| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is dtd [H]
Identifier: 119869415
GI number: 119869415
Start: 3547690
End: 3548154
Strand: Direct
Name: dtd [H]
Synonym: Mkms_3383
Alternate gene names: 119869415
Gene position: 3547690-3548154 (Clockwise)
Preceding gene: 119869414
Following gene: 119869416
Centisome position: 61.84
GC content: 68.39
Gene sequence:
>465_bases ATGCCACCCGGCCTTTTCGCTTGGATGGAGCCCATGCGCGTTCTGGTCCAGCGGGTGTCCTCGGCAAGGGTCGTCGTCGA CGGCGAGGTGGTGGGCGCCATCGCACCCGCCCACCAGGGCCTCCTCGCGCTGGTCGGGGTCACCCACACCGACGACGCCG ACATCGCCCGCAAACTCGCCGAAAAGCTATGGCAGCTGCGCATTCTCGATGGGGAGCGCTCGGCTGCCGACGAGACGGCG CCCATCCTGGTGGTCAGCCAGTTCACCCTCTACGCCAACACCGTCAAGGGGCGGCGGCCGTCGTGGAACGCCGCGGCGCC GCGGCCGGTCGCCGAACCGTTGGTGGTGGCGTTCTGCGAGGCGCTGCGGGGGCTGGGAGCGCCGGTGCAAACAGGAGTTT TCGGGGCGCACATGAATGTGGAACTGGTGAACGACGGTCCGGTAACAGTGCTGCTGGAGCTCTGA
Upstream 100 bases:
>100_bases TCGGCTCGCCGACGCGACGTTTAGTCGGCTCGCCGACGCGACGTCTAGTCGGCTCGCCGACGCGACGTCTAGGTCGACAG CGAAAGGCCGGGTGGCGTGC
Downstream 100 bases:
>100_bases AAATCCGCTGTGTTCGCGCGTAAGGTCACCCCATGGCGACCAATTTCGACGCTCGGCTGGCGAATTACTCGTCACCGTTG CTGAGCATCTTCCGGATCAT
Product: D-tyrosyl-tRNA(Tyr) deacylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MPPGLFAWMEPMRVLVQRVSSARVVVDGEVVGAIAPAHQGLLALVGVTHTDDADIARKLAEKLWQLRILDGERSAADETA PILVVSQFTLYANTVKGRRPSWNAAAPRPVAEPLVVAFCEALRGLGAPVQTGVFGAHMNVELVNDGPVTVLLEL
Sequences:
>Translated_154_residues MPPGLFAWMEPMRVLVQRVSSARVVVDGEVVGAIAPAHQGLLALVGVTHTDDADIARKLAEKLWQLRILDGERSAADETA PILVVSQFTLYANTVKGRRPSWNAAAPRPVAEPLVVAFCEALRGLGAPVQTGVFGAHMNVELVNDGPVTVLLEL >Mature_153_residues PPGLFAWMEPMRVLVQRVSSARVVVDGEVVGAIAPAHQGLLALVGVTHTDDADIARKLAEKLWQLRILDGERSAADETAP ILVVSQFTLYANTVKGRRPSWNAAAPRPVAEPLVVAFCEALRGLGAPVQTGVFGAHMNVELVNDGPVTVLLEL
Specific function: Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine [H]
COG id: COG1490
COG function: function code J; D-Tyr-tRNAtyr deacylase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DTD family [H]
Homologues:
Organism=Homo sapiens, GI30795227, Length=150, Percent_Identity=37.3333333333333, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI1790320, Length=148, Percent_Identity=43.9189189189189, Blast_Score=100, Evalue=5e-23, Organism=Caenorhabditis elegans, GI115533292, Length=150, Percent_Identity=36, Blast_Score=84, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6319982, Length=150, Percent_Identity=38, Blast_Score=96, Evalue=2e-21, Organism=Drosophila melanogaster, GI281361569, Length=149, Percent_Identity=38.255033557047, Blast_Score=89, Evalue=9e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003732 [H]
Pfam domain/function: PF02580 Tyr_Deacylase [H]
EC number: NA
Molecular weight: Translated: 16438; Mature: 16307
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPGLFAWMEPMRVLVQRVSSARVVVDGEVVGAIAPAHQGLLALVGVTHTDDADIARKLA CCCCHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCHHCCEEEEEECCCCCCHHHHHHHH EKLWQLRILDGERSAADETAPILVVSQFTLYANTVKGRRPSWNAAAPRPVAEPLVVAFCE HHHHEEEEECCCCCCCCCCCCEEEEEHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHH ALRGLGAPVQTGVFGAHMNVELVNDGPVTVLLEL HHHHCCCCCCCCEEECEEEEEEECCCCEEEEEEC >Mature Secondary Structure PPGLFAWMEPMRVLVQRVSSARVVVDGEVVGAIAPAHQGLLALVGVTHTDDADIARKLA CCCHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCHHCCEEEEEECCCCCCHHHHHHHH EKLWQLRILDGERSAADETAPILVVSQFTLYANTVKGRRPSWNAAAPRPVAEPLVVAFCE HHHHEEEEECCCCCCCCCCCCEEEEEHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHH ALRGLGAPVQTGVFGAHMNVELVNDGPVTVLLEL HHHHCCCCCCCCEEECEEEEEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA