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The map label for this gene is ypfJ [C]

Identifier: 119868387

GI number: 119868387

Start: 2464034

End: 2464924

Strand: Reverse

Name: ypfJ [C]

Synonym: Mkms_2351

Alternate gene names: 119868387

Gene position: 2464924-2464034 (Counterclockwise)

Preceding gene: 119868389

Following gene: 119868386

Centisome position: 42.96

GC content: 66.78

Gene sequence:

>891_bases
ATGACCTTCAACGAGGGCATGCAGATCGACACCAGTACCACCTCGAGCAGTGGCGGCGGGCGCGGCGGCGGACGCGGAAT
CGCGGTCGGTGGGGGCATCGGTGGTCTGCTGATCGTGGTCGTCGCGCTGTTCCTCGGTGTGGATCCCGGCACGGTGTTGC
CGGAACAACAGCAGATCGGCACCGAGGGCGTCCAGGCGCCGGGCTTCGACCTGAGCCAGTGCAAGACCGGTGCCGACGCC
AACGAGTTCGTGCAGTGCCGGGTGGTGGCGACCGGCAACTCCCTCGACGCGGTGTGGTCGCAGCTCAAACCGGATTACAC
GCGGCCGCAGGTGGAGATCTTCTCCGGGAGCGTGGACACCCGCTGCGGTCCGGCCACCAGCGCGGTCGGCCCGTTCTACT
GCCCGGCCGATCAGACCGCCTATTTCGACACCGACTTCTTCGACGTCCTGAGGGATCAGTTCGGTTCCAGCGGTGGACCT
TTCGCCCAGGAGTATGTCGTCGCCCATGAATTCGGCCACCACGTGCAGCAACTGCAGGGTTCGCTCGCACGAGCGCAGGA
GGATCCAGAGGGACCCACCGGCGGCGGGGTGCGCACCGAGTTGCAGGCCGACTGCTACGCGGGTGTGTGGGCACACTATG
CGGCGGTCACCACACAGGAGAGCACCGGCGTCCCGTTCCTGGAACCGTTGACCGACAAGGACATCGCCGACGCGCTGTCG
GCCGCATCGGCGGTCGGTGACGACCGGATCCAGGAGGCCGCGACCGGCCGGGTCAATCCCGAATCGTGGACCCACGGATC
GTCGGAGCAGCGGCAGAAGTGGTTCACCGTCGGCTACCAGACCGGCGATCCGACGAAGTGCGACACGTTCGCCACGAACG
ATCTTGGTTAG

Upstream 100 bases:

>100_bases
TTTGAACTTCGGCGACGGCGGACACACCCGAATCGTAGTGTGGGAGGGTGAACACCGGCGCTGGGTCGGAGCGCCTCCCC
GAGCGCGGACGGAGTGTGCG

Downstream 100 bases:

>100_bases
GCCACACACGGCGGTCGATGCCGTCGCCGAACGCTACCTCGACACCCTCGCCGCGCTGGATCCCTGTACCGCAACCGAAC
TCGGCATCGCCGGCGGCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MTFNEGMQIDTSTTSSSGGGRGGGRGIAVGGGIGGLLIVVVALFLGVDPGTVLPEQQQIGTEGVQAPGFDLSQCKTGADA
NEFVQCRVVATGNSLDAVWSQLKPDYTRPQVEIFSGSVDTRCGPATSAVGPFYCPADQTAYFDTDFFDVLRDQFGSSGGP
FAQEYVVAHEFGHHVQQLQGSLARAQEDPEGPTGGGVRTELQADCYAGVWAHYAAVTTQESTGVPFLEPLTDKDIADALS
AASAVGDDRIQEAATGRVNPESWTHGSSEQRQKWFTVGYQTGDPTKCDTFATNDLG

Sequences:

>Translated_296_residues
MTFNEGMQIDTSTTSSSGGGRGGGRGIAVGGGIGGLLIVVVALFLGVDPGTVLPEQQQIGTEGVQAPGFDLSQCKTGADA
NEFVQCRVVATGNSLDAVWSQLKPDYTRPQVEIFSGSVDTRCGPATSAVGPFYCPADQTAYFDTDFFDVLRDQFGSSGGP
FAQEYVVAHEFGHHVQQLQGSLARAQEDPEGPTGGGVRTELQADCYAGVWAHYAAVTTQESTGVPFLEPLTDKDIADALS
AASAVGDDRIQEAATGRVNPESWTHGSSEQRQKWFTVGYQTGDPTKCDTFATNDLG
>Mature_295_residues
TFNEGMQIDTSTTSSSGGGRGGGRGIAVGGGIGGLLIVVVALFLGVDPGTVLPEQQQIGTEGVQAPGFDLSQCKTGADAN
EFVQCRVVATGNSLDAVWSQLKPDYTRPQVEIFSGSVDTRCGPATSAVGPFYCPADQTAYFDTDFFDVLRDQFGSSGGPF
AQEYVVAHEFGHHVQQLQGSLARAQEDPEGPTGGGVRTELQADCYAGVWAHYAAVTTQESTGVPFLEPLTDKDIADALSA
ASAVGDDRIQEAATGRVNPESWTHGSSEQRQKWFTVGYQTGDPTKCDTFATNDLG

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=268, Percent_Identity=38.8059701492537, Blast_Score=186, Evalue=1e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 31103; Mature: 30972

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFNEGMQIDTSTTSSSGGGRGGGRGIAVGGGIGGLLIVVVALFLGVDPGTVLPEQQQIG
CCCCCCCEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHC
TEGVQAPGFDLSQCKTGADANEFVQCRVVATGNSLDAVWSQLKPDYTRPQVEIFSGSVDT
CCCCCCCCCCHHHHCCCCCCCCEEEEEEEEECCCHHHHHHHHCCCCCCCEEEEECCCCCC
RCGPATSAVGPFYCPADQTAYFDTDFFDVLRDQFGSSGGPFAQEYVVAHEFGHHVQQLQG
CCCCCCCCCCCEECCCCCCEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
SLARAQEDPEGPTGGGVRTELQADCYAGVWAHYAAVTTQESTGVPFLEPLTDKDIADALS
HHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHH
AASAVGDDRIQEAATGRVNPESWTHGSSEQRQKWFTVGYQTGDPTKCDTFATNDLG
HHHHHCHHHHHHHHCCCCCCCCCCCCCHHHHHEEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TFNEGMQIDTSTTSSSGGGRGGGRGIAVGGGIGGLLIVVVALFLGVDPGTVLPEQQQIG
CCCCCCEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHC
TEGVQAPGFDLSQCKTGADANEFVQCRVVATGNSLDAVWSQLKPDYTRPQVEIFSGSVDT
CCCCCCCCCCHHHHCCCCCCCCEEEEEEEEECCCHHHHHHHHCCCCCCCEEEEECCCCCC
RCGPATSAVGPFYCPADQTAYFDTDFFDVLRDQFGSSGGPFAQEYVVAHEFGHHVQQLQG
CCCCCCCCCCCEECCCCCCEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
SLARAQEDPEGPTGGGVRTELQADCYAGVWAHYAAVTTQESTGVPFLEPLTDKDIADALS
HHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHH
AASAVGDDRIQEAATGRVNPESWTHGSSEQRQKWFTVGYQTGDPTKCDTFATNDLG
HHHHHCHHHHHHHHCCCCCCCCCCCCCHHHHHEEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]