| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
Click here to switch to the map view.
The map label for this gene is 119869478
Identifier: 119869478
GI number: 119869478
Start: 3615199
End: 3615855
Strand: Direct
Name: 119869478
Synonym: Mkms_3446
Alternate gene names: NA
Gene position: 3615199-3615855 (Clockwise)
Preceding gene: 119869476
Following gene: 119869479
Centisome position: 63.01
GC content: 71.54
Gene sequence:
>657_bases ATGGATGCCCAGATCGTGCTGTTCGACGGATTCGACCCACTCGACGTCATCGCGCCCTTCGAGGTCCTCGTCGCCGGCAG CGACGCCGTCGGGGGTGACCTGACCGTGGAACTCGTCTCCGCGGAGGGACCGCGGCCGGTGGTCAGCGGCAGCCGGGGCC TGGTCCTGCACGCGACGTCCGGATTGGACCCGCACCGGCCGGGTTTCGTGATCGTGCCGGGCGCCGCTGGGCCGATCGAG GGTGACCCCGACGAGGGGGTCGAGACCATCCCGGTCCTGTTGGCGCGCTTCGGCGATACGGTGGCGATCCCGCTGATGCG CCGGGCCATGGCCGATCCGGAGGTCACGGTGGCCACAGTCTGTGGCGGCTCCCTCGCCCTGGCCATGGCCGGTTTGCTCG AAGGCAGGTTCGCCGTCACCCACCACCTCGGCATGGACATGCTCGAGGCGACCGGCGCGCACGCCGTACCCGCCCGGGTG GTCGACGACGGCGACCTGGTCACCGCCGCGGGGGTCACCTCCGGGCTGGAGTTGGCGCTGCACCTGCTCGACCGCAGCTA CGGCCCGCAGATCGCGGCCGCGGTCGAATCGCTGTTCGCCTATGAACGGCGCGGCACGGTGTGGAGCAACCGCGGCCGCA TCCCGGTGTCGGTGTGA
Upstream 100 bases:
>100_bases GTGCATGGCGGCACCATAACAGTCACGCTGGCAAGATATCGGCGTGGTTTGGCGATCTGGCCACTCCCGGAGCGCAGCCG GCGCGGGCACGCTGGTCGGC
Downstream 100 bases:
>100_bases CGGGGGTCGTCGGCCAATGGGACGTGCGGATCAGGACCCCGATCGGATCCCTTTCCACCACTTACGAATTCGTCGTTGAC GGAGGAGCCCTGCGTGGCAG
Product: ThiJ/PfpI domain-containing protein
Products: NA
Alternate protein names: ThiJ/PfpI Domain-Containing Protein; Transcriptional Regulator AraC Family Protein; ThiJ/PfpI; ThiJ/PfpI Family Protein; AraC Family Transcriptional Regulator; PfpI-ThiJ-DJ-1 Superfamily Protein; Transcriptional Regulator AraC Family; LOW QUALITY PROTEIN ThiJ/PfpI Domain-Containing Protein
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MDAQIVLFDGFDPLDVIAPFEVLVAGSDAVGGDLTVELVSAEGPRPVVSGSRGLVLHATSGLDPHRPGFVIVPGAAGPIE GDPDEGVETIPVLLARFGDTVAIPLMRRAMADPEVTVATVCGGSLALAMAGLLEGRFAVTHHLGMDMLEATGAHAVPARV VDDGDLVTAAGVTSGLELALHLLDRSYGPQIAAAVESLFAYERRGTVWSNRGRIPVSV
Sequences:
>Translated_218_residues MDAQIVLFDGFDPLDVIAPFEVLVAGSDAVGGDLTVELVSAEGPRPVVSGSRGLVLHATSGLDPHRPGFVIVPGAAGPIE GDPDEGVETIPVLLARFGDTVAIPLMRRAMADPEVTVATVCGGSLALAMAGLLEGRFAVTHHLGMDMLEATGAHAVPARV VDDGDLVTAAGVTSGLELALHLLDRSYGPQIAAAVESLFAYERRGTVWSNRGRIPVSV >Mature_218_residues MDAQIVLFDGFDPLDVIAPFEVLVAGSDAVGGDLTVELVSAEGPRPVVSGSRGLVLHATSGLDPHRPGFVIVPGAAGPIE GDPDEGVETIPVLLARFGDTVAIPLMRRAMADPEVTVATVCGGSLALAMAGLLEGRFAVTHHLGMDMLEATGAHAVPARV VDDGDLVTAAGVTSGLELALHLLDRSYGPQIAAAVESLFAYERRGTVWSNRGRIPVSV
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22463; Mature: 22463
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAQIVLFDGFDPLDVIAPFEVLVAGSDAVGGDLTVELVSAEGPRPVVSGSRGLVLHATS CCCEEEEECCCCCHHHHCCEEEEEECCCCCCCCEEEEEEECCCCCCEECCCCCEEEEEEC GLDPHRPGFVIVPGAAGPIEGDPDEGVETIPVLLARFGDTVAIPLMRRAMADPEVTVATV CCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHCCCCEEEEEE CGGSLALAMAGLLEGRFAVTHHLGMDMLEATGAHAVPARVVDDGDLVTAAGVTSGLELAL CCCHHHHHHHHHHCCCEEEHHHHCHHHHHHCCCCCCCEEEECCCCEEEECCCHHHHHHHH HLLDRSYGPQIAAAVESLFAYERRGTVWSNRGRIPVSV HHHHCCCCCHHHHHHHHHHHHHHCCCEECCCCEEEECC >Mature Secondary Structure MDAQIVLFDGFDPLDVIAPFEVLVAGSDAVGGDLTVELVSAEGPRPVVSGSRGLVLHATS CCCEEEEECCCCCHHHHCCEEEEEECCCCCCCCEEEEEEECCCCCCEECCCCCEEEEEEC GLDPHRPGFVIVPGAAGPIEGDPDEGVETIPVLLARFGDTVAIPLMRRAMADPEVTVATV CCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHCCCCEEEEEE CGGSLALAMAGLLEGRFAVTHHLGMDMLEATGAHAVPARVVDDGDLVTAAGVTSGLELAL CCCHHHHHHHHHHCCCEEEHHHHCHHHHHHCCCCCCCEEEECCCCEEEECCCHHHHHHHH HLLDRSYGPQIAAAVESLFAYERRGTVWSNRGRIPVSV HHHHCCCCCHHHHHHHHHHHHHHCCCEECCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA