| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119869737
Identifier: 119869737
GI number: 119869737
Start: 3912771
End: 3913394
Strand: Direct
Name: 119869737
Synonym: Mkms_3705
Alternate gene names: NA
Gene position: 3912771-3913394 (Clockwise)
Preceding gene: 119869728
Following gene: 119869741
Centisome position: 68.2
GC content: 69.23
Gene sequence:
>624_bases ATGGCGTCGACGTCAGTCGCGAGCACCCGCCGCAGCCGGGCGAAGTCGGATCGTCGCAGCCAGCTGATCGCCGCGGCGGA ACGCCTTGTCGCCGAGAAGGGTTACCTCGCGGTGCGCCTCGAGGACATCGGCTCGGCGGTCGGCGTCAGCGGACCCGCGA TCTACCGGCACTTCCCCAACAAAGAGGCGATGCTCGTCGAACTGCTGGTGGGTATCAGCACCCGGCTGCTGGCCGGTGCG CGCGAAGTGCTGACCGACTCCCCGGACGCGGAGACGGCCCTCGACGGGCTGATCGACTTCCATCTCGACTTCGCGCTCGG CGAGTCCGACCTCATCCGGATTCAGGACCGGGACCTCGGCCATCTGCCGGACCCCGCCAAACGACAGGTGCGCAGAGCGC AGCGCCAGTACGTGGAGATCTGGGTGGAGGTGCTGCGGGCCGTCGACCCCTCGCTCGACGAGGCCCAGGCCCGGCTGATG GCCCACGCGGCGTTCGGGCTCCTCAACTCCACACCGCACAGCGTCAAACCCGGGGCAAGCAAAACGGCCGAGGCCAGCTC GCGCACTGCCCTTCGAGCGATGACAGTGGCGGCGCTGGCCTCGGCCGGTCGGCTACAGGGTTAA
Upstream 100 bases:
>100_bases CCATCCGTGAACCCGTTCATTTGAGTTAATGACGACTAACTCGTGGTATGTTAATCACGATTAACACCCGATGTCCACCT CCCACCGCAAGAGGCCGTCC
Downstream 100 bases:
>100_bases TACCAGACTTTTCGGCCTCCGACGGCGCGGCCGGTCGCTCCGAGGATCCAGAAGACCGCACCGATCACGATGAGAACCGC ACCGATGGTCGTCAAGATGT
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Regulatory Protein TetR; Transcriptional Regulator; TetR-Family Transcriptional Regulator; Regulatory Protein; Transcriptional Regulator TetR Family Protein; Tetr Family Transcriptional Regulator; HTH-Type Transcriptional Repressor; LOW QUALITY PROTEIN TetR Family Transcriptional Regulator; TetR-Family Protein Transcriptional Regulator; TetR-Family Transcriptional Repressor Mce3R; LOW QUALITY PROTEIN TetR-Family Transcriptional Regulator
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MASTSVASTRRSRAKSDRRSQLIAAAERLVAEKGYLAVRLEDIGSAVGVSGPAIYRHFPNKEAMLVELLVGISTRLLAGA REVLTDSPDAETALDGLIDFHLDFALGESDLIRIQDRDLGHLPDPAKRQVRRAQRQYVEIWVEVLRAVDPSLDEAQARLM AHAAFGLLNSTPHSVKPGASKTAEASSRTALRAMTVAALASAGRLQG
Sequences:
>Translated_207_residues MASTSVASTRRSRAKSDRRSQLIAAAERLVAEKGYLAVRLEDIGSAVGVSGPAIYRHFPNKEAMLVELLVGISTRLLAGA REVLTDSPDAETALDGLIDFHLDFALGESDLIRIQDRDLGHLPDPAKRQVRRAQRQYVEIWVEVLRAVDPSLDEAQARLM AHAAFGLLNSTPHSVKPGASKTAEASSRTALRAMTVAALASAGRLQG >Mature_206_residues ASTSVASTRRSRAKSDRRSQLIAAAERLVAEKGYLAVRLEDIGSAVGVSGPAIYRHFPNKEAMLVELLVGISTRLLAGAR EVLTDSPDAETALDGLIDFHLDFALGESDLIRIQDRDLGHLPDPAKRQVRRAQRQYVEIWVEVLRAVDPSLDEAQARLMA HAAFGLLNSTPHSVKPGASKTAEASSRTALRAMTVAALASAGRLQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22276; Mature: 22144
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTSVASTRRSRAKSDRRSQLIAAAERLVAEKGYLAVRLEDIGSAVGVSGPAIYRHFPN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCHHCCCCCHHHHHCCC KEAMLVELLVGISTRLLAGAREVLTDSPDAETALDGLIDFHLDFALGESDLIRIQDRDLG CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCC HLPDPAKRQVRRAQRQYVEIWVEVLRAVDPSLDEAQARLMAHAAFGLLNSTPHSVKPGAS CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC KTAEASSRTALRAMTVAALASAGRLQG CHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ASTSVASTRRSRAKSDRRSQLIAAAERLVAEKGYLAVRLEDIGSAVGVSGPAIYRHFPN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCHHCCCCCHHHHHCCC KEAMLVELLVGISTRLLAGAREVLTDSPDAETALDGLIDFHLDFALGESDLIRIQDRDLG CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCC HLPDPAKRQVRRAQRQYVEIWVEVLRAVDPSLDEAQARLMAHAAFGLLNSTPHSVKPGAS CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC KTAEASSRTALRAMTVAALASAGRLQG CHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA