Definition Mycobacterium sp. KMS chromosome, complete genome.
Accession NC_008705
Length 5,737,227

Click here to switch to the map view.

The map label for this gene is 119869299

Identifier: 119869299

GI number: 119869299

Start: 3427714

End: 3428307

Strand: Direct

Name: 119869299

Synonym: Mkms_3267

Alternate gene names: NA

Gene position: 3427714-3428307 (Clockwise)

Preceding gene: 119869298

Following gene: 119869311

Centisome position: 59.75

GC content: 70.71

Gene sequence:

>594_bases
GTGGCCGGTTTGCGCCGCAAACTGCTCCTCGAGGCCGCCGCCGACCTGTTCGCGCGGCAAGGCTTTCACGCCGTGGGCAT
CGACGACATCGGTGCCGCAGCAGGGGTGAGCGGGCCGGCCGTCTACCGGCACTTTCAGAACAAGGACGCGATCCTGCGCG
AGTTATGCGACGCCGCCATGACTGAGCTGCTGGCCGGCGCCCGGCGCGCCACCAACGCCGGCACACCGACGGAGGTCCTG
CACGCCCTTGTCGACCTACACGCGGCCTTCGGCGCGCGACGACGCGGCCTGTTGGCCGTCTACGCCCGCGAGCACCGCTC
GCTGTCGCCGCTGGCGACCCGTGCCCTGCGACGCCGACAGCACAGGTACGAGTCCTTCTGGGTCGACGCGCTCGTACGAG
CACGGGGCGATCTGGACCGTGAGCGCGCACAGGGCCTGGTCGCCGCCGTGCTGTCATTGCTCAACGCGTCCGCGTACATG
CCGGCGTCGCTGGACGACGCGACGATTGAGGCGATGCTGGCCGCCGCGGCCGTTGCGGCGCTGTTCAGCCGCGCGGTTAC
ACAGCAGGTAGACGGCGCCCCGCACCGGATTTAG

Upstream 100 bases:

>100_bases
GGGTGCCGACGCAGGCAACCCCAGCGCCGGTAGGATCCCAGCCCGGCCCAGCGGATCGGACGGCGAACAACGTAACCACA
AATCGACAGGAGGCCTGAAA

Downstream 100 bases:

>100_bases
TGTGTGTCGAGCAGCGATTCGGGAACGTCCACCACTCGGGATCGCACGTACTCCCCGAGCCCCTTGGCCTGCGCGTCCGG
CCGGGTCGAGGAGGCCACCC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; TetR-Family Transcriptional Regulator

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MAGLRRKLLLEAAADLFARQGFHAVGIDDIGAAAGVSGPAVYRHFQNKDAILRELCDAAMTELLAGARRATNAGTPTEVL
HALVDLHAAFGARRRGLLAVYAREHRSLSPLATRALRRRQHRYESFWVDALVRARGDLDRERAQGLVAAVLSLLNASAYM
PASLDDATIEAMLAAAAVAALFSRAVTQQVDGAPHRI

Sequences:

>Translated_197_residues
MAGLRRKLLLEAAADLFARQGFHAVGIDDIGAAAGVSGPAVYRHFQNKDAILRELCDAAMTELLAGARRATNAGTPTEVL
HALVDLHAAFGARRRGLLAVYAREHRSLSPLATRALRRRQHRYESFWVDALVRARGDLDRERAQGLVAAVLSLLNASAYM
PASLDDATIEAMLAAAAVAALFSRAVTQQVDGAPHRI
>Mature_196_residues
AGLRRKLLLEAAADLFARQGFHAVGIDDIGAAAGVSGPAVYRHFQNKDAILRELCDAAMTELLAGARRATNAGTPTEVLH
ALVDLHAAFGARRRGLLAVYAREHRSLSPLATRALRRRQHRYESFWVDALVRARGDLDRERAQGLVAAVLSLLNASAYMP
ASLDDATIEAMLAAAAVAALFSRAVTQQVDGAPHRI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21187; Mature: 21055

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGLRRKLLLEAAADLFARQGFHAVGIDDIGAAAGVSGPAVYRHFQNKDAILRELCDAAM
CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHH
TELLAGARRATNAGTPTEVLHALVDLHAAFGARRRGLLAVYAREHRSLSPLATRALRRRQ
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHH
HRYESFWVDALVRARGDLDRERAQGLVAAVLSLLNASAYMPASLDDATIEAMLAAAAVAA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
LFSRAVTQQVDGAPHRI
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AGLRRKLLLEAAADLFARQGFHAVGIDDIGAAAGVSGPAVYRHFQNKDAILRELCDAAM
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHH
TELLAGARRATNAGTPTEVLHALVDLHAAFGARRRGLLAVYAREHRSLSPLATRALRRRQ
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHH
HRYESFWVDALVRARGDLDRERAQGLVAAVLSLLNASAYMPASLDDATIEAMLAAAAVAA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
LFSRAVTQQVDGAPHRI
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA