| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
Click here to switch to the map view.
The map label for this gene is 119868770
Identifier: 119868770
GI number: 119868770
Start: 2863849
End: 2864985
Strand: Direct
Name: 119868770
Synonym: Mkms_2738
Alternate gene names: NA
Gene position: 2863849-2864985 (Clockwise)
Preceding gene: 119868769
Following gene: 119868771
Centisome position: 49.92
GC content: 72.3
Gene sequence:
>1137_bases ATGCAGCTCCCGCAGTCGAATCCGGACCTACCGCACCTCGCCGACGTGGTCCCCTCGGTGCTCGCGGCGATGGAGGTGCC CGGCTTCGACGCGCGGATCGACCTACCGACCGGGATCGGCTCCGCGTGTGTCCTGCTCATCGACGGGCTCGGCGCCGAAC TACTCGCTCGGCACGCCGACGATGCGCCGGTCCTGAGCGGTCTGCGCGGCGACACCCTGCAGGTCGGCTTCCCGTCCACC ACGGTCGCCAGCCTGGCCTCCGTCGGGACGGGGTGCCGCTCCGGGGCGCACGGCATGGTGGGCTACACGTTCCGCATGCC CGGTACCGGTGTGGTGAACCCGCTGCGCTGGCGTCCCCACCCCTGGGGTGAGGATCTACGCGAGTCGATGCCACCCGAGA CGGTGCAGCCGATGCCGACGGCCTTCGAACGCGCGGCGTCGGCCGGCGTCGCCGTGCACGTCGTGTCGAACGCGGAGTTC GCCGGTTCGGGCCTGACCCGCGCGGTGCTACGCGGTGGGCGTTTCATCGGCGTACACGGACTCGGTGACCTCGCAGCCTC GGTGCGTCGGGCCCTCACCGACGGCGGATTCTGTTACGGCTACCACGGCGACCTCGATCTGCTCGGGCATCTGTACGGGC CGGGGTCGACAGCGTGGCGCCTGCAGCTACGCCAGGTCGACCGGCTGGTCGAGTCGGTGGTCACCGGGTTGCCGCCGGGT GCGCTGCTCGCCGTGGTCGCCGACCACGGGATGGTGGAGGTCGATCCGGGCCGCACCCTCGATCTCGACGCGTGCGCACC TCTGTTCGACGGCGTCGAGGCGGTCGCGGGGGAAGCGCGTGCCCGCTATGTCTACGTCGCCGAGGGTGCGACGGCCACGG TGCTGGCGGCGTGGCGGGAGACGCTCGGCGACCGGGCCTGGGTCACCACCCGCGACGAAGCCATCGAGGCCGGCTGGTTC GGCGCCCGGGTGGCCGACGAAATGCGCCCGCGGATCGGTGACATCGTGGTCGCGGCAAGGGATTCCGCGGCGCTGGTGCG TCGCACGGTGGAGCCGATGGAGTCGGCGCTGCGGGGCCAGCACGGCTCGCTGACCGATGCCGAACAGCGGGTCCCCCTGC TGCTCGCGCACGCCTGA
Upstream 100 bases:
>100_bases CTCCCCCCGGCGCCCCGTTGCCGCCGCCTCCCCCCGGCGCCCCGTTGCCGCCGCCGCCGGTGGCCGCGTGACCGACCACC CGGTGTGACACGCTGCTGGA
Downstream 100 bases:
>100_bases ACGTCGCGCGGGTGTGATCTTCGCGCACCGCGGGTACGTCGGCACCGATGCAGACCTTCCTGCCCTGCGAGGATTTCGAC GCCAGCGCCGAGGTGCTCGA
Product: type I phosphodiesterase/nucleotide pyrophosphatase
Products: NA
Alternate protein names: Phosphodiesterase; Type I Phosphodiesterase / Nucleotide Pyrophosphatase; AP Superfamily Protein; Nucleotide Pyrophosphatase; Truncated Phosphodiesterase; Protein Of AP Superfamily; Phosphodiesterase/Nucleotide Pyrophosphatase; LOW QUALITY PROTEIN Phosphodiesterase
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MQLPQSNPDLPHLADVVPSVLAAMEVPGFDARIDLPTGIGSACVLLIDGLGAELLARHADDAPVLSGLRGDTLQVGFPST TVASLASVGTGCRSGAHGMVGYTFRMPGTGVVNPLRWRPHPWGEDLRESMPPETVQPMPTAFERAASAGVAVHVVSNAEF AGSGLTRAVLRGGRFIGVHGLGDLAASVRRALTDGGFCYGYHGDLDLLGHLYGPGSTAWRLQLRQVDRLVESVVTGLPPG ALLAVVADHGMVEVDPGRTLDLDACAPLFDGVEAVAGEARARYVYVAEGATATVLAAWRETLGDRAWVTTRDEAIEAGWF GARVADEMRPRIGDIVVAARDSAALVRRTVEPMESALRGQHGSLTDAEQRVPLLLAHA
Sequences:
>Translated_378_residues MQLPQSNPDLPHLADVVPSVLAAMEVPGFDARIDLPTGIGSACVLLIDGLGAELLARHADDAPVLSGLRGDTLQVGFPST TVASLASVGTGCRSGAHGMVGYTFRMPGTGVVNPLRWRPHPWGEDLRESMPPETVQPMPTAFERAASAGVAVHVVSNAEF AGSGLTRAVLRGGRFIGVHGLGDLAASVRRALTDGGFCYGYHGDLDLLGHLYGPGSTAWRLQLRQVDRLVESVVTGLPPG ALLAVVADHGMVEVDPGRTLDLDACAPLFDGVEAVAGEARARYVYVAEGATATVLAAWRETLGDRAWVTTRDEAIEAGWF GARVADEMRPRIGDIVVAARDSAALVRRTVEPMESALRGQHGSLTDAEQRVPLLLAHA >Mature_378_residues MQLPQSNPDLPHLADVVPSVLAAMEVPGFDARIDLPTGIGSACVLLIDGLGAELLARHADDAPVLSGLRGDTLQVGFPST TVASLASVGTGCRSGAHGMVGYTFRMPGTGVVNPLRWRPHPWGEDLRESMPPETVQPMPTAFERAASAGVAVHVVSNAEF AGSGLTRAVLRGGRFIGVHGLGDLAASVRRALTDGGFCYGYHGDLDLLGHLYGPGSTAWRLQLRQVDRLVESVVTGLPPG ALLAVVADHGMVEVDPGRTLDLDACAPLFDGVEAVAGEARARYVYVAEGATATVLAAWRETLGDRAWVTTRDEAIEAGWF GARVADEMRPRIGDIVVAARDSAALVRRTVEPMESALRGQHGSLTDAEQRVPLLLAHA
Specific function: Unknown
COG id: COG1524
COG function: function code R; Uncharacterized proteins of the AP superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39748; Mature: 39748
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLPQSNPDLPHLADVVPSVLAAMEVPGFDARIDLPTGIGSACVLLIDGLGAELLARHAD CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHCCCHHHHHHCCC DAPVLSGLRGDTLQVGFPSTTVASLASVGTGCRSGAHGMVGYTFRMPGTGVVNPLRWRPH CCHHHCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC PWGEDLRESMPPETVQPMPTAFERAASAGVAVHVVSNAEFAGSGLTRAVLRGGRFIGVHG CCCHHHHHCCCCCCCCCCCHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHCCCCEEEECC LGDLAASVRRALTDGGFCYGYHGDLDLLGHLYGPGSTAWRLQLRQVDRLVESVVTGLPPG HHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCH ALLAVVADHGMVEVDPGRTLDLDACAPLFDGVEAVAGEARARYVYVAEGATATVLAAWRE HHHHEECCCCEEEECCCCEECHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHH TLGDRAWVTTRDEAIEAGWFGARVADEMRPRIGDIVVAARDSAALVRRTVEPMESALRGQ HHCCCEEEEEHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCC HGSLTDAEQRVPLLLAHA CCCCCCHHHCCCEEEECC >Mature Secondary Structure MQLPQSNPDLPHLADVVPSVLAAMEVPGFDARIDLPTGIGSACVLLIDGLGAELLARHAD CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHCCCHHHHHHCCC DAPVLSGLRGDTLQVGFPSTTVASLASVGTGCRSGAHGMVGYTFRMPGTGVVNPLRWRPH CCHHHCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC PWGEDLRESMPPETVQPMPTAFERAASAGVAVHVVSNAEFAGSGLTRAVLRGGRFIGVHG CCCHHHHHCCCCCCCCCCCHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHCCCCEEEECC LGDLAASVRRALTDGGFCYGYHGDLDLLGHLYGPGSTAWRLQLRQVDRLVESVVTGLPPG HHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCH ALLAVVADHGMVEVDPGRTLDLDACAPLFDGVEAVAGEARARYVYVAEGATATVLAAWRE HHHHEECCCCEEEECCCCEECHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHH TLGDRAWVTTRDEAIEAGWFGARVADEMRPRIGDIVVAARDSAALVRRTVEPMESALRGQ HHCCCEEEEEHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCC HGSLTDAEQRVPLLLAHA CCCCCCHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA