Definition Mycobacterium sp. KMS chromosome, complete genome.
Accession NC_008705
Length 5,737,227

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The map label for this gene is 119868870

Identifier: 119868870

GI number: 119868870

Start: 2959864

End: 2960598

Strand: Direct

Name: 119868870

Synonym: Mkms_2838

Alternate gene names: NA

Gene position: 2959864-2960598 (Clockwise)

Preceding gene: 119868869

Following gene: 119868871

Centisome position: 51.59

GC content: 68.98

Gene sequence:

>735_bases
ATGACTGCCGTTCACGCCCAACCGTCGACAATGCCCCGGATGCGGGTCTACCTCGACATCGCCATTGTTGTGGCAGTGCT
GGCGGCCACCAATCTCATCGCGCACTTCACTACCCCCTGGGCCAGCATCGCGACCGTGCCCGCAGCGGCGGTCGGATTGT
TGATCCTGGTCCGCAGGCGGGGACTGTGCTGGACCGAACTCGGACTCGGGCGCGAGCACTGGCGCTCGGGGGCCGGGTAC
GCCCTGGCGGCCGTGGCCGTGGTGGTGTCGGTGATCGCCGTCGGCCTCCTGCTGCCGTGGACCCGGCCGATGTTCATGAA
CAACAACTACGCGACGATCTCGGGCGCCTTGATCGCCTCGATGGTCGTGATCCCGCTGCAGACCGTGATTCCCGAGGAAC
TGGCCTTCCGCGGAGTGCTGCACGGGGCGCTGAACCGGGCCTGGGGGTTCCGCGGTGTGGCCGCGGCCGGATCCCTGCTG
TTCGGCCTGTGGCACATCGCCACGTCGCTGGGTCTGACCAGCAGCAATGTCGGCCTGACCCGGCTGTTCGGGGGCGGGGT
GCTGGGCACCGTGATCGGCGTGGTGCTCGCTGTCGTCGCGACCGGGATCGCGGGTTTCGTGTTCACCTGGCTGCGCAAGC
GAAGCGGCAGCCTGCTGGCGCCGATCGCGCTGCACTGGTCCCTGAACGGGATGGGCGCGCTGGCCGCCGCCCTGGTCTGG
CAACTGTCGGCCTGA

Upstream 100 bases:

>100_bases
TGGAGTTGGGACAGCGGTTACCGCGCCGACGGCACCCAGTCCATGGCACAGGACACCGGCGACAACGAGTGAGCGGTTCG
CGCCGGTAGAATCGGCGCGG

Downstream 100 bases:

>100_bases
GCGTCACCGTGTGGTGCGGTACCGCCCCCGTTGATAACGGTTCGGAGAAGTGTCACTGGTTCTATCATTGACGGGTCGGG
CTCGGTGACTACCGAAGGGA

Product: abortive infection protein

Products: NA

Alternate protein names: Protease; Peptidase; Conserved Integral Membrane Protein; Integral Membrane Protein; Conserved Membrane Protein

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MTAVHAQPSTMPRMRVYLDIAIVVAVLAATNLIAHFTTPWASIATVPAAAVGLLILVRRRGLCWTELGLGREHWRSGAGY
ALAAVAVVVSVIAVGLLLPWTRPMFMNNNYATISGALIASMVVIPLQTVIPEELAFRGVLHGALNRAWGFRGVAAAGSLL
FGLWHIATSLGLTSSNVGLTRLFGGGVLGTVIGVVLAVVATGIAGFVFTWLRKRSGSLLAPIALHWSLNGMGALAAALVW
QLSA

Sequences:

>Translated_244_residues
MTAVHAQPSTMPRMRVYLDIAIVVAVLAATNLIAHFTTPWASIATVPAAAVGLLILVRRRGLCWTELGLGREHWRSGAGY
ALAAVAVVVSVIAVGLLLPWTRPMFMNNNYATISGALIASMVVIPLQTVIPEELAFRGVLHGALNRAWGFRGVAAAGSLL
FGLWHIATSLGLTSSNVGLTRLFGGGVLGTVIGVVLAVVATGIAGFVFTWLRKRSGSLLAPIALHWSLNGMGALAAALVW
QLSA
>Mature_243_residues
TAVHAQPSTMPRMRVYLDIAIVVAVLAATNLIAHFTTPWASIATVPAAAVGLLILVRRRGLCWTELGLGREHWRSGAGYA
LAAVAVVVSVIAVGLLLPWTRPMFMNNNYATISGALIASMVVIPLQTVIPEELAFRGVLHGALNRAWGFRGVAAAGSLLF
GLWHIATSLGLTSSNVGLTRLFGGGVLGTVIGVVLAVVATGIAGFVFTWLRKRSGSLLAPIALHWSLNGMGALAAALVWQ
LSA

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25551; Mature: 25420

Theoretical pI: Translated: 12.11; Mature: 12.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAVHAQPSTMPRMRVYLDIAIVVAVLAATNLIAHFTTPWASIATVPAAAVGLLILVRRR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
GLCWTELGLGREHWRSGAGYALAAVAVVVSVIAVGLLLPWTRPMFMNNNYATISGALIAS
CCCHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHH
MVVIPLQTVIPEELAFRGVLHGALNRAWGFRGVAAAGSLLFGLWHIATSLGLTSSNVGLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
RLFGGGVLGTVIGVVLAVVATGIAGFVFTWLRKRSGSLLAPIALHWSLNGMGALAAALVW
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHEEEECCCCHHHHHHHHHH
QLSA
HCCC
>Mature Secondary Structure 
TAVHAQPSTMPRMRVYLDIAIVVAVLAATNLIAHFTTPWASIATVPAAAVGLLILVRRR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
GLCWTELGLGREHWRSGAGYALAAVAVVVSVIAVGLLLPWTRPMFMNNNYATISGALIAS
CCCHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHH
MVVIPLQTVIPEELAFRGVLHGALNRAWGFRGVAAAGSLLFGLWHIATSLGLTSSNVGLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
RLFGGGVLGTVIGVVLAVVATGIAGFVFTWLRKRSGSLLAPIALHWSLNGMGALAAALVW
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHEEEECCCCHHHHHHHHHH
QLSA
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA