| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
Click here to switch to the map view.
The map label for this gene is yxxB [H]
Identifier: 119868066
GI number: 119868066
Start: 2151798
End: 2152652
Strand: Reverse
Name: yxxB [H]
Synonym: Mkms_2029
Alternate gene names: 119868066
Gene position: 2152652-2151798 (Counterclockwise)
Preceding gene: 119868067
Following gene: 119868065
Centisome position: 37.52
GC content: 69.71
Gene sequence:
>855_bases ATGAGCACCAGACCCGGTTACGGCGGAGGCACGGGCGGGGGCAGCGCCGGTGTCAATGGCGCGGTCAACAAGGCGACCAA CAGCGACGCCTTCGAGTACACCGCCCGGGCCGGGTTCGCCGCGAGCGGTGTGCTCCACCTGCTGGTCGGCTACATCATCC TGCAGATCGCCCTCGGCAGCGGCGGCAACGCCGACCAGTCCGGGGCGCTGGCGACGCTGGCCGGCCAGACCGGCGGCAAG ATCGTGTTGTGGATCGCCACCATCGGATTGATCGCCCTGGGCCTGTGGCGGTTGGCCGAGGCGTTCATCGGCGCCAAGCC CGGCGAGCAGTACGGACAAGCCCAGGGCGACAACCCCGCCTGGAAACGCGCCAAGTCCGTGGGGCTGGCGATCGCCAACT TCGCCATCGCCTTCTCCGCGCTGCAGTTCGCCACCGGCGGCGGTCAATCCAGCGGCCAGCAGAACTCCGGGATCTCGGCC CAACTGATGCAACACGGCTGGGGTAAGGCGCTGTTGATCCTCGTCGGCCTCGGCGTCATCGCGGTCGGCGGCTACCACGT CTACAAGGGCGCCACCAAGAAGTTCCTCAAGGACCTCCGGGTCACCGGCGGCACCGGCATCAACGCGGTCGGCGTCGCCG GCTACGTGGCCAAGGGCCTGGTACTCGCCGGGGCGGGCATCCTCGTCATCGTCGCGACCCTGCAGGCCGACCCCGCGAAG GCCTCCGGTCTCGACGCGGCTGTCAAGACGCTCGGGCAGGCGCCGTTCGGCAAGTTCCTGCTCATCGTCGCCGCGGTCGG CATCGCCGCGTTCGGCGCCTACAGCTTCGTGCGCAGCCGCTACGGCCGCCTGTAA
Upstream 100 bases:
>100_bases AGAGCACAGCATGCGTTTCACGCCCGTCAAAAAGGGGGACCCGTAGCCAGCCATCCGGCCACCCAATCGCGGCTGCACCG ACGCAGGAGGTTTCACGAGC
Downstream 100 bases:
>100_bases CCGCCCGAACCACCGAACCGTCGCCGCAGCCTCGCTGCGGCGGCGGCTCGCTTTTCGGCTCCATCGCCCGGCAAATGCGC CGGCGACCGCACAACCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MSTRPGYGGGTGGGSAGVNGAVNKATNSDAFEYTARAGFAASGVLHLLVGYIILQIALGSGGNADQSGALATLAGQTGGK IVLWIATIGLIALGLWRLAEAFIGAKPGEQYGQAQGDNPAWKRAKSVGLAIANFAIAFSALQFATGGGQSSGQQNSGISA QLMQHGWGKALLILVGLGVIAVGGYHVYKGATKKFLKDLRVTGGTGINAVGVAGYVAKGLVLAGAGILVIVATLQADPAK ASGLDAAVKTLGQAPFGKFLLIVAAVGIAAFGAYSFVRSRYGRL
Sequences:
>Translated_284_residues MSTRPGYGGGTGGGSAGVNGAVNKATNSDAFEYTARAGFAASGVLHLLVGYIILQIALGSGGNADQSGALATLAGQTGGK IVLWIATIGLIALGLWRLAEAFIGAKPGEQYGQAQGDNPAWKRAKSVGLAIANFAIAFSALQFATGGGQSSGQQNSGISA QLMQHGWGKALLILVGLGVIAVGGYHVYKGATKKFLKDLRVTGGTGINAVGVAGYVAKGLVLAGAGILVIVATLQADPAK ASGLDAAVKTLGQAPFGKFLLIVAAVGIAAFGAYSFVRSRYGRL >Mature_283_residues STRPGYGGGTGGGSAGVNGAVNKATNSDAFEYTARAGFAASGVLHLLVGYIILQIALGSGGNADQSGALATLAGQTGGKI VLWIATIGLIALGLWRLAEAFIGAKPGEQYGQAQGDNPAWKRAKSVGLAIANFAIAFSALQFATGGGQSSGQQNSGISAQ LMQHGWGKALLILVGLGVIAVGGYHVYKGATKKFLKDLRVTGGTGINAVGVAGYVAKGLVLAGAGILVIVATLQADPAKA SGLDAAVKTLGQAPFGKFLLIVAAVGIAAFGAYSFVRSRYGRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009597 [H]
Pfam domain/function: PF06724 DUF1206 [H]
EC number: NA
Molecular weight: Translated: 28351; Mature: 28220
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRPGYGGGTGGGSAGVNGAVNKATNSDAFEYTARAGFAASGVLHLLVGYIILQIALGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC GGNADQSGALATLAGQTGGKIVLWIATIGLIALGLWRLAEAFIGAKPGEQYGQAQGDNPA CCCCCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHH WKRAKSVGLAIANFAIAFSALQFATGGGQSSGQQNSGISAQLMQHGWGKALLILVGLGVI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHH AVGGYHVYKGATKKFLKDLRVTGGTGINAVGVAGYVAKGLVLAGAGILVIVATLQADPAK HHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHEEEEHHCCCCCC ASGLDAAVKTLGQAPFGKFLLIVAAVGIAAFGAYSFVRSRYGRL CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure STRPGYGGGTGGGSAGVNGAVNKATNSDAFEYTARAGFAASGVLHLLVGYIILQIALGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC GGNADQSGALATLAGQTGGKIVLWIATIGLIALGLWRLAEAFIGAKPGEQYGQAQGDNPA CCCCCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHH WKRAKSVGLAIANFAIAFSALQFATGGGQSSGQQNSGISAQLMQHGWGKALLILVGLGVI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHH AVGGYHVYKGATKKFLKDLRVTGGTGINAVGVAGYVAKGLVLAGAGILVIVATLQADPAK HHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHEEEEHHCCCCCC ASGLDAAVKTLGQAPFGKFLLIVAAVGIAAFGAYSFVRSRYGRL CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8867804; 9384377; 8550462 [H]