| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is ycjP [C]
Identifier: 119868637
GI number: 119868637
Start: 2736523
End: 2737401
Strand: Direct
Name: ycjP [C]
Synonym: Mkms_2602
Alternate gene names: 119868637
Gene position: 2736523-2737401 (Clockwise)
Preceding gene: 119868636
Following gene: 119868638
Centisome position: 47.7
GC content: 63.59
Gene sequence:
>879_bases ATGGCACTCTTCCGCAGAAGTGAATTGACGCCCGGCCAGAAGCGGTTCTCGATCGGCTCGGTCGCGGCCGACGTGGGGCT GGTGTTCTGGTTCCTGTTCTCGCTGTTCCCGATCTTCTGGATGCTCATGCTGGCGCTCAAGAACGCCGAACAGCAGACCA CGACGTACTTCTCGTTCAGCCCCACGTGGTCGAACTTCGCAACGGTGCTCTCCGACAAGGGCACCCAGATGACCAGCGTG GACTTCAAGGCATCGCTGCTGACCAGCCTGATCAACTGTGGCGGCGCGGTGATCGTCTCGCTGGTGATCGGCATCCCGGC CGCGTACGCGGCCGGGCGCTGGCAGTACAAGGGCAGCAACGACCTGATGTTCCAGATGCTGTCGTTCCGGTTCGCCCCCG AACTCATGGTGATCGTGCCGCTGTTCGTGATCTACAACCAGATCGGGCTGTTCGACACCAAGGTCGGCATGATCTGGGTG CTGCAGCTGGTGACCATGCCGCTGGTGGTGTGGATCCTGCGGTCCTACTTCCAGGATCTCCCAGAGGATCTCGAGCAGGC CGCACTGCTCGACGGCTACACCCGCAAGCGGGCGTTCCTCATGGTGGCGTTGCCGATCGTGCGGCCCGGTATCGCGGCGG CCGCGCTGCTGGCCTTCATCTTCGCCTGGAACAACTACGTCTTCCCGCTCATCCTGGCCGACAGCAATGCCGGCACCGTC ACGGTCGCCATCACCAAGTTCCTCGGTGGCGGCGGCCAGGCGTACTACAACCTCACAGCCGCGGCGGCGATCATCGCGGC CCTCCCGCCCCTGATCCTGGCGCTGACCATTCAGCGCTACCTGGTACGGGGCCTGTCATTTGGGGCGGTGAAAGCCTGA
Upstream 100 bases:
>100_bases ACATGCTGCTGCTCTGGATCATCGTGTTCATCACCGCGCGCTACCTCGTCAGCGTGCTCGGCAAAGCGCAGCGCCGTGCT GCCGGAGCGGAGTCGTAACC
Downstream 100 bases:
>100_bases TGGCCACGGTATCTGTCGCCGATCTGCACAAATCTTTCGGCAAGACGCGAGCCGTCGACGGCGTGACCGTCGACATCGCC AACGGCGAGTTCTTCGTGAT
Product: binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MALFRRSELTPGQKRFSIGSVAADVGLVFWFLFSLFPIFWMLMLALKNAEQQTTTYFSFSPTWSNFATVLSDKGTQMTSV DFKASLLTSLINCGGAVIVSLVIGIPAAYAAGRWQYKGSNDLMFQMLSFRFAPELMVIVPLFVIYNQIGLFDTKVGMIWV LQLVTMPLVVWILRSYFQDLPEDLEQAALLDGYTRKRAFLMVALPIVRPGIAAAALLAFIFAWNNYVFPLILADSNAGTV TVAITKFLGGGGQAYYNLTAAAAIIAALPPLILALTIQRYLVRGLSFGAVKA
Sequences:
>Translated_292_residues MALFRRSELTPGQKRFSIGSVAADVGLVFWFLFSLFPIFWMLMLALKNAEQQTTTYFSFSPTWSNFATVLSDKGTQMTSV DFKASLLTSLINCGGAVIVSLVIGIPAAYAAGRWQYKGSNDLMFQMLSFRFAPELMVIVPLFVIYNQIGLFDTKVGMIWV LQLVTMPLVVWILRSYFQDLPEDLEQAALLDGYTRKRAFLMVALPIVRPGIAAAALLAFIFAWNNYVFPLILADSNAGTV TVAITKFLGGGGQAYYNLTAAAAIIAALPPLILALTIQRYLVRGLSFGAVKA >Mature_291_residues ALFRRSELTPGQKRFSIGSVAADVGLVFWFLFSLFPIFWMLMLALKNAEQQTTTYFSFSPTWSNFATVLSDKGTQMTSVD FKASLLTSLINCGGAVIVSLVIGIPAAYAAGRWQYKGSNDLMFQMLSFRFAPELMVIVPLFVIYNQIGLFDTKVGMIWVL QLVTMPLVVWILRSYFQDLPEDLEQAALLDGYTRKRAFLMVALPIVRPGIAAAALLAFIFAWNNYVFPLILADSNAGTVT VAITKFLGGGGQAYYNLTAAAAIIAALPPLILALTIQRYLVRGLSFGAVKA
Specific function: May participate in oleandomycin secretion during antibiotic production [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787571, Length=289, Percent_Identity=25.6055363321799, Blast_Score=107, Evalue=8e-25, Organism=Escherichia coli, GI1790464, Length=270, Percent_Identity=29.2592592592593, Blast_Score=94, Evalue=9e-21, Organism=Escherichia coli, GI1789860, Length=215, Percent_Identity=25.5813953488372, Blast_Score=83, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32102; Mature: 31971
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALFRRSELTPGQKRFSIGSVAADVGLVFWFLFSLFPIFWMLMLALKNAEQQTTTYFSFS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEC PTWSNFATVLSDKGTQMTSVDFKASLLTSLINCGGAVIVSLVIGIPAAYAAGRWQYKGSN CCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEECCCC DLMFQMLSFRFAPELMVIVPLFVIYNQIGLFDTKVGMIWVLQLVTMPLVVWILRSYFQDL HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PEDLEQAALLDGYTRKRAFLMVALPIVRPGIAAAALLAFIFAWNNYVFPLILADSNAGTV HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCEE TVAITKFLGGGGQAYYNLTAAAAIIAALPPLILALTIQRYLVRGLSFGAVKA EEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ALFRRSELTPGQKRFSIGSVAADVGLVFWFLFSLFPIFWMLMLALKNAEQQTTTYFSFS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEC PTWSNFATVLSDKGTQMTSVDFKASLLTSLINCGGAVIVSLVIGIPAAYAAGRWQYKGSN CCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEECCCC DLMFQMLSFRFAPELMVIVPLFVIYNQIGLFDTKVGMIWVLQLVTMPLVVWILRSYFQDL HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PEDLEQAALLDGYTRKRAFLMVALPIVRPGIAAAALLAFIFAWNNYVFPLILADSNAGTV HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCEE TVAITKFLGGGGQAYYNLTAAAAIIAALPPLILALTIQRYLVRGLSFGAVKA EEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8244027 [H]