| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119869263
Identifier: 119869263
GI number: 119869263
Start: 3389681
End: 3390481
Strand: Direct
Name: 119869263
Synonym: Mkms_3231
Alternate gene names: NA
Gene position: 3389681-3390481 (Clockwise)
Preceding gene: 119869256
Following gene: 119869264
Centisome position: 59.08
GC content: 65.17
Gene sequence:
>801_bases ATGGACGAGCAGGACGGCACCGAGGCCGCCATCACTCCCAACGATCGCCTCGCGCAGCGGCTACAGGCCAAAGGTCTGTC CTCGCAGCGGTTCGCCACCGCGGTGGGTGTCGATATCAAGTCGGTGCGACGCTGGCTGGCCGATAGCGACTACAGAATTC GCGAACACAACGCCCGCAGCGCCAGCGAGGTGCTCGACTGCACTCCGCATGACCTGTGGCCCAAGCAGTACCCGGCCGCT ACCCCCCGTGCAGTGACAACAGCGTCTGCGGGTGGGCCATTCACCGCGACCCTGTATGCCAGCCGTACTCAGCTGCCGAT CACGACGTGGCAGCAGCATTTCGCCGACGCCACCACCGGCATCGACATCCTCGTGCTCGCGGCCACGTTCCTGTTCGACA CCCTCGACGGATTCCTCGACACCCTGCTCGCCGCCGCCGCCCGCGGTGTGTCGGTGCGGTTTCTCGTCGGGGATCCCGAC ACTGCGACCACGATCTTGCGCGGTGAGGAGGAAGGGATCGGCGAGGCTGTCATCGCCCGCTGCCGCACGTCGGTGGAGTT GCTCGCCCCTCACGCTTGTACCCCGGGGCTGGACATTCGCACCCACGACACCGCGCTCTACACGTCGATCTTTCGGGTCG ATGACGCCATGATTGTCAACTTCCACATCTACGGCTCACCCGGGCGCAACAACCCTGTGCTGGTTCTGTCACGTCACCAT GAGCCAAGGCTCTGGACCACCCTCGAAGACGCTTTCACCCAGGTCTGGAACCGCGCCAGACCGCTGACCGCGAAAGGCTG A
Upstream 100 bases:
>100_bases CCGACACTATCGCCGCAGGGTGGCGGCAATCGCATGGCAAACTAGACACCACGCGCTGAAGGATGGATACGGACGACACG GGAAGATGTGCGCTGACACG
Downstream 100 bases:
>100_bases CCCCCGATGCGCACCGACTACTACAATGACCCCAACGCCCCGGCGCCCAACAGTGTCGTTCCGTCCGCCTCGGCCATCGT CACCGACGAACAAGGTCGTA
Product: helix-turn-helix domain-containing protein
Products: NA
Alternate protein names: XRE Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator XRE Family Protein
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MDEQDGTEAAITPNDRLAQRLQAKGLSSQRFATAVGVDIKSVRRWLADSDYRIREHNARSASEVLDCTPHDLWPKQYPAA TPRAVTTASAGGPFTATLYASRTQLPITTWQQHFADATTGIDILVLAATFLFDTLDGFLDTLLAAAARGVSVRFLVGDPD TATTILRGEEEGIGEAVIARCRTSVELLAPHACTPGLDIRTHDTALYTSIFRVDDAMIVNFHIYGSPGRNNPVLVLSRHH EPRLWTTLEDAFTQVWNRARPLTAKG
Sequences:
>Translated_266_residues MDEQDGTEAAITPNDRLAQRLQAKGLSSQRFATAVGVDIKSVRRWLADSDYRIREHNARSASEVLDCTPHDLWPKQYPAA TPRAVTTASAGGPFTATLYASRTQLPITTWQQHFADATTGIDILVLAATFLFDTLDGFLDTLLAAAARGVSVRFLVGDPD TATTILRGEEEGIGEAVIARCRTSVELLAPHACTPGLDIRTHDTALYTSIFRVDDAMIVNFHIYGSPGRNNPVLVLSRHH EPRLWTTLEDAFTQVWNRARPLTAKG >Mature_266_residues MDEQDGTEAAITPNDRLAQRLQAKGLSSQRFATAVGVDIKSVRRWLADSDYRIREHNARSASEVLDCTPHDLWPKQYPAA TPRAVTTASAGGPFTATLYASRTQLPITTWQQHFADATTGIDILVLAATFLFDTLDGFLDTLLAAAARGVSVRFLVGDPD TATTILRGEEEGIGEAVIARCRTSVELLAPHACTPGLDIRTHDTALYTSIFRVDDAMIVNFHIYGSPGRNNPVLVLSRHH EPRLWTTLEDAFTQVWNRARPLTAKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29167; Mature: 29167
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEQDGTEAAITPNDRLAQRLQAKGLSSQRFATAVGVDIKSVRRWLADSDYRIREHNARS CCCCCCCCEEECCCHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHCCCCCEEHHCCCCC ASEVLDCTPHDLWPKQYPAATPRAVTTASAGGPFTATLYASRTQLPITTWQQHFADATTG HHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCC IDILVLAATFLFDTLDGFLDTLLAAAARGVSVRFLVGDPDTATTILRGEEEGIGEAVIAR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEECCCCCHHHHHHHH CRTSVELLAPHACTPGLDIRTHDTALYTSIFRVDDAMIVNFHIYGSPGRNNPVLVLSRHH HHHHHHHHCCCCCCCCCCEEECCHHHHHHHHEECCEEEEEEEEECCCCCCCCEEEEECCC EPRLWTTLEDAFTQVWNRARPLTAKG CCCHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MDEQDGTEAAITPNDRLAQRLQAKGLSSQRFATAVGVDIKSVRRWLADSDYRIREHNARS CCCCCCCCEEECCCHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHCCCCCEEHHCCCCC ASEVLDCTPHDLWPKQYPAATPRAVTTASAGGPFTATLYASRTQLPITTWQQHFADATTG HHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCC IDILVLAATFLFDTLDGFLDTLLAAAARGVSVRFLVGDPDTATTILRGEEEGIGEAVIAR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEECCCCCHHHHHHHH CRTSVELLAPHACTPGLDIRTHDTALYTSIFRVDDAMIVNFHIYGSPGRNNPVLVLSRHH HHHHHHHHCCCCCCCCCCEEECCHHHHHHHHEECCEEEEEEEEECCCCCCCCEEEEECCC EPRLWTTLEDAFTQVWNRARPLTAKG CCCHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA