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The map label for this gene is ybhR [C]

Identifier: 119869034

GI number: 119869034

Start: 3139592

End: 3140272

Strand: Direct

Name: ybhR [C]

Synonym: Mkms_3002

Alternate gene names: 119869034

Gene position: 3139592-3140272 (Clockwise)

Preceding gene: 119869033

Following gene: 119869035

Centisome position: 54.72

GC content: 66.96

Gene sequence:

>681_bases
ATGATCCTGCTCGTACCGAGCGTGATCATCACCTTGATCTACTTCATGTTCGCCGACGTACCGCATGCACCCGGCACGCC
GTCACCGTTCACCAACGCCTGCCTGATCATGCTCGGGGTGTTTCCGCTCATCGTGATGTTCCTCATCACGTCGATCACCA
TGCAGCGGGAACGGGTGTCGGGAACGCTCGAGCGGATCCTGGCCACTCCCCTGCGCCGGGCCGATCTACTCGCCGCCTAC
GGCACCGCCTTCTCGCTCGCGGCGGCGGCCCAGGCCAGCCTGGCGTGCGTGGTCGCGTTCTGGTTTCTGGGCTTCGAGAC
CGCGGGCAGCCCGCTTCTGGTGATTGGCATCGCCATCGTCAACGCCGTGCTCGGCGTGGGGCTCGGGCTTCTGTGCAGCG
CCTTCGCCCGCACCGAGTTCCAGGCGGTCCAGTTCATGCCGCTGGTCATCGCCCCCCAGCTGCTGTTGTGCGGCATCATC
GTGCCGCGCAACGCCCTGCCCGAATGGCTGCAGTGGGTCAGCAACGTCATGCCGGCCAGCTACGCCCTGGAGGCGCTGCG
GGAGGTGAGCGCACACCCGGAACCGACGGCGACTGCGGTGCGGGACATCGCGATCGTGGTGGCTTTCGCGGTGGTGGCCA
TGTTCCTGGCCGCGGCCACCCTGCGACGAAGGACACCGTAG

Upstream 100 bases:

>100_bases
GCACCGCAGCCGGAGTCGCCACCGGCTGAGCCCTCAGGCGTACCTCGCCACCACCGGCCGGATCCTGCGTCAACTGCGCG
CCGACCACCGCAGCGTCGCG

Downstream 100 bases:

>100_bases
AAATTCGTGAGGACCAACGCTGAGCGGAAACGTCCCGGGCGCCCGCCCGGGACGTCCGACAATCGCGACCGGATACTCCA
GACTGCACGGGCGCTGTTCG

Product: multidrug ABC transporter inner membrane protein

Products: NA

Alternate protein names: ABC Transporter Permease Protein; ABC Transporter; ABC-Type Multidrug Transport System Permease Component; ABC Transporter Permease; Multidrug ABC Transporter Inner Membrane Protein; Multidrug ABC Transporter Permease; ABC Transporter Efflux Protein DrrB Family Protein; DrrB Family ABC Transporter; ABC Transporter Permease Component; Abc-2 Type Transporter Integral Membrane Subunit; DrrB Family ABC Transporter Efflux Protein; ABC Drug Efflux Pump Inner Membrane Subunit DrrB Family; Integral Membrane Protein; ABC Transporter ATPase And Permease Components; Drug Efflux ABC Transporter Inner Membrane Protein; ABC-Type Multidrug Transport System Protein; Abc-2 Type Transporter; ABC-Type Multidrug Transport System; Multidrug Resistance ABC Transporter Permease; Antibiotic Resistance ABC Transporter Efflux Protein; Antibiotic Transport System Permease; ABC Transporter ; ABC Transporter Subunit

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MILLVPSVIITLIYFMFADVPHAPGTPSPFTNACLIMLGVFPLIVMFLITSITMQRERVSGTLERILATPLRRADLLAAY
GTAFSLAAAAQASLACVVAFWFLGFETAGSPLLVIGIAIVNAVLGVGLGLLCSAFARTEFQAVQFMPLVIAPQLLLCGII
VPRNALPEWLQWVSNVMPASYALEALREVSAHPEPTATAVRDIAIVVAFAVVAMFLAAATLRRRTP

Sequences:

>Translated_226_residues
MILLVPSVIITLIYFMFADVPHAPGTPSPFTNACLIMLGVFPLIVMFLITSITMQRERVSGTLERILATPLRRADLLAAY
GTAFSLAAAAQASLACVVAFWFLGFETAGSPLLVIGIAIVNAVLGVGLGLLCSAFARTEFQAVQFMPLVIAPQLLLCGII
VPRNALPEWLQWVSNVMPASYALEALREVSAHPEPTATAVRDIAIVVAFAVVAMFLAAATLRRRTP
>Mature_226_residues
MILLVPSVIITLIYFMFADVPHAPGTPSPFTNACLIMLGVFPLIVMFLITSITMQRERVSGTLERILATPLRRADLLAAY
GTAFSLAAAAQASLACVVAFWFLGFETAGSPLLVIGIAIVNAVLGVGLGLLCSAFARTEFQAVQFMPLVIAPQLLLCGII
VPRNALPEWLQWVSNVMPASYALEALREVSAHPEPTATAVRDIAIVVAFAVVAMFLAAATLRRRTP

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787010, Length=146, Percent_Identity=26.7123287671233, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24166; Mature: 24166

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILLVPSVIITLIYFMFADVPHAPGTPSPFTNACLIMLGVFPLIVMFLITSITMQRERVS
CEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTLERILATPLRRADLLAAYGTAFSLAAAAQASLACVVAFWFLGFETAGSPLLVIGIAIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
NAVLGVGLGLLCSAFARTEFQAVQFMPLVIAPQLLLCGIIVPRNALPEWLQWVSNVMPAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHH
YALEALREVSAHPEPTATAVRDIAIVVAFAVVAMFLAAATLRRRTP
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MILLVPSVIITLIYFMFADVPHAPGTPSPFTNACLIMLGVFPLIVMFLITSITMQRERVS
CEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTLERILATPLRRADLLAAYGTAFSLAAAAQASLACVVAFWFLGFETAGSPLLVIGIAIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
NAVLGVGLGLLCSAFARTEFQAVQFMPLVIAPQLLLCGIIVPRNALPEWLQWVSNVMPAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHH
YALEALREVSAHPEPTATAVRDIAIVVAFAVVAMFLAAATLRRRTP
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA