| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119868301
Identifier: 119868301
GI number: 119868301
Start: 2378971
End: 2379744
Strand: Reverse
Name: 119868301
Synonym: Mkms_2265
Alternate gene names: NA
Gene position: 2379744-2378971 (Counterclockwise)
Preceding gene: 119868303
Following gene: 119868300
Centisome position: 41.48
GC content: 73.9
Gene sequence:
>774_bases ATGCCCGACTCCGCGGCTGGGACGCAGTTCACAGTGCTGGGAGCGGTCGAATCGGTCGCCGACGACCGGGTCGGCGACTT CTACGCCTACCCCGACGCGCTGCGGCGCTGCTGGGTGCGCGGCAACATGATCGCCAGCGTGGACGGCGGCGCCACCGTCG CAGGCAGGTCCGGCGGCCTCGGCGCGGCCGGCGACCGGGCGCTGTTCGCGAAGATGCGCCAAGCCGCCGACGTGATCGTC GTCGGGGCCTCGACGGTGCGCACGGAGGACTACTCCGGGGCCCAGTTGTCGGCCGCCGCGCGACAGGACCGCGCGGCCCG CGGCCAGAGCGAGGTCCCACCCATCGCCGTGCTCACCCGGTCGGCGGATCTCGACCACGACGCCAAACTGTTCCGCCGCA CCGAGGTTCCGCCGATCCTGCTCACCAGCGCGCGCACGGCCGCCACGGCACGCGAACGCTTCGGCGGCCTCGCCGACGTC GTGGACGCCTCCGGACCCGAACCCGATGACGTCGACCCGGCCACTGCGCTCGACCTCCTCGCGGCGCGCGGGTTGCTGCG GGTGCTCACCGAGGGCGGTCCCGGGGTGCTCGGCCTGTTCACCGCCGCCGACCTGCTCGACGAGCTGTGCGTCACGGTCG CGCCCGTGCTCGTCGGCGGCGAGGCGCAGCGCATCGTCACCGGGCCTGGTCAGGTCCGGACACCGCTGCGCCGCAGCCAC ATCCTCGGCGACGACGACGGCTATCTGTACTGCCGGTACGTCCGGGACCGGTGA
Upstream 100 bases:
>100_bases GGTGACGCTGGGATTCCGGTCGACGAGATGGTCCGGTCGATTCGGCGCACCACTGGACCCAGGCATGCAGGCAGCGTAGC GACGTGCTGCAATCGTTCCT
Downstream 100 bases:
>100_bases CCACCTCGCTACTGTGGTCAGCATGCGTCGGCACCCCCAGCTGCTCCGGGTCGTGAGCCTGTCGACGGTCGCGCTGGTGC TGGCCGGCTGCGCGCCGGGG
Product: hypothetical protein
Products: 5-amino-6-(5-phosphoribosylamino)uracil; NADPH; H+
Alternate protein names: Bifunctional Deaminase-Reductase Domain-Containing Protein; 5-Amino-6-(5-Phosphoribosylamino)Uracil Reductase; Diaminohydroxyphosphoribosylaminopyrimidine Reductase; Deaminase-Reductase Domain-Containing Protein; Pyrimidine Reductase Riboflavin Biosynthesis; Bifunctional Riboflavin Biosynthesis Protein RibD; Pyrimidine Reductase-Like Protein; Bifunctional Riboflavin Biosynthesis Protein RibD; RibD Domain-Containing Protein; Hydrolase; Pyrimidine Reductase Riboflavin Biosynthesis-Like Protein; 5-Amino-6-(5-Phosphoribosylamino)Uracil Reductase Ribd
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MPDSAAGTQFTVLGAVESVADDRVGDFYAYPDALRRCWVRGNMIASVDGGATVAGRSGGLGAAGDRALFAKMRQAADVIV VGASTVRTEDYSGAQLSAAARQDRAARGQSEVPPIAVLTRSADLDHDAKLFRRTEVPPILLTSARTAATARERFGGLADV VDASGPEPDDVDPATALDLLAARGLLRVLTEGGPGVLGLFTAADLLDELCVTVAPVLVGGEAQRIVTGPGQVRTPLRRSH ILGDDDGYLYCRYVRDR
Sequences:
>Translated_257_residues MPDSAAGTQFTVLGAVESVADDRVGDFYAYPDALRRCWVRGNMIASVDGGATVAGRSGGLGAAGDRALFAKMRQAADVIV VGASTVRTEDYSGAQLSAAARQDRAARGQSEVPPIAVLTRSADLDHDAKLFRRTEVPPILLTSARTAATARERFGGLADV VDASGPEPDDVDPATALDLLAARGLLRVLTEGGPGVLGLFTAADLLDELCVTVAPVLVGGEAQRIVTGPGQVRTPLRRSH ILGDDDGYLYCRYVRDR >Mature_256_residues PDSAAGTQFTVLGAVESVADDRVGDFYAYPDALRRCWVRGNMIASVDGGATVAGRSGGLGAAGDRALFAKMRQAADVIVV GASTVRTEDYSGAQLSAAARQDRAARGQSEVPPIAVLTRSADLDHDAKLFRRTEVPPILLTSARTAATARERFGGLADVV DASGPEPDDVDPATALDLLAARGLLRVLTEGGPGVLGLFTAADLLDELCVTVAPVLVGGEAQRIVTGPGQVRTPLRRSHI LGDDDGYLYCRYVRDR
Specific function: Unknown
COG id: COG1985
COG function: function code H; Pyrimidine reductase, riboflavin biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.1.1.193
Molecular weight: Translated: 26905; Mature: 26773
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDSAAGTQFTVLGAVESVADDRVGDFYAYPDALRRCWVRGNMIASVDGGATVAGRSGGL CCCCCCCCEEEEHHHHHHHHHCCCCCHHCCHHHHHHHHHCCCEEEECCCCEEECCCCCCC GAAGDRALFAKMRQAADVIVVGASTVRTEDYSGAQLSAAARQDRAARGQSEVPPIAVLTR CCCCHHHHHHHHHHHCCEEEECCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEE SADLDHDAKLFRRTEVPPILLTSARTAATARERFGGLADVVDASGPEPDDVDPATALDLL CCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHH AARGLLRVLTEGGPGVLGLFTAADLLDELCVTVAPVLVGGEAQRIVTGPGQVRTPLRRSH HHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHCCCHHHHC ILGDDDGYLYCRYVRDR CCCCCCCEEEEEEECCC >Mature Secondary Structure PDSAAGTQFTVLGAVESVADDRVGDFYAYPDALRRCWVRGNMIASVDGGATVAGRSGGL CCCCCCCEEEEHHHHHHHHHCCCCCHHCCHHHHHHHHHCCCEEEECCCCEEECCCCCCC GAAGDRALFAKMRQAADVIVVGASTVRTEDYSGAQLSAAARQDRAARGQSEVPPIAVLTR CCCCHHHHHHHHHHHCCEEEECCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEE SADLDHDAKLFRRTEVPPILLTSARTAATARERFGGLADVVDASGPEPDDVDPATALDLL CCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHH AARGLLRVLTEGGPGVLGLFTAADLLDELCVTVAPVLVGGEAQRIVTGPGQVRTPLRRSH HHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHCCCHHHHC ILGDDDGYLYCRYVRDR CCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 5-amino-6-(5-phosphoribitylamino)uracil; NADP+
Specific reaction: 5-amino-6-(5-phosphoribitylamino)uracil + NADP+ = 5-amino-6-(5-phosphoribosylamino)uracil + NADPH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA