| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119867816
Identifier: 119867816
GI number: 119867816
Start: 1886373
End: 1887896
Strand: Reverse
Name: 119867816
Synonym: Mkms_1777
Alternate gene names: NA
Gene position: 1887896-1886373 (Counterclockwise)
Preceding gene: 119867818
Following gene: 119867813
Centisome position: 32.91
GC content: 67.39
Gene sequence:
>1524_bases ATGTATGTTCGAGGTATGTCAGGGCACGACCTCCAGGCCGCGGTGACCGCGCTGCGTGCGGCCTTCGACGAGGTGGCCTC CTGTGATGTCGCCTTGTTGGACCGCTCCGAACTCGTTGCGGCGCTGGATGAACTCGAGATCCTGGGATGCCGGTTGCCCA CGATGAGCCACCGCTTGCTGGCCCGTCTGCAATCCGAGGCGACACCGCAGCAGATGGGCGCCAAATCGTGGAGAGAGGTG CTGACGGTCCGCTGGCGGATCTCGGGCAGTGAGGCCAACCGACGACTCACCGAGGCCGGTCTGCTGGCGCCGCGCCAGGC ATTGACCGGTGCTTCGCTGCCGCCGGTGTTACCCGCAACGGCGGCAGCACAGGCGCACGGGTTGATCAACAGCGAACACG TCCAAGTCATCCGCAGAGCGGTCGACAAGTTGCCGGGGTTCGTCGACACCGTCACGCGGGAGCAGTTCGAGGTCACCCTG GTCCGCACCGCGGTCGGTGTGGGCCCCAAGGAACTCAAGGACGCGGCCGACCTCACGCTGTTCCTGCTCGATCAAGACGG TCCCGAGCCCGATGACACCGAACGGGCCCGCAAGCGTGGCGTGTCGCGATCGAAACAACGCCCCGACGGGATGGTCGAGC TGTCCGGGCACCTGACGCCGGAAGCGTGGGCGGTGTGGGAGGTGATCTTCGCGAAGTACGCGGCGCCGGGCATGTGCAAT CCCGACGATCCCGAACCCTGCACCTCGGGGACCCCGTCGCAGGAGCAGATCGACAACGACCACCGCACCCTGGCCCAGCG TCAACACGATGCGATGGTCGTGATCGGGCGCATCGCCTTGATGAGTGGCGAACTCGGCCAACTGAACGGGCTGCCGGTCT CGATCATCATCCGCACCACGCTGGAGGATCTGGAGTCGCGGGCCGGGGTCGGCACCACCGGTGGCGGCACCGTCGTGCCG ATCGCCGATGTGATCCGGATGGCCGGCCACGCCAACCACTACCTGGCGGTGTTCGACGGAGCTACCGGATCTGCTCTTGA TCTGTTCCGCGCCAAGCGGACTGCCTCGGCTGCGCAACGCATCATGCTGATCGCGCGAGATGGCGGATGCACCAAACCGT GCTGCACTGTCGGCGCCTACGGCTGCCAGGTGCATCATGTGGATGCCGACTGGTCAGACGGCGGCAACACCAACGTCGAT GAACTCGGGCTCGCGTGCGGGGCCGACAACCGTAGCGTCGACAAAGACGGCGGCTGGTCCACCCGCATGAACGACCACTG CGAAGTCGAATGGATCCCGCCGCCACGGCTGGACACCGGCCAGGCCCGGTTGAACCACTACCACCGCCCCGAACGCCTTC TCCGGCCACCCGACGACCCGGAACCTCAGGGGCACCACAACACTGCCGCGTCAGCGGACTCCGACGACGGCGATGAGATC GGCGACATCCAGGCGTGCACCCCACCGCCGGCCGACGTCGACCGGCCCGGTGGACCCGCACCCCCCGAGGGCCGGGCGGC CTGA
Upstream 100 bases:
>100_bases CACCAAGACCACCAGAACCGTCACCGATGTCCTGATGCAGAACTGTCACCGATGTCCTGAGAGGTGACAGCTGAGTCGCA TCCGGTTTGTCGGTGGTCGA
Downstream 100 bases:
>100_bases CCGCCGCGGATCTCGAACACCGCACCCGAACCGACAACATCGAAGCGGGTGAGGATGTCCTGCCGTCTACGGGCGGCCGC CTGAACGCCGGGCCTCTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 507; Mature: 507
Protein sequence:
>507_residues MYVRGMSGHDLQAAVTALRAAFDEVASCDVALLDRSELVAALDELEILGCRLPTMSHRLLARLQSEATPQQMGAKSWREV LTVRWRISGSEANRRLTEAGLLAPRQALTGASLPPVLPATAAAQAHGLINSEHVQVIRRAVDKLPGFVDTVTREQFEVTL VRTAVGVGPKELKDAADLTLFLLDQDGPEPDDTERARKRGVSRSKQRPDGMVELSGHLTPEAWAVWEVIFAKYAAPGMCN PDDPEPCTSGTPSQEQIDNDHRTLAQRQHDAMVVIGRIALMSGELGQLNGLPVSIIIRTTLEDLESRAGVGTTGGGTVVP IADVIRMAGHANHYLAVFDGATGSALDLFRAKRTASAAQRIMLIARDGGCTKPCCTVGAYGCQVHHVDADWSDGGNTNVD ELGLACGADNRSVDKDGGWSTRMNDHCEVEWIPPPRLDTGQARLNHYHRPERLLRPPDDPEPQGHHNTAASADSDDGDEI GDIQACTPPPADVDRPGGPAPPEGRAA
Sequences:
>Translated_507_residues MYVRGMSGHDLQAAVTALRAAFDEVASCDVALLDRSELVAALDELEILGCRLPTMSHRLLARLQSEATPQQMGAKSWREV LTVRWRISGSEANRRLTEAGLLAPRQALTGASLPPVLPATAAAQAHGLINSEHVQVIRRAVDKLPGFVDTVTREQFEVTL VRTAVGVGPKELKDAADLTLFLLDQDGPEPDDTERARKRGVSRSKQRPDGMVELSGHLTPEAWAVWEVIFAKYAAPGMCN PDDPEPCTSGTPSQEQIDNDHRTLAQRQHDAMVVIGRIALMSGELGQLNGLPVSIIIRTTLEDLESRAGVGTTGGGTVVP IADVIRMAGHANHYLAVFDGATGSALDLFRAKRTASAAQRIMLIARDGGCTKPCCTVGAYGCQVHHVDADWSDGGNTNVD ELGLACGADNRSVDKDGGWSTRMNDHCEVEWIPPPRLDTGQARLNHYHRPERLLRPPDDPEPQGHHNTAASADSDDGDEI GDIQACTPPPADVDRPGGPAPPEGRAA >Mature_507_residues MYVRGMSGHDLQAAVTALRAAFDEVASCDVALLDRSELVAALDELEILGCRLPTMSHRLLARLQSEATPQQMGAKSWREV LTVRWRISGSEANRRLTEAGLLAPRQALTGASLPPVLPATAAAQAHGLINSEHVQVIRRAVDKLPGFVDTVTREQFEVTL VRTAVGVGPKELKDAADLTLFLLDQDGPEPDDTERARKRGVSRSKQRPDGMVELSGHLTPEAWAVWEVIFAKYAAPGMCN PDDPEPCTSGTPSQEQIDNDHRTLAQRQHDAMVVIGRIALMSGELGQLNGLPVSIIIRTTLEDLESRAGVGTTGGGTVVP IADVIRMAGHANHYLAVFDGATGSALDLFRAKRTASAAQRIMLIARDGGCTKPCCTVGAYGCQVHHVDADWSDGGNTNVD ELGLACGADNRSVDKDGGWSTRMNDHCEVEWIPPPRLDTGQARLNHYHRPERLLRPPDDPEPQGHHNTAASADSDDGDEI GDIQACTPPPADVDRPGGPAPPEGRAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Rv1128c/1148c/1588c/1702c/1945/3466 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003870 - InterPro: IPR003615 [H]
Pfam domain/function: PF02720 DUF222 [H]
EC number: NA
Molecular weight: Translated: 54390; Mature: 54390
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVRGMSGHDLQAAVTALRAAFDEVASCDVALLDRSELVAALDELEILGCRLPTMSHRLL CEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHH ARLQSEATPQQMGAKSWREVLTVRWRISGSEANRRLTEAGLLAPRQALTGASLPPVLPAT HHHHHCCCHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCHH AAAQAHGLINSEHVQVIRRAVDKLPGFVDTVTREQFEVTLVRTAVGVGPKELKDAADLTL HHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEHHHHCCCHHHHHHHCCEEE FLLDQDGPEPDDTERARKRGVSRSKQRPDGMVELSGHLTPEAWAVWEVIFAKYAAPGMCN EEEECCCCCCCHHHHHHHHCCCHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCC PDDPEPCTSGTPSQEQIDNDHRTLAQRQHDAMVVIGRIALMSGELGQLNGLPVSIIIRTT CCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCEEEEEHHHHHCCCCCCCCCCCEEEEEHHH LEDLESRAGVGTTGGGTVVPIADVIRMAGHANHYLAVFDGATGSALDLFRAKRTASAAQR HHHHHHHCCCCCCCCCCEECHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHE IMLIARDGGCTKPCCTVGAYGCQVHHVDADWSDGGNTNVDELGLACGADNRSVDKDGGWS EEEEECCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHEECCCCCCCCCCCCCC TRMNDHCEVEWIPPPRLDTGQARLNHYHRPERLLRPPDDPEPQGHHNTAASADSDDGDEI CCCCCCCEEEECCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC GDIQACTPPPADVDRPGGPAPPEGRAA CCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MYVRGMSGHDLQAAVTALRAAFDEVASCDVALLDRSELVAALDELEILGCRLPTMSHRLL CEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHH ARLQSEATPQQMGAKSWREVLTVRWRISGSEANRRLTEAGLLAPRQALTGASLPPVLPAT HHHHHCCCHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCHH AAAQAHGLINSEHVQVIRRAVDKLPGFVDTVTREQFEVTLVRTAVGVGPKELKDAADLTL HHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEHHHHCCCHHHHHHHCCEEE FLLDQDGPEPDDTERARKRGVSRSKQRPDGMVELSGHLTPEAWAVWEVIFAKYAAPGMCN EEEECCCCCCCHHHHHHHHCCCHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCC PDDPEPCTSGTPSQEQIDNDHRTLAQRQHDAMVVIGRIALMSGELGQLNGLPVSIIIRTT CCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCEEEEEHHHHHCCCCCCCCCCCEEEEEHHH LEDLESRAGVGTTGGGTVVPIADVIRMAGHANHYLAVFDGATGSALDLFRAKRTASAAQR HHHHHHHCCCCCCCCCCEECHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHE IMLIARDGGCTKPCCTVGAYGCQVHHVDADWSDGGNTNVDELGLACGADNRSVDKDGGWS EEEEECCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHEECCCCCCCCCCCCCC TRMNDHCEVEWIPPPRLDTGQARLNHYHRPERLLRPPDDPEPQGHHNTAASADSDDGDEI CCCCCCCEEEECCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC GDIQACTPPPADVDRPGGPAPPEGRAA CCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]