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The map label for this gene is yvaP [H]

Identifier: 119867889

GI number: 119867889

Start: 1965242

End: 1965913

Strand: Reverse

Name: yvaP [H]

Synonym: Mkms_1850

Alternate gene names: 119867889

Gene position: 1965913-1965242 (Counterclockwise)

Preceding gene: 119867892

Following gene: 119867887

Centisome position: 34.27

GC content: 68.6

Gene sequence:

>672_bases
ATGTCGGGTTACGGCCAGTTCTGCCCCGTGGCCAAGGCCATGGAAGTGCTCGACGAACGCTGGACGCTGCTGGTGGTCCG
CGAATTGTTGCTCGGTAGTACACATTTCAACGAACTGCGCCGTGGTGTGCCGAAGATGTCCCCGGCGCTGCTGTCGAAGC
GGCTCAAGTCGCTGATCCGGGCCGGTGTCGTCGAGCGCAGCGAAATCGACGGTCGCACAACATATTCGCTCACTCCCTGC
GGCAAGGAACTGACCGCGGTGGTGGACGCGCTGGGCGCCTGGGGGGTGCGCTGGATCGGCGAACTGGGCGAAGCCGACCT
CGACCCGCACCTGCTGATGTGGGACATGCGCAGGTCGATCCCATTGACCGAATGGCCGGACGGCCGCACCACGCTGGCGT
TCCGCCTCGACGGAGTGGAGGCGCGCGCGTCGCGCTGGTGGCTGGTGGTCGCCGACGGGCGGGCGGACGTCTGCGATTTC
GACCCCGGCTACGAGGTGACGGCGACAGTGTCGGCAGGCCTGCGCACGCTGACCGCGATCTGGCGCGGCGACATCAGTTG
GCAGCGTGCTCTGCTCGACGGTGGCGTGTCGGTGTCGGGCCCGGCAGAGGTCCGCCGCGCGGTGCCGGGCTGGATCGGTC
AGGGTTCGCTGGCGGCGGTACCGCGGCCCTGA

Upstream 100 bases:

>100_bases
ACAATCGTCACGCCCCGCCCGCGGCGATTCCAGTTCCATATCTGTACTGACGGCGCGTTGTGCGCGACGATGGTTGTGCG
GTCGTCGAGGAGGTGTGCCG

Downstream 100 bases:

>100_bases
CACGACTTCGGCGTGCGCGGTCGCGGTGAGCGCGACCACGCACGCCGAAGTCGCCGACTACTTGGGGGCGAACCGCTGCC
CGGCGTCGAGCCGGATGCAC

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MSGYGQFCPVAKAMEVLDERWTLLVVRELLLGSTHFNELRRGVPKMSPALLSKRLKSLIRAGVVERSEIDGRTTYSLTPC
GKELTAVVDALGAWGVRWIGELGEADLDPHLLMWDMRRSIPLTEWPDGRTTLAFRLDGVEARASRWWLVVADGRADVCDF
DPGYEVTATVSAGLRTLTAIWRGDISWQRALLDGGVSVSGPAEVRRAVPGWIGQGSLAAVPRP

Sequences:

>Translated_223_residues
MSGYGQFCPVAKAMEVLDERWTLLVVRELLLGSTHFNELRRGVPKMSPALLSKRLKSLIRAGVVERSEIDGRTTYSLTPC
GKELTAVVDALGAWGVRWIGELGEADLDPHLLMWDMRRSIPLTEWPDGRTTLAFRLDGVEARASRWWLVVADGRADVCDF
DPGYEVTATVSAGLRTLTAIWRGDISWQRALLDGGVSVSGPAEVRRAVPGWIGQGSLAAVPRP
>Mature_222_residues
SGYGQFCPVAKAMEVLDERWTLLVVRELLLGSTHFNELRRGVPKMSPALLSKRLKSLIRAGVVERSEIDGRTTYSLTPCG
KELTAVVDALGAWGVRWIGELGEADLDPHLLMWDMRRSIPLTEWPDGRTTLAFRLDGVEARASRWWLVVADGRADVCDFD
PGYEVTATVSAGLRTLTAIWRGDISWQRALLDGGVSVSGPAEVRRAVPGWIGQGSLAAVPRP

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 24496; Mature: 24365

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGYGQFCPVAKAMEVLDERWTLLVVRELLLGSTHFNELRRGVPKMSPALLSKRLKSLIR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHH
AGVVERSEIDGRTTYSLTPCGKELTAVVDALGAWGVRWIGELGEADLDPHLLMWDMRRSI
HCCCCHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHCC
PLTEWPDGRTTLAFRLDGVEARASRWWLVVADGRADVCDFDPGYEVTATVSAGLRTLTAI
CCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHH
WRGDISWQRALLDGGVSVSGPAEVRRAVPGWIGQGSLAAVPRP
HHCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCEECCCCC
>Mature Secondary Structure 
SGYGQFCPVAKAMEVLDERWTLLVVRELLLGSTHFNELRRGVPKMSPALLSKRLKSLIR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHH
AGVVERSEIDGRTTYSLTPCGKELTAVVDALGAWGVRWIGELGEADLDPHLLMWDMRRSI
HCCCCHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHCC
PLTEWPDGRTTLAFRLDGVEARASRWWLVVADGRADVCDFDPGYEVTATVSAGLRTLTAI
CCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHH
WRGDISWQRALLDGGVSVSGPAEVRRAVPGWIGQGSLAAVPRP
HHCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]