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The map label for this gene is insF1 [C]

Identifier: 119869274

GI number: 119869274

Start: 3399654

End: 3400094

Strand: Direct

Name: insF1 [C]

Synonym: Mkms_3242

Alternate gene names: 119869274

Gene position: 3399654-3400094 (Clockwise)

Preceding gene: 119869264

Following gene: 119869284

Centisome position: 59.26

GC content: 60.32

Gene sequence:

>441_bases
ATGATCGTGGGCTGGCGGGTAGCGTCGCACATGCGTACCACCATGGTGCTGGATGCGTTGGAGATGGCTCGTTGGTCACG
CGGAAACACATTGCCGGGCTTGACATGTCACTCCGATGCCGGATCGCAATTCACCTCTATCCGCTATGGCGAACGGCTCG
CCGAGATCGGAGCGGTCCGCTCGATCGGCACGATCGGAGACAGCTACGATAATGCCCTGGAGACGGTGAACGGCTACTAC
AAGGCGGAGCTGATCTACGGGCCAGTCCGCACCAGGCCGTGGAAGACCGTCGAGGACGTCGAACTCGCGACCCTGAGCTG
GGTGTACTGGCACAACACCAGCCGCTTACACAGCTACCTTAATGACATCCCACCCACCGAGTTCGAAGCCGCGTTCCACG
ATGCACATGGGACCGACCAACCCCTGGCCGGAATCCAATAA

Upstream 100 bases:

>100_bases
CGAAATTCACGGGGGTAGGGCCTAGGCACACTGACATCCTTCCAGCCCGCCCGCTTTGGGCAAGCCAACTCAGATGTCAC
CTATTGGTGCAGCAGACCCG

Downstream 100 bases:

>100_bases
CCCGAGCCTCCGGGAAAGTCAGGGCGATTCAATCAAGTAGCTAGAGTCCGATACGTTTGGCGATGACCTCGTTCATGATT
TCGTTGGTGCCGCCGCCTAT

Product: putative transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MIVGWRVASHMRTTMVLDALEMARWSRGNTLPGLTCHSDAGSQFTSIRYGERLAEIGAVRSIGTIGDSYDNALETVNGYY
KAELIYGPVRTRPWKTVEDVELATLSWVYWHNTSRLHSYLNDIPPTEFEAAFHDAHGTDQPLAGIQ

Sequences:

>Translated_146_residues
MIVGWRVASHMRTTMVLDALEMARWSRGNTLPGLTCHSDAGSQFTSIRYGERLAEIGAVRSIGTIGDSYDNALETVNGYY
KAELIYGPVRTRPWKTVEDVELATLSWVYWHNTSRLHSYLNDIPPTEFEAAFHDAHGTDQPLAGIQ
>Mature_146_residues
MIVGWRVASHMRTTMVLDALEMARWSRGNTLPGLTCHSDAGSQFTSIRYGERLAEIGAVRSIGTIGDSYDNALETVNGYY
KAELIYGPVRTRPWKTVEDVELATLSWVYWHNTSRLHSYLNDIPPTEFEAAFHDAHGTDQPLAGIQ

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=86, Percent_Identity=56.9767441860465, Blast_Score=85, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 16372; Mature: 16372

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVGWRVASHMRTTMVLDALEMARWSRGNTLPGLTCHSDAGSQFTSIRYGERLAEIGAVR
CEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHH
SIGTIGDSYDNALETVNGYYKAELIYGPVRTRPWKTVEDVELATLSWVYWHNTSRLHSYL
HHCCCCCCHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCHHEEEEEEEECCHHHHHHHH
NDIPPTEFEAAFHDAHGTDQPLAGIQ
HCCCCCHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MIVGWRVASHMRTTMVLDALEMARWSRGNTLPGLTCHSDAGSQFTSIRYGERLAEIGAVR
CEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHH
SIGTIGDSYDNALETVNGYYKAELIYGPVRTRPWKTVEDVELATLSWVYWHNTSRLHSYL
HHCCCCCCHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCHHEEEEEEEECCHHHHHHHH
NDIPPTEFEAAFHDAHGTDQPLAGIQ
HCCCCCHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]