| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119868512
Identifier: 119868512
GI number: 119868512
Start: 2599003
End: 2599779
Strand: Reverse
Name: 119868512
Synonym: Mkms_2477
Alternate gene names: NA
Gene position: 2599779-2599003 (Counterclockwise)
Preceding gene: 119868513
Following gene: 119868510
Centisome position: 45.31
GC content: 72.07
Gene sequence:
>777_bases ATGACGACCAACCAGTTCGCCCCGGGCACCTTCACGCCCGATCCGCGGCCCGCCGCCGTGCCGAAGATGCTGGCCGCCCA GTTCGGCCTCGAACTGCGGCTGCTGCTGCGCAACGGCGAGCAGTTGCTGCTGACGATGTTCATCCCGATCACCCTGCTCG TCGGCCTGATCCTGTTGCCGTTGGGCGACTTCGGCGACGACCGGGCGGGCACGTTCGTCCCCGCGATCATGGCGCTCGCG GTGATCTCAACGGCCTTCACGGGCCAGGCCATCGCTGTGGCGTTCGACCGTCGCTACGGCGCGCTGAAAAGGCTTGGGGC GACGGCACTTCCGGTGTGGGGCATCATCGCCGGCAAGTCGCTGGCGGTGGTGGCGGTGGTCTTCCTGCAGTCGGTCCTGC TGGGCGCCATCGGCATCGCGCTGGGATGGCGGCCGGAGGTGGTCGGGCTGGCCCTCGGCGGGGCGATCATCGCGCTGGGC ACCGCGGGGTTCGCGGCGCTGGGCCTGCTGCTCGGCGGCACCCTGCGCGCCGAGATCGTGCTGGCGGTCGCCAACCTGCT GTGGTTCGTGTTCGCGGGGCTGGGGGCGTTGACCCTCGAAGGTCAGGCGGTGCCCGGCGCGCTCGCGTGGGCTGCCCGGC TCACGCCGTCGGGCGCGCTGACCGAGGCGCTAACCCAGGCGATGGCGCTGTCGGTCGACTGGCTGGGGCTGGCCGTCCTC GCCGCGTGGGGCGGTGTGGCGGCGCTGTGCGCGCTGCGCTGGTTCCGCTTCACCTGA
Upstream 100 bases:
>100_bases CCTGGTGCGCACGCCTGGATGTGCTGGCCACCGACATGCGCGTCGAGCAGCGCAGCCTCGAAGACGTTTTCTTGGACCTG ACCGGCCGGGAGTTGCGGAA
Downstream 100 bases:
>100_bases GACCAGCGCGGGCAGCAGATACTCCAGCTGACCGACCTCCTCGATGTTGTGGCGCACCCAGGCGCGCATCTTGTCGTCGG GGAAGTGCCGGGTCACGAGC
Product: multidrug ABC transporter inner membrane protein
Products: NA
Alternate protein names: ABC Transporter Permease Protein; ABC-Type Multidrug Transport System Permease Component; Integral Membrane Transporter; Multidrug ABC Transporter Inner Membrane Protein; ABC Transport System Permease Protein; ABC Transporter Permease; ABC-Type Efflux System Permease; Multidrug ABC Transporter Permease; ABC Drug Efflux Pump Inner Membrane Subunit DrrB Family; ABC Transporter; ABC Transporter Protein; ABC Drug Resistance Transporter Inner Membrane Subunit; Abc-2 Type Transporter Integral Membrane Subunit; ABC Transporter Efflux Protein DrrB Family Protein; ABC Transporter Efflux Protein DrrB Family; ABC-2 Type Transport System Permease Protein; ABC Transporter Membrane Protein; Antibiotic ABC Transporter Transmembrane Protein
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MTTNQFAPGTFTPDPRPAAVPKMLAAQFGLELRLLLRNGEQLLLTMFIPITLLVGLILLPLGDFGDDRAGTFVPAIMALA VISTAFTGQAIAVAFDRRYGALKRLGATALPVWGIIAGKSLAVVAVVFLQSVLLGAIGIALGWRPEVVGLALGGAIIALG TAGFAALGLLLGGTLRAEIVLAVANLLWFVFAGLGALTLEGQAVPGALAWAARLTPSGALTEALTQAMALSVDWLGLAVL AAWGGVAALCALRWFRFT
Sequences:
>Translated_258_residues MTTNQFAPGTFTPDPRPAAVPKMLAAQFGLELRLLLRNGEQLLLTMFIPITLLVGLILLPLGDFGDDRAGTFVPAIMALA VISTAFTGQAIAVAFDRRYGALKRLGATALPVWGIIAGKSLAVVAVVFLQSVLLGAIGIALGWRPEVVGLALGGAIIALG TAGFAALGLLLGGTLRAEIVLAVANLLWFVFAGLGALTLEGQAVPGALAWAARLTPSGALTEALTQAMALSVDWLGLAVL AAWGGVAALCALRWFRFT >Mature_257_residues TTNQFAPGTFTPDPRPAAVPKMLAAQFGLELRLLLRNGEQLLLTMFIPITLLVGLILLPLGDFGDDRAGTFVPAIMALAV ISTAFTGQAIAVAFDRRYGALKRLGATALPVWGIIAGKSLAVVAVVFLQSVLLGAIGIALGWRPEVVGLALGGAIIALGT AGFAALGLLLGGTLRAEIVLAVANLLWFVFAGLGALTLEGQAVPGALAWAARLTPSGALTEALTQAMALSVDWLGLAVLA AWGGVAALCALRWFRFT
Specific function: Unknown
COG id: COG0842
COG function: function code V; ABC-type multidrug transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26582; Mature: 26451
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNQFAPGTFTPDPRPAAVPKMLAAQFGLELRLLLRNGEQLLLTMFIPITLLVGLILLP CCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC LGDFGDDRAGTFVPAIMALAVISTAFTGQAIAVAFDRRYGALKRLGATALPVWGIIAGKS CCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHCCCH LAVVAVVFLQSVLLGAIGIALGWRPEVVGLALGGAIIALGTAGFAALGLLLGGTLRAEIV HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LAVANLLWFVFAGLGALTLEGQAVPGALAWAARLTPSGALTEALTQAMALSVDWLGLAVL HHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH AAWGGVAALCALRWFRFT HHHHHHHHHHHHHHHHCC >Mature Secondary Structure TTNQFAPGTFTPDPRPAAVPKMLAAQFGLELRLLLRNGEQLLLTMFIPITLLVGLILLP CCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC LGDFGDDRAGTFVPAIMALAVISTAFTGQAIAVAFDRRYGALKRLGATALPVWGIIAGKS CCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHCCCH LAVVAVVFLQSVLLGAIGIALGWRPEVVGLALGGAIIALGTAGFAALGLLLGGTLRAEIV HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LAVANLLWFVFAGLGALTLEGQAVPGALAWAARLTPSGALTEALTQAMALSVDWLGLAVL HHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH AAWGGVAALCALRWFRFT HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA