| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is fur [H]
Identifier: 119869542
GI number: 119869542
Start: 3687417
End: 3687812
Strand: Direct
Name: fur [H]
Synonym: Mkms_3510
Alternate gene names: 119869542
Gene position: 3687417-3687812 (Clockwise)
Preceding gene: 119869541
Following gene: 119869546
Centisome position: 64.27
GC content: 71.46
Gene sequence:
>396_bases GTGAGCCCGGCCCCGGTCCGCGCGACGCGGCAGCGGGCGGCGATCGCCGACCTGCTCGACGGACTCGACGAGTTCCGCTC GGCCCAGGAGCTGCACGACGCGCTCAAGCGCCGCGGTGAGGGCATCGGGTTGACGACGGTATACCGCACCCTGCAGTCGA TGGCGGAGTCCGGGCTGGTCGACGTGCTCCGCACCGACACCGGCGAGTCGGTCTACCGCCGCTGCTCGGCCGACCACCAC CATCACCTGGTGTGCCGCGCGTGCGGCGCGGCCGTCGAGATCCAGGGCGGTCAGGTCGAGACGTGGGCCGCCGACATCGC CCGCGAGCACGGATTCTCCGACGTCAGCCACACCATCGAGATCTTCGGTCTGTGCGGGGACTGCTCAGCCCGTTAG
Upstream 100 bases:
>100_bases CCAGCGAGCGGTCCGGCCGCGAGGTGCTCTACCGGCTCGTCGACGCGCATCTGGTGCACATCGTCACCGACGCCGTCGCC CACGCCGGTGAGGACGTCCG
Downstream 100 bases:
>100_bases CGCCCGGCGGATGTCGGCGCCGGCGCTGAGCACCAGCAGGATCAGCGTGCGCAACGCGTCGTCGGTGAGGCCGGCGGCCG GAAAGTTGTAGCGCAGCAAC
Product: zinc uptake regulator
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MSPAPVRATRQRAAIADLLDGLDEFRSAQELHDALKRRGEGIGLTTVYRTLQSMAESGLVDVLRTDTGESVYRRCSADHH HHLVCRACGAAVEIQGGQVETWAADIAREHGFSDVSHTIEIFGLCGDCSAR
Sequences:
>Translated_131_residues MSPAPVRATRQRAAIADLLDGLDEFRSAQELHDALKRRGEGIGLTTVYRTLQSMAESGLVDVLRTDTGESVYRRCSADHH HHLVCRACGAAVEIQGGQVETWAADIAREHGFSDVSHTIEIFGLCGDCSAR >Mature_130_residues SPAPVRATRQRAAIADLLDGLDEFRSAQELHDALKRRGEGIGLTTVYRTLQSMAESGLVDVLRTDTGESVYRRCSADHHH HLVCRACGAAVEIQGGQVETWAADIAREHGFSDVSHTIEIFGLCGDCSAR
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes. Regulates the expression of the fbp protein [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=131, Percent_Identity=33.587786259542, Blast_Score=79, Evalue=1e-16,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 14247; Mature: 14116
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPAPVRATRQRAAIADLLDGLDEFRSAQELHDALKRRGEGIGLTTVYRTLQSMAESGLV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHH DVLRTDTGESVYRRCSADHHHHLVCRACGAAVEIQGGQVETWAADIAREHGFSDVSHTIE HHHHCCCCHHHHHHHCCCCHHHHHHHHHCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHH IFGLCGDCSAR HHHCCCCCCCC >Mature Secondary Structure SPAPVRATRQRAAIADLLDGLDEFRSAQELHDALKRRGEGIGLTTVYRTLQSMAESGLV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHH DVLRTDTGESVYRRCSADHHHHLVCRACGAAVEIQGGQVETWAADIAREHGFSDVSHTIE HHHHCCCCHHHHHHHCCCCHHHHHHHHHCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHH IFGLCGDCSAR HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8406856 [H]