| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119869796
Identifier: 119869796
GI number: 119869796
Start: 3982580
End: 3984232
Strand: Direct
Name: 119869796
Synonym: Mkms_3765
Alternate gene names: NA
Gene position: 3982580-3984232 (Clockwise)
Preceding gene: 119869795
Following gene: 119869797
Centisome position: 69.42
GC content: 69.93
Gene sequence:
>1653_bases ATGGCCGACATCCCGGGCCGGCCGCTGCCGCAGGTGACCGCGCAGAACGAGTTCTTCTGGACCGCGGGCGCCGACGGTGA ACTGCGCATCCAGCAGTGCCAGGACTGCGAGTCGCTGATCCACCCGCCCCAACCGATCTGCCGGTACTGCCGCAGCCAGA AACTGGGCGTCCGCACGGTGTCGGGGCGGGGCACACTGGCGGGTTTCACCGTCAACCACCGGTTCGGTTTCCCCGACCTG CCGCCGCCGTACGTGGTGGCGCAGGTGGCGATCGACGAGGACCCGCGGGTCCGGTTGACCACCAACATCGTCGAATCCGA CCCCGACGGCCTCGAGCTGGGCCAACCCGTCGAGGTGGTGTTCCAGCAGGCCGACGACGTCTGGCTGCCGCTGTTCCGGC CGGTCGCCGGCGACCCGGGCGAGTTGCCTGCCGACGAGATCGCCCCCGAACGTTTCGGCGACCACATCCGGCCGATGCTG CGCACCGAGAAGTTCGAGCAGCACTCGGCGATCACCGGTATCGGGGCCTCGCGGCTCGGTCGCCGGCTGATGGTGCCGCC GCTGTCTTTGACCATCGAGGCGTGTGAGGCCGCGGTCGCCGATGCGGGGCTGACCCTGGACGACATCGACGGGCTGTCGA CCTATCCGGGACTCGACGTCGCGGGCATGGGCGAAGGCGGGGTCACCGCACTCGAGGGAGCGCTCGGGCTGCGGCCCACG TGGATCAACGGGGGTATGGACACCTTCGGTCCGGGCGGCTCGGTGATCGCCGCGATGATGGCCGTGGCCACCGGGATGGC GCGGCACGTGCTGTGCTTCCGCACGCTGTGGGAGGCCACGTTCGGGCAGCTGCTCAAGGAGGGCAAGATGGCGCCGCCCG GGGGCGGGCGGACCACCAGCTGGCAGATGCCGTTCGGTGCGACATCGGCGGCCCACACCCTGGCGCTCAACGCCCAACGG CATTTCCACCGGTACGGCACCACCCGCGAGACGCTGGGCTGGATCGCGCTCAACCAGCGGGCCAACGCCGCGCTGAACCC GACGGCGATCTACCGCGATCCGATGTCGATGGAGGACTACCTGTCGGCCCGGCCCATCACCACACCGTTCGGCCTCTACG ACTGCGATGTGCCGTGCGACGGTGCGGTCGCGGTCGTGGTCTCGGCGGTCGACGCCGCCCGGGACATGCCGAAGAAGCCG GTGTTCATCGAGGCCGTCGGCACCCAGATCGTCGAACGCACCGACTGGGACCAGACGACACTGACCCACGAACCGCAGGT GCTCGGCCAGTCCGCACACCTGTGGACCCGAACCTCGTTGCGGCCCAGCGATGTCGACGTCGCCGAACTCTACGACGGCT TCACGTTCAACTGCCTGTCCTGGATCGAGGCCCTCGGATTCTGCGGGATCGGCGAGGCGAAGGACTTCCTCGACGGCGGC CACAACATCGCCCGCGACGGCGTCCTGCCGCTCAACACCCACGGCGGTCAGCTCTCCCACGGCCGCACCCACGGGATGGG CCTGATGCACGAAGCCGTCAGCCAGTTGCGGGGCGAGGCCGGGGATCGCCAGGTGGCCGACGCACGGGTGGCCGTGGTCA GCAGCGGCGGCCTGACGCCCAGTGGTGTGCTCCTGCTGAGGAGCGACGCGTGA
Upstream 100 bases:
>100_bases CATCCCAACCAACACCGGGTGCGGTATCGGCGGATGACGACGCGAACGGCGACCACGCGGACGCCGTCCGCGACGAGCGC ATGCTTCCGGGACTGTAGAC
Downstream 100 bases:
>100_bases CCGCGCACGTGAGGAGCGAAGACGGCACCGCGCACGCGAGGAGCGAAACAGCACCAGCACCGCGTCCGCGGGTGGTGATG GTCGACGGCGTGCCGATGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 550; Mature: 549
Protein sequence:
>550_residues MADIPGRPLPQVTAQNEFFWTAGADGELRIQQCQDCESLIHPPQPICRYCRSQKLGVRTVSGRGTLAGFTVNHRFGFPDL PPPYVVAQVAIDEDPRVRLTTNIVESDPDGLELGQPVEVVFQQADDVWLPLFRPVAGDPGELPADEIAPERFGDHIRPML RTEKFEQHSAITGIGASRLGRRLMVPPLSLTIEACEAAVADAGLTLDDIDGLSTYPGLDVAGMGEGGVTALEGALGLRPT WINGGMDTFGPGGSVIAAMMAVATGMARHVLCFRTLWEATFGQLLKEGKMAPPGGGRTTSWQMPFGATSAAHTLALNAQR HFHRYGTTRETLGWIALNQRANAALNPTAIYRDPMSMEDYLSARPITTPFGLYDCDVPCDGAVAVVVSAVDAARDMPKKP VFIEAVGTQIVERTDWDQTTLTHEPQVLGQSAHLWTRTSLRPSDVDVAELYDGFTFNCLSWIEALGFCGIGEAKDFLDGG HNIARDGVLPLNTHGGQLSHGRTHGMGLMHEAVSQLRGEAGDRQVADARVAVVSSGGLTPSGVLLLRSDA
Sequences:
>Translated_550_residues MADIPGRPLPQVTAQNEFFWTAGADGELRIQQCQDCESLIHPPQPICRYCRSQKLGVRTVSGRGTLAGFTVNHRFGFPDL PPPYVVAQVAIDEDPRVRLTTNIVESDPDGLELGQPVEVVFQQADDVWLPLFRPVAGDPGELPADEIAPERFGDHIRPML RTEKFEQHSAITGIGASRLGRRLMVPPLSLTIEACEAAVADAGLTLDDIDGLSTYPGLDVAGMGEGGVTALEGALGLRPT WINGGMDTFGPGGSVIAAMMAVATGMARHVLCFRTLWEATFGQLLKEGKMAPPGGGRTTSWQMPFGATSAAHTLALNAQR HFHRYGTTRETLGWIALNQRANAALNPTAIYRDPMSMEDYLSARPITTPFGLYDCDVPCDGAVAVVVSAVDAARDMPKKP VFIEAVGTQIVERTDWDQTTLTHEPQVLGQSAHLWTRTSLRPSDVDVAELYDGFTFNCLSWIEALGFCGIGEAKDFLDGG HNIARDGVLPLNTHGGQLSHGRTHGMGLMHEAVSQLRGEAGDRQVADARVAVVSSGGLTPSGVLLLRSDA >Mature_549_residues ADIPGRPLPQVTAQNEFFWTAGADGELRIQQCQDCESLIHPPQPICRYCRSQKLGVRTVSGRGTLAGFTVNHRFGFPDLP PPYVVAQVAIDEDPRVRLTTNIVESDPDGLELGQPVEVVFQQADDVWLPLFRPVAGDPGELPADEIAPERFGDHIRPMLR TEKFEQHSAITGIGASRLGRRLMVPPLSLTIEACEAAVADAGLTLDDIDGLSTYPGLDVAGMGEGGVTALEGALGLRPTW INGGMDTFGPGGSVIAAMMAVATGMARHVLCFRTLWEATFGQLLKEGKMAPPGGGRTTSWQMPFGATSAAHTLALNAQRH FHRYGTTRETLGWIALNQRANAALNPTAIYRDPMSMEDYLSARPITTPFGLYDCDVPCDGAVAVVVSAVDAARDMPKKPV FIEAVGTQIVERTDWDQTTLTHEPQVLGQSAHLWTRTSLRPSDVDVAELYDGFTFNCLSWIEALGFCGIGEAKDFLDGGH NIARDGVLPLNTHGGQLSHGRTHGMGLMHEAVSQLRGEAGDRQVADARVAVVSSGGLTPSGVLLLRSDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI302344762, Length=255, Percent_Identity=25.8823529411765, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI19923233, Length=246, Percent_Identity=26.4227642276423, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI302344760, Length=246, Percent_Identity=26.4227642276423, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI302344767, Length=249, Percent_Identity=26.5060240963855, Blast_Score=81, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17537653, Length=234, Percent_Identity=30.3418803418803, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI19921506, Length=246, Percent_Identity=29.2682926829268, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI24585051, Length=246, Percent_Identity=29.2682926829268, Blast_Score=91, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020617 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: NA
Molecular weight: Translated: 59062; Mature: 58930
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADIPGRPLPQVTAQNEFFWTAGADGELRIQQCQDCESLIHPPQPICRYCRSQKLGVRTV CCCCCCCCCCCCCCCCCEEEECCCCCCEEHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEE SGRGTLAGFTVNHRFGFPDLPPPYVVAQVAIDEDPRVRLTTNIVESDPDGLELGQPVEVV CCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCHHHHH FQQADDVWLPLFRPVAGDPGELPADEIAPERFGDHIRPMLRTEKFEQHSAITGIGASRLG HHHCCCCEEHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC RRLMVPPLSLTIEACEAAVADAGLTLDDIDGLSTYPGLDVAGMGEGGVTALEGALGLRPT CEEECCCHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCEECCCCCCCHHHHHCCCCCCE WINGGMDTFGPGGSVIAAMMAVATGMARHVLCFRTLWEATFGQLLKEGKMAPPGGGRTTS EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE WQMPFGATSAAHTLALNAQRHFHRYGTTRETLGWIALNQRANAALNPTAIYRDPMSMEDY EECCCCCCCHHHEEEECHHHHHHHCCCCHHHHEEEEECCCCCCCCCCCEEEECCCCHHHH LSARPITTPFGLYDCDVPCDGAVAVVVSAVDAARDMPKKPVFIEAVGTQIVERTDWDQTT HCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCCCCCCC LTHEPQVLGQSAHLWTRTSLRPSDVDVAELYDGFTFNCLSWIEALGFCGIGEAKDFLDGG CCCCHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHCCC HNIARDGVLPLNTHGGQLSHGRTHGMGLMHEAVSQLRGEAGDRQVADARVAVVSSGGLTP CCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCC SGVLLLRSDA CCEEEEECCC >Mature Secondary Structure ADIPGRPLPQVTAQNEFFWTAGADGELRIQQCQDCESLIHPPQPICRYCRSQKLGVRTV CCCCCCCCCCCCCCCCEEEECCCCCCEEHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEE SGRGTLAGFTVNHRFGFPDLPPPYVVAQVAIDEDPRVRLTTNIVESDPDGLELGQPVEVV CCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCHHHHH FQQADDVWLPLFRPVAGDPGELPADEIAPERFGDHIRPMLRTEKFEQHSAITGIGASRLG HHHCCCCEEHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC RRLMVPPLSLTIEACEAAVADAGLTLDDIDGLSTYPGLDVAGMGEGGVTALEGALGLRPT CEEECCCHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCEECCCCCCCHHHHHCCCCCCE WINGGMDTFGPGGSVIAAMMAVATGMARHVLCFRTLWEATFGQLLKEGKMAPPGGGRTTS EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE WQMPFGATSAAHTLALNAQRHFHRYGTTRETLGWIALNQRANAALNPTAIYRDPMSMEDY EECCCCCCCHHHEEEECHHHHHHHCCCCHHHHEEEEECCCCCCCCCCCEEEECCCCHHHH LSARPITTPFGLYDCDVPCDGAVAVVVSAVDAARDMPKKPVFIEAVGTQIVERTDWDQTT HCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCCCCCCC LTHEPQVLGQSAHLWTRTSLRPSDVDVAELYDGFTFNCLSWIEALGFCGIGEAKDFLDGG CCCCHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHCCC HNIARDGVLPLNTHGGQLSHGRTHGMGLMHEAVSQLRGEAGDRQVADARVAVVSSGGLTP CCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCC SGVLLLRSDA CCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]