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The map label for this gene is deoR [H]

Identifier: 119868866

GI number: 119868866

Start: 2954043

End: 2954963

Strand: Direct

Name: deoR [H]

Synonym: Mkms_2834

Alternate gene names: 119868866

Gene position: 2954043-2954963 (Clockwise)

Preceding gene: 119868855

Following gene: 119868867

Centisome position: 51.49

GC content: 69.71

Gene sequence:

>921_bases
ATGGGACCGGACGAGTTGTTCCAGCGGGCGGTGATCGCGCGCCGCTACTACCTCGAGGGGCGGACGAGGATCCAGATCGC
CGAGGAGTTCGGACTCTCCCGGTTCAAGGTCGCGCGAATGCTCGACGAGGCCCTCGAATCCGGGATGGTGGAGATCAAGA
TCCACAACCCCGGCGCGGTCGACGTCGACCTGTCCACCGAACTGCAGCGCCGCTACGGCCTCGAGCACGCCTACGCCGTC
GCGTGCGACACCTCCACCGCAGCCGACCGCATCGAAGCCGTGGCCAAGGCGATGGCCGAGTTGCTGCAGTCGATCCTGCG
GAACGGCGACGTGGTGGGGGTCGACTGCGGGCGCACGCTCACCCACATCGCCGCGCACCTGACGTCGTTGCCGCCGTGCG
ATGTCGTCCAACTCACCGGGATGGCCGGCGCGATCACCTCGAACGGGGCCGACCTGGTCCGCCGGATCAGCGAGATCAGC
GGGGGCCGCTCCTGGCCGATGTACGTGCCGCTCGTGGTGCCCGATGCGCGCACCGCCGAAAGCCTCAGCGGCAACCAGCA
ATTGCAGGAGACGGTGGCCCGGCACCGTGACGTCAGTTGCGCCATCATCTCCGTGGGCGCCTGGAGTCCCGGCGCCTCAC
AGGTGTACCAGTCGCTGACGCCCGAGGAGATCGGGGCACTCGACGCCGCCGGTGTCTGCGCCGAGACGTGCGCCCTGCTG
CTCGACGCCGACGGCAACCGCGTCCCCGGCCTCGACGAGCGGCGGATGGGGATCGCCGAGGACACCCTGCGGTCCATCCC
GACGAGGATCGCGCTCGCGACCGGCCCCGAGAAGATCGACGCGACCCGTGCGGTCCTGCGGTCCGGGCTGGTCTCGTCTC
TGGTCACCGACATCGACGTGGCCGCCGCGGTACTGAACTGA

Upstream 100 bases:

>100_bases
TGAGGGGTTGTGGTCTGGATCATGCAATGGCTTATGCTCATATGTCAACGACGGTGCACATATGTGCACACTGCTCGGGG
TTTGCTGAGGAGGCGGCGCC

Downstream 100 bases:

>100_bases
ATCCCGTACTCCCCCAGGAAAGGACGACATGACCGACGCCGAAATGACCGTGGATCTCGACTTCTCACTGACCGGGAAGG
TCGCACTGGTCACCGGCGGC

Product: DeoR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MGPDELFQRAVIARRYYLEGRTRIQIAEEFGLSRFKVARMLDEALESGMVEIKIHNPGAVDVDLSTELQRRYGLEHAYAV
ACDTSTAADRIEAVAKAMAELLQSILRNGDVVGVDCGRTLTHIAAHLTSLPPCDVVQLTGMAGAITSNGADLVRRISEIS
GGRSWPMYVPLVVPDARTAESLSGNQQLQETVARHRDVSCAIISVGAWSPGASQVYQSLTPEEIGALDAAGVCAETCALL
LDADGNRVPGLDERRMGIAEDTLRSIPTRIALATGPEKIDATRAVLRSGLVSSLVTDIDVAAAVLN

Sequences:

>Translated_306_residues
MGPDELFQRAVIARRYYLEGRTRIQIAEEFGLSRFKVARMLDEALESGMVEIKIHNPGAVDVDLSTELQRRYGLEHAYAV
ACDTSTAADRIEAVAKAMAELLQSILRNGDVVGVDCGRTLTHIAAHLTSLPPCDVVQLTGMAGAITSNGADLVRRISEIS
GGRSWPMYVPLVVPDARTAESLSGNQQLQETVARHRDVSCAIISVGAWSPGASQVYQSLTPEEIGALDAAGVCAETCALL
LDADGNRVPGLDERRMGIAEDTLRSIPTRIALATGPEKIDATRAVLRSGLVSSLVTDIDVAAAVLN
>Mature_305_residues
GPDELFQRAVIARRYYLEGRTRIQIAEEFGLSRFKVARMLDEALESGMVEIKIHNPGAVDVDLSTELQRRYGLEHAYAVA
CDTSTAADRIEAVAKAMAELLQSILRNGDVVGVDCGRTLTHIAAHLTSLPPCDVVQLTGMAGAITSNGADLVRRISEISG
GRSWPMYVPLVVPDARTAESLSGNQQLQETVARHRDVSCAIISVGAWSPGASQVYQSLTPEEIGALDAAGVCAETCALLL
DADGNRVPGLDERRMGIAEDTLRSIPTRIALATGPEKIDATRAVLRSGLVSSLVTDIDVAAAVLN

Specific function: Negative regulator of the dra-nupC-pdp operon. DeoR binds cooperatively to the operator DNA, which consists of a palindrome and a direct repeat sequence located 3' to the palindrome [H]

COG id: COG2390

COG function: function code K; Transcriptional regulator, contains sigma factor-related N-terminal domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sorC transcriptional regulatory family [H]

Homologues:

Organism=Escherichia coli, GI1787791, Length=304, Percent_Identity=24.3421052631579, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI87082414, Length=302, Percent_Identity=27.1523178807947, Blast_Score=89, Evalue=5e-19,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR007630
- InterPro:   IPR007324
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04545 Sigma70_r4; PF04198 Sugar-bind [H]

EC number: NA

Molecular weight: Translated: 32663; Mature: 32531

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPDELFQRAVIARRYYLEGRTRIQIAEEFGLSRFKVARMLDEALESGMVEIKIHNPGAV
CCHHHHHHHHHHHHHHHHCCCCEEEEHHHHCCHHHHHHHHHHHHHHCCEEEEEEECCCEE
DVDLSTELQRRYGLEHAYAVACDTSTAADRIEAVAKAMAELLQSILRNGDVVGVDCGRTL
EEEHHHHHHHHHCCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHH
THIAAHLTSLPPCDVVQLTGMAGAITSNGADLVRRISEISGGRSWPMYVPLVVPDARTAE
HHHHHHHHCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHH
SLSGNQQLQETVARHRDVSCAIISVGAWSPGASQVYQSLTPEEIGALDAAGVCAETCALL
HCCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHCCCHHHHCCCCHHHHHHHHHHHH
LDADGNRVPGLDERRMGIAEDTLRSIPTRIALATGPEKIDATRAVLRSGLVSSLVTDIDV
CCCCCCCCCCCCHHHCCHHHHHHHHCCHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
AAAVLN
HHHHCC
>Mature Secondary Structure 
GPDELFQRAVIARRYYLEGRTRIQIAEEFGLSRFKVARMLDEALESGMVEIKIHNPGAV
CHHHHHHHHHHHHHHHHCCCCEEEEHHHHCCHHHHHHHHHHHHHHCCEEEEEEECCCEE
DVDLSTELQRRYGLEHAYAVACDTSTAADRIEAVAKAMAELLQSILRNGDVVGVDCGRTL
EEEHHHHHHHHHCCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHH
THIAAHLTSLPPCDVVQLTGMAGAITSNGADLVRRISEISGGRSWPMYVPLVVPDARTAE
HHHHHHHHCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHH
SLSGNQQLQETVARHRDVSCAIISVGAWSPGASQVYQSLTPEEIGALDAAGVCAETCALL
HCCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHCCCHHHHCCCCHHHHHHHHHHHH
LDADGNRVPGLDERRMGIAEDTLRSIPTRIALATGPEKIDATRAVLRSGLVSSLVTDIDV
CCCCCCCCCCCCHHHCCHHHHHHHHCCHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
AAAVLN
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8550462; 8867804; 9384377; 10074062; 10714997 [H]