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The map label for this gene is ydjX [C]

Identifier: 119869217

GI number: 119869217

Start: 3345881

End: 3346648

Strand: Direct

Name: ydjX [C]

Synonym: Mkms_3185

Alternate gene names: 119869217

Gene position: 3345881-3346648 (Clockwise)

Preceding gene: 119869212

Following gene: 119869221

Centisome position: 58.32

GC content: 70.96

Gene sequence:

>768_bases
GTGCCGGACCCCGCGCGACGGCATGTGGCCGTAGGCTTGGTGAACGTGAAAGCCGTCGTCAGGACCTTGCAGGCAGTGCA
GGCGGTGCGGGCCACGGTGGCCGCCGCCGCCCTGCAGGTTCCCCGTCGGCGCCTCATCGCGATCGCCGCGGCGATTGTGA
TTCTCGTCGCAGTGGCCTGGTGGGTGCCGATCCCGAACGCGCTGGAGCTGCGGGACTGGGCGACGTCGGTGGGCGCCTGG
TTTCCGCTGGTCTTCCTGGCCACCCACATCGTGGTGACGACGCTGCCGTTCCCCCGCACGGCGTTCACCCTCGCCGCCGG
TCTGCTGTTCGGCCCGCTGCTCGGCATCGCGATCGCGGTCGCGGCCAGCACCGTCAGCGCGCTGCTGGCGGTGCTGTTCA
TCCGCGCACTGGGCTGGCAGCTGAACAACCTGGTCAGCCATCCCGCGGTCGACCGGATCGACGTGCGGTTACGGCGCCGC
GGCTGGCCGTCGGTGATCGCTCTGCGGCTGATCCCGGCTGTGCCGTTCGCCGTGCTGAACTACGCGGCGGGTGCGTCGGC
GGTGCGCCTGCTCCCCTATTCGCTGGCGACGTTCTTCGGCCTGCTGCCGGGCACGGCGGCGGTTGTGGTCCTCGGCGATG
CGCTCACCGGCCGCGTCAACCCACTGCTGGTGCTGATCTCGGCCGCGACCGCGAGCATCGGCGTCTTCGTCCTGCTCTAC
GAGAACCGCGTACAGCGGCGCAGACCGGCACCGGTCACGGTGTCCTGA

Upstream 100 bases:

>100_bases
GCACAGACACCGGCATCTCCTGTTGTCGCAGCGTGTGACTGACGTATCCGCCATCAGGCTAAATGATGGCGGTCACCGCG
CTGCCCGCCGGTCGGCCGAC

Downstream 100 bases:

>100_bases
CGTCGGGACCCTTCACGGTCATCGCGCCGAACAGCACGAGCAGCGACGAGGCCGCGGCCAGACCCGGGCTCCAGTCCCTG
GCCCGGACGTGGGAACCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MPDPARRHVAVGLVNVKAVVRTLQAVQAVRATVAAAALQVPRRRLIAIAAAIVILVAVAWWVPIPNALELRDWATSVGAW
FPLVFLATHIVVTTLPFPRTAFTLAAGLLFGPLLGIAIAVAASTVSALLAVLFIRALGWQLNNLVSHPAVDRIDVRLRRR
GWPSVIALRLIPAVPFAVLNYAAGASAVRLLPYSLATFFGLLPGTAAVVVLGDALTGRVNPLLVLISAATASIGVFVLLY
ENRVQRRRPAPVTVS

Sequences:

>Translated_255_residues
MPDPARRHVAVGLVNVKAVVRTLQAVQAVRATVAAAALQVPRRRLIAIAAAIVILVAVAWWVPIPNALELRDWATSVGAW
FPLVFLATHIVVTTLPFPRTAFTLAAGLLFGPLLGIAIAVAASTVSALLAVLFIRALGWQLNNLVSHPAVDRIDVRLRRR
GWPSVIALRLIPAVPFAVLNYAAGASAVRLLPYSLATFFGLLPGTAAVVVLGDALTGRVNPLLVLISAATASIGVFVLLY
ENRVQRRRPAPVTVS
>Mature_254_residues
PDPARRHVAVGLVNVKAVVRTLQAVQAVRATVAAAALQVPRRRLIAIAAAIVILVAVAWWVPIPNALELRDWATSVGAWF
PLVFLATHIVVTTLPFPRTAFTLAAGLLFGPLLGIAIAVAASTVSALLAVLFIRALGWQLNNLVSHPAVDRIDVRLRRRG
WPSVIALRLIPAVPFAVLNYAAGASAVRLLPYSLATFFGLLPGTAAVVVLGDALTGRVNPLLVLISAATASIGVFVLLYE
NRVQRRRPAPVTVS

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI87081964, Length=162, Percent_Identity=29.0123456790123, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 27061; Mature: 26929

Theoretical pI: Translated: 12.50; Mature: 12.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDPARRHVAVGLVNVKAVVRTLQAVQAVRATVAAAALQVPRRRLIAIAAAIVILVAVAW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WVPIPNALELRDWATSVGAWFPLVFLATHIVVTTLPFPRTAFTLAAGLLFGPLLGIAIAV
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
AASTVSALLAVLFIRALGWQLNNLVSHPAVDRIDVRLRRRGWPSVIALRLIPAVPFAVLN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
YAAGASAVRLLPYSLATFFGLLPGTAAVVVLGDALTGRVNPLLVLISAATASIGVFVLLY
HHCCCHHHHHHHHHHHHHHHHCCCHHEEEEECCHHCCCCCHHHHHHHHHHHHHHHHEEEE
ENRVQRRRPAPVTVS
HHHHHHCCCCCCCCC
>Mature Secondary Structure 
PDPARRHVAVGLVNVKAVVRTLQAVQAVRATVAAAALQVPRRRLIAIAAAIVILVAVAW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WVPIPNALELRDWATSVGAWFPLVFLATHIVVTTLPFPRTAFTLAAGLLFGPLLGIAIAV
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
AASTVSALLAVLFIRALGWQLNNLVSHPAVDRIDVRLRRRGWPSVIALRLIPAVPFAVLN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
YAAGASAVRLLPYSLATFFGLLPGTAAVVVLGDALTGRVNPLLVLISAATASIGVFVLLY
HHCCCHHHHHHHHHHHHHHHHCCCHHEEEEECCHHCCCCCHHHHHHHHHHHHHHHHEEEE
ENRVQRRRPAPVTVS
HHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]