCCCCCEEEEECCCCCCHHHHHHCCCCCHHCHHHHHHHHHHHHHHCCCEEEEC
SHDEVVHGKGTLWGRMLGDDHRKAAGVRQLLAYQWAHPGKQLLFQGQEFGQRAEWSEERG
CCCCEEECCCCEEEHHCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCHHHCCCCCCCHHHC
VDWYQLDENSYSGGILRMISDMNGIYTSHRALWSHDTSPEGYSWIDANDSTNNVLSFLRY
CCEEEECCCCCCCHHHHHHHHCCCHHHHCHHHCCCCCCCCCCEEEECCCCHHHHHHHHHC
GDDGSVLACVFNFSGSEHSQYRLGLPHAGTWREVLNTDAADYNGAGIGNYGAVQATDEPW
CCCCCEEEEEEECCCCCCCEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCC
HGRPASAVMVLPPLSALWFEPVAAEAPVVQEPPTAPPLS
CCCCCCEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA