| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119869859
Identifier: 119869859
GI number: 119869859
Start: 4041793
End: 4042512
Strand: Direct
Name: 119869859
Synonym: Mkms_3828
Alternate gene names: NA
Gene position: 4041793-4042512 (Clockwise)
Preceding gene: 119869856
Following gene: 119869860
Centisome position: 70.45
GC content: 66.53
Gene sequence:
>720_bases ATGCCCAGACATTCTCCGGTACAGTTCATCCATGTTCTCCCGACCCGGCCAGGCTATGAGCTGCCGGTGAGCACCCCCAG CGAAGAGCCGGCCTGGAAGCAGCGGGCCGTCGAACGGTCGATCAAGACCGCCAAACTGCGCGCCGCGCAGCGCGTCCAGC GCTTCCTCGACGCCGCCCAGGCGATCATCATCGAAAAGGGCAGCACCGACTTCACGGTGCAGGAGGTCGTCGACCGCTCG CGCCAGTCGCTTCGCAGCTTCTACCTGCAGTTCGACGGTAAACACGAGTTGCTGCTGGCCCTCTTCGAGGATGCGCTGAG CCGGTCGGCCGACCAGATCCGGGCGGCCACGGCCAGCCACACCGATCCGATCGAACGCCTCAAAGTCGCCGTCCAGCTGC TTTTCGAGACCTCCCGGCCGGACCCCGCCGCGCAGCGGCCCCTGTTCACCGACTTCGCGCCCCGACTCCTTGTGTCACAT CCCGCGGAGGTCAAGGTGGCGCACGCCCCGTTGCTCGTGCTGCTCGCCGAGTTGATGGAAGAGGCCAGCGCCGCAGGCCA ACTACGCGAGGGCATCAACCCCAAGCGGATGGCCGCGATGACGATGCAGACGGTCATGTTCGTCGCACAGTCCAGCGGCG GCGCCGACGACGGCTCCGTCCACCCGATCACCGCCGACGAATGCTGGGACTTCGTCGCGCACGGTTTCGCCAAGATCTAG
Upstream 100 bases:
>100_bases TGGGGAAACGCTTCAATAATGCCCAATCTGAGAATACTATTCTCGCCATGAGGAAGGCACAATCTCCGACACGTGGGCCG CGAGGGGGGCTTCGACCGCA
Downstream 100 bases:
>100_bases CACACCTCCACCGCCCGCCGGGCGGCCTCGCCGATGCGCGGCGTGGCCTCACCCGCGGGACCATCCGTGCGCCCTCGACA TTCTCGCGGAAACGTCATTC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; Transcriptional Regulatory Protein
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MPRHSPVQFIHVLPTRPGYELPVSTPSEEPAWKQRAVERSIKTAKLRAAQRVQRFLDAAQAIIIEKGSTDFTVQEVVDRS RQSLRSFYLQFDGKHELLLALFEDALSRSADQIRAATASHTDPIERLKVAVQLLFETSRPDPAAQRPLFTDFAPRLLVSH PAEVKVAHAPLLVLLAELMEEASAAGQLREGINPKRMAAMTMQTVMFVAQSSGGADDGSVHPITADECWDFVAHGFAKI
Sequences:
>Translated_239_residues MPRHSPVQFIHVLPTRPGYELPVSTPSEEPAWKQRAVERSIKTAKLRAAQRVQRFLDAAQAIIIEKGSTDFTVQEVVDRS RQSLRSFYLQFDGKHELLLALFEDALSRSADQIRAATASHTDPIERLKVAVQLLFETSRPDPAAQRPLFTDFAPRLLVSH PAEVKVAHAPLLVLLAELMEEASAAGQLREGINPKRMAAMTMQTVMFVAQSSGGADDGSVHPITADECWDFVAHGFAKI >Mature_238_residues PRHSPVQFIHVLPTRPGYELPVSTPSEEPAWKQRAVERSIKTAKLRAAQRVQRFLDAAQAIIIEKGSTDFTVQEVVDRSR QSLRSFYLQFDGKHELLLALFEDALSRSADQIRAATASHTDPIERLKVAVQLLFETSRPDPAAQRPLFTDFAPRLLVSHP AEVKVAHAPLLVLLAELMEEASAAGQLREGINPKRMAAMTMQTVMFVAQSSGGADDGSVHPITADECWDFVAHGFAKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26460; Mature: 26328
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRHSPVQFIHVLPTRPGYELPVSTPSEEPAWKQRAVERSIKTAKLRAAQRVQRFLDAAQ CCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIIIEKGSTDFTVQEVVDRSRQSLRSFYLQFDGKHELLLALFEDALSRSADQIRAATASH HHEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC TDPIERLKVAVQLLFETSRPDPAAQRPLFTDFAPRLLVSHPAEVKVAHAPLLVLLAELME CCHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHH EASAAGQLREGINPKRMAAMTMQTVMFVAQSSGGADDGSVHPITADECWDFVAHGFAKI HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure PRHSPVQFIHVLPTRPGYELPVSTPSEEPAWKQRAVERSIKTAKLRAAQRVQRFLDAAQ CCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIIIEKGSTDFTVQEVVDRSRQSLRSFYLQFDGKHELLLALFEDALSRSADQIRAATASH HHEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC TDPIERLKVAVQLLFETSRPDPAAQRPLFTDFAPRLLVSHPAEVKVAHAPLLVLLAELME CCHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHH EASAAGQLREGINPKRMAAMTMQTVMFVAQSSGGADDGSVHPITADECWDFVAHGFAKI HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA