| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is yngI [H]
Identifier: 119868967
GI number: 119868967
Start: 3070556
End: 3072232
Strand: Direct
Name: yngI [H]
Synonym: Mkms_2935
Alternate gene names: 119868967
Gene position: 3070556-3072232 (Clockwise)
Preceding gene: 119868966
Following gene: 119868968
Centisome position: 53.52
GC content: 68.63
Gene sequence:
>1677_bases ATGGTCATGGCCATGAGCGACGGTGGTGTGAGTTTCGATCTGTCGACCGTGTTCAAGACGGTCGCCGAAGCGGTTCCGGA CAACACGTTCCTGGTGTGGCGGGACCGCAGGCTCAGCTATGCCGAATCCGACGCCCGGGTGGATGGCGTCGCGCACTATC TGACATCGGTGGGCCTGGGCTGCCATACCAAACGCGATCGCCTGCAGGGGCACGAATCGGGGCAGGACCACCTGGGGATC TACCTGCGCAACGGCAACGAGTACCTCGAGGCGATGATCGGCAGCTACCGGGCCCGCGTCGCACCGTTCAACGTGAACTA CCGCTACGTCGACGAAGAACTCACCTATCTGCTCACCGACGCCGACGCGAAGGCTCTCGTCTACGCCGCGGAGTTCGCGC CGCAGGTCGCCGCGGTGCGGGACCGACTGCCGAACCTGCGGGTGCTGATCCAGGTCGCCGACGACTCCGGTAACGAACTG CTGCCCGGCGCAGTCGATTACGAGTCGATCGTCACCACGCCCGCACCTGCCGGTGGAATGCCGACGCCGACCGGCGACGA CCTCTACATCCTCTACACCGGCGGCACCACCGGAATGCCGAAGGGTGTGCTGTGGCGCCAGCACGACATCTTCCTGTCCT CGATGGGCGGCCGACCGTTCGGCAGCGACACGTTCCTGTCCTCATATGAGGAGCTCGCCGAACGGGCACGGGCCGGCGCG GGCGCGATGGGGCTGTTGATGATCCCGCCCTTCATGCACGGCGCCGCGCAGTGGGCCGCCTACAACGCGGTGACGATGGG CGGCAGGCTGGCCATCCCCGACCATGTCGACCGCCTCCACGCCGACGATGCGCTCCGCGTCGCCGCCCGCGAACGCGTGC TGAGCATCCCGATGGTCGGCGACGCGGTGGCCCGCCCCCTGCTCGACGAGATCGAGCGCGGCGACTACGACCTGTCGGGG CTCGTCACGCTGACCAACGGCGGCGCACCGCTGTCGCCGACGGTGCGCGACCGGATCCTGGCAGCATTGCCGCACGTCAT CGTCATGGACGCGGTGGGGTCCTCGGAGTCCGGCGCCCAGATGAGCACCTACGCCAGCGCCGGCGCCGAGGTCGAGGCCG CGACGTTCACACCGCAGAGCGACACCGCGGTGGTCTCCGCCGACTTCACGCGGGTTCTGCAACCCGGTGAGGGGCCGGGC TGGCTGGCACGGCGCGACCTCGTCCCCCTCGGATATCTCGGAGACGCAGCCAAAACCGCCAAGACCTTCCCCACCATCGA CGGGGTCCGCTGGTCGGTGCCCGGTGATCGCGCGAATGTGTTGGCGGACGGGCGGATCGAGCTACTGGGCCGCGATTCGG TGACCATCAACTCCGGCGGGGAGAAGATCTTCGCCGAGGAGGTGGAACGCGCGGTCGCGGCGCATCCGGCGGTGTACGAC GTCGTGGTGGTCGGCCGGCCCTCCGAGCGGTGGGGCAGCGAGGTCGTTGCGGTCGTGCAGCTCGCCGAGGGCGCCTCGGC GACCGACGAGGAACTCGCCGAGGTGTGTTCCCGGTCGATCGCCCGCTACAAGGTGCCGAAGGTGTTTCTCAGGGCCGAGA AGGTCGTCCGGTCGCCGGCGGGTAAGGCCGACTACCGCTGGGCGAAAGCCGTTGCCACGGAGAGCGTCAGCAGCTGA
Upstream 100 bases:
>100_bases CTGCTGTGCGTCGGCGCCAGGGGATGGCAGCCGACGGTGCTGACCGGCAGCGGTCTGCATCCGGCCTGACACTTCGACCA TACGATGTTCGCGTAGTTGT
Downstream 100 bases:
>100_bases CGACCGGGGCCGGTGGAAATTCCGCCCGGAGGCTCCCCCGTCACACGCTCGGGATGAAAGGATCATCTCGATGGATGTGC GCTCACGGAACAACGTCCGG
Product: acyl-CoA synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 558; Mature: 558
Protein sequence:
>558_residues MVMAMSDGGVSFDLSTVFKTVAEAVPDNTFLVWRDRRLSYAESDARVDGVAHYLTSVGLGCHTKRDRLQGHESGQDHLGI YLRNGNEYLEAMIGSYRARVAPFNVNYRYVDEELTYLLTDADAKALVYAAEFAPQVAAVRDRLPNLRVLIQVADDSGNEL LPGAVDYESIVTTPAPAGGMPTPTGDDLYILYTGGTTGMPKGVLWRQHDIFLSSMGGRPFGSDTFLSSYEELAERARAGA GAMGLLMIPPFMHGAAQWAAYNAVTMGGRLAIPDHVDRLHADDALRVAARERVLSIPMVGDAVARPLLDEIERGDYDLSG LVTLTNGGAPLSPTVRDRILAALPHVIVMDAVGSSESGAQMSTYASAGAEVEAATFTPQSDTAVVSADFTRVLQPGEGPG WLARRDLVPLGYLGDAAKTAKTFPTIDGVRWSVPGDRANVLADGRIELLGRDSVTINSGGEKIFAEEVERAVAAHPAVYD VVVVGRPSERWGSEVVAVVQLAEGASATDEELAEVCSRSIARYKVPKVFLRAEKVVRSPAGKADYRWAKAVATESVSS
Sequences:
>Translated_558_residues MVMAMSDGGVSFDLSTVFKTVAEAVPDNTFLVWRDRRLSYAESDARVDGVAHYLTSVGLGCHTKRDRLQGHESGQDHLGI YLRNGNEYLEAMIGSYRARVAPFNVNYRYVDEELTYLLTDADAKALVYAAEFAPQVAAVRDRLPNLRVLIQVADDSGNEL LPGAVDYESIVTTPAPAGGMPTPTGDDLYILYTGGTTGMPKGVLWRQHDIFLSSMGGRPFGSDTFLSSYEELAERARAGA GAMGLLMIPPFMHGAAQWAAYNAVTMGGRLAIPDHVDRLHADDALRVAARERVLSIPMVGDAVARPLLDEIERGDYDLSG LVTLTNGGAPLSPTVRDRILAALPHVIVMDAVGSSESGAQMSTYASAGAEVEAATFTPQSDTAVVSADFTRVLQPGEGPG WLARRDLVPLGYLGDAAKTAKTFPTIDGVRWSVPGDRANVLADGRIELLGRDSVTINSGGEKIFAEEVERAVAAHPAVYD VVVVGRPSERWGSEVVAVVQLAEGASATDEELAEVCSRSIARYKVPKVFLRAEKVVRSPAGKADYRWAKAVATESVSS >Mature_558_residues MVMAMSDGGVSFDLSTVFKTVAEAVPDNTFLVWRDRRLSYAESDARVDGVAHYLTSVGLGCHTKRDRLQGHESGQDHLGI YLRNGNEYLEAMIGSYRARVAPFNVNYRYVDEELTYLLTDADAKALVYAAEFAPQVAAVRDRLPNLRVLIQVADDSGNEL LPGAVDYESIVTTPAPAGGMPTPTGDDLYILYTGGTTGMPKGVLWRQHDIFLSSMGGRPFGSDTFLSSYEELAERARAGA GAMGLLMIPPFMHGAAQWAAYNAVTMGGRLAIPDHVDRLHADDALRVAARERVLSIPMVGDAVARPLLDEIERGDYDLSG LVTLTNGGAPLSPTVRDRILAALPHVIVMDAVGSSESGAQMSTYASAGAEVEAATFTPQSDTAVVSADFTRVLQPGEGPG WLARRDLVPLGYLGDAAKTAKTFPTIDGVRWSVPGDRANVLADGRIELLGRDSVTINSGGEKIFAEEVERAVAAHPAVYD VVVVGRPSERWGSEVVAVVQLAEGASATDEELAEVCSRSIARYKVPKVFLRAEKVVRSPAGKADYRWAKAVATESVSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI156151445, Length=568, Percent_Identity=25.5281690140845, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI187761345, Length=567, Percent_Identity=25.5731922398589, Blast_Score=100, Evalue=7e-21, Organism=Homo sapiens, GI187761343, Length=567, Percent_Identity=25.5731922398589, Blast_Score=100, Evalue=7e-21, Organism=Homo sapiens, GI38505220, Length=454, Percent_Identity=25.9911894273128, Blast_Score=92, Evalue=1e-18, Organism=Escherichia coli, GI145693145, Length=389, Percent_Identity=27.5064267352185, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1788107, Length=497, Percent_Identity=24.9496981891348, Blast_Score=83, Evalue=4e-17, Organism=Caenorhabditis elegans, GI71994694, Length=549, Percent_Identity=24.0437158469945, Blast_Score=103, Evalue=3e-22, Organism=Caenorhabditis elegans, GI71994703, Length=549, Percent_Identity=24.0437158469945, Blast_Score=103, Evalue=3e-22, Organism=Caenorhabditis elegans, GI71994690, Length=549, Percent_Identity=24.0437158469945, Blast_Score=102, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17560308, Length=562, Percent_Identity=24.3772241992883, Blast_Score=100, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17558820, Length=156, Percent_Identity=32.0512820512821, Blast_Score=66, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6319699, Length=546, Percent_Identity=22.5274725274725, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI24581924, Length=503, Percent_Identity=24.4532803180915, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI21355181, Length=498, Percent_Identity=21.0843373493976, Blast_Score=70, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: NA
Molecular weight: Translated: 59791; Mature: 59791
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMAMSDGGVSFDLSTVFKTVAEAVPDNTFLVWRDRRLSYAESDARVDGVAHYLTSVGLG CEEEEECCCCEEEHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCC CHTKRDRLQGHESGQDHLGIYLRNGNEYLEAMIGSYRARVAPFNVNYRYVDEELTYLLTD CCCCHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHEEEEECCCEEEECCCEEEEEEC ADAKALVYAAEFAPQVAAVRDRLPNLRVLIQVADDSGNELLPGAVDYESIVTTPAPAGGM CCCCEEEEEHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCC PTPTGDDLYILYTGGTTGMPKGVLWRQHDIFLSSMGGRPFGSDTFLSSYEELAERARAGA CCCCCCCEEEEEECCCCCCCCCCEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCC GAMGLLMIPPFMHGAAQWAAYNAVTMGGRLAIPDHVDRLHADDALRVAARERVLSIPMVG CCEEHEECCCHHHHHHHHHHHHEEEECCEEECCHHHHHHCCCHHHHHHHHHHEEECCCCC DAVARPLLDEIERGDYDLSGLVTLTNGGAPLSPTVRDRILAALPHVIVMDAVGSSESGAQ HHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCC MSTYASAGAEVEAATFTPQSDTAVVSADFTRVLQPGEGPGWLARRDLVPLGYLGDAAKTA HHHHHCCCCCEEEEEECCCCCCEEEECCHHHHCCCCCCCCCCHHCCCCCCCCCCCHHHHH KTFPTIDGVRWSVPGDRANVLADGRIELLGRDSVTINSGGEKIFAEEVERAVAAHPAVYD HCCCCCCCEEEECCCCCCCEEECCEEEEEECCEEEECCCCCHHHHHHHHHHHHCCCCEEE VVVVGRPSERWGSEVVAVVQLAEGASATDEELAEVCSRSIARYKVPKVFLRAEKVVRSPA EEEECCCCHHHHHHHEEEHHECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC GKADYRWAKAVATESVSS CCCCHHHHHHHHHHCCCC >Mature Secondary Structure MVMAMSDGGVSFDLSTVFKTVAEAVPDNTFLVWRDRRLSYAESDARVDGVAHYLTSVGLG CEEEEECCCCEEEHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCC CHTKRDRLQGHESGQDHLGIYLRNGNEYLEAMIGSYRARVAPFNVNYRYVDEELTYLLTD CCCCHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHEEEEECCCEEEECCCEEEEEEC ADAKALVYAAEFAPQVAAVRDRLPNLRVLIQVADDSGNELLPGAVDYESIVTTPAPAGGM CCCCEEEEEHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCC PTPTGDDLYILYTGGTTGMPKGVLWRQHDIFLSSMGGRPFGSDTFLSSYEELAERARAGA CCCCCCCEEEEEECCCCCCCCCCEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCC GAMGLLMIPPFMHGAAQWAAYNAVTMGGRLAIPDHVDRLHADDALRVAARERVLSIPMVG CCEEHEECCCHHHHHHHHHHHHEEEECCEEECCHHHHHHCCCHHHHHHHHHHEEECCCCC DAVARPLLDEIERGDYDLSGLVTLTNGGAPLSPTVRDRILAALPHVIVMDAVGSSESGAQ HHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCC MSTYASAGAEVEAATFTPQSDTAVVSADFTRVLQPGEGPGWLARRDLVPLGYLGDAAKTA HHHHHCCCCCEEEEEECCCCCCEEEECCHHHHCCCCCCCCCCHHCCCCCCCCCCCHHHHH KTFPTIDGVRWSVPGDRANVLADGRIELLGRDSVTINSGGEKIFAEEVERAVAAHPAVYD HCCCCCCCEEEECCCCCCCEEECCEEEEEECCEEEECCCCCHHHHHHHHHHHHCCCCEEE VVVVGRPSERWGSEVVAVVQLAEGASATDEELAEVCSRSIARYKVPKVFLRAEKVVRSPA EEEECCCCHHHHHHHEEEHHECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC GKADYRWAKAVATESVSS CCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9387222; 9384377 [H]