Click here to switch to the map view.

The map label for this gene is dapA [H]

Identifier: 119867764

GI number: 119867764

Start: 1839983

End: 1840960

Strand: Reverse

Name: dapA [H]

Synonym: Mkms_1724

Alternate gene names: 119867764

Gene position: 1840960-1839983 (Counterclockwise)

Preceding gene: 119867765

Following gene: 119867763

Centisome position: 32.09

GC content: 62.99

Gene sequence:

>978_bases
ATGACCACCACGACACCGCTGGGATCCGACGCCAGGGCGTGGGCCGCCGAGAACCTTCGAGGCTTCTATATGTGTCCTGT
CACGCCCCTTACCGACGAGTTCGAGCTGGACGAAGAGGGTCTGCGGCAGAATATCGACGCGTTTGTGGAGATGGGGTGCA
CCGGCCTCGTTGTCGGCGGGTTTTTCGCCGAGGGATGGAACATGACGCTGGCCGAATGGCAGCGTTACCACGAGGTAGTC
GCCGGTGCCACCGCCGGCCGCCTGCCCTTGTTCACGATCATTCTGGACCATTCGGCGTACCAGGCGATCGAAAAAATGCG
GTTCGTGGAGTCCCTGGGCTTCACCGGCGCCGAGATCATGAACCCATCGGTGCAGCTCAAGACCGACGACGACGTGGTCG
ACTACTTCGACTTCGTGGCGCCCGCCACCGGGCTGGCGCTTGTGCTCTACCGGACGCCGGTATCCGGTTTCGTGTATAGC
CACGACGCCGTCGCTCGGATCGCCGAGCACGCCAACGTCGTTGGGATCAAGAATGGCACTTTGAGTTGGACCGACAGCAT
CGCCTTACGCCACCGCTTCGGGGACCATCTTGTGATCAGCGAGCCGAATGAGCGCTATTGGGCTCATGATGCTGCGCTCT
TCGGGGGTCGGGTGCTTTACGGGGAGCTCTCCCTGATCCTCTACGGGAAACGGCGGCAGGAACTGCACCAATACACCGAC
CTTGCGTTTGCTGGTGAACTCGCGGGGGCGCTACCTGTGTCGGCGAAGGTGGACGCAATTCGCCAGGTGTACGAAGAGGT
GCTCATCGGCCGCATCGCGGCAACGGGTTCCTACGTCGCGGCCATGCCCTATCTGAAGGCGTGGTTCGAACTGTTGGGGC
TGCGTGCCGGCCCGGTGCGACCGCCCGTCAAGGCCCGGCTGTCTGCTCCGGAGCGGGAAGTCCTGCAGGAGAAACTGACG
GCCGCCGAGGCCATTTGA

Upstream 100 bases:

>100_bases
CTGGCGCACTCCGCAGCTTCGGATATTCAGCGAGGGAGGCGGTTCCGCCCAACCTCAAACCCTCAACAGCCAAACTATCG
CTGAAGGAATTGCAAAGAAC

Downstream 100 bases:

>100_bases
TGCGCGTCCTGATCCTGGGCGCTGGTGGGCTCGGATCTGTCTTGGGCGGATATTTGGCGAACATTGGCGTCGATGTCACC
CTGGTCGGCAGGCCGGCGCA

Product: dihydrodipicolinate synthetase

Products: NA

Alternate protein names: DHDPS [H]

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MTTTTPLGSDARAWAAENLRGFYMCPVTPLTDEFELDEEGLRQNIDAFVEMGCTGLVVGGFFAEGWNMTLAEWQRYHEVV
AGATAGRLPLFTIILDHSAYQAIEKMRFVESLGFTGAEIMNPSVQLKTDDDVVDYFDFVAPATGLALVLYRTPVSGFVYS
HDAVARIAEHANVVGIKNGTLSWTDSIALRHRFGDHLVISEPNERYWAHDAALFGGRVLYGELSLILYGKRRQELHQYTD
LAFAGELAGALPVSAKVDAIRQVYEEVLIGRIAATGSYVAAMPYLKAWFELLGLRAGPVRPPVKARLSAPEREVLQEKLT
AAEAI

Sequences:

>Translated_325_residues
MTTTTPLGSDARAWAAENLRGFYMCPVTPLTDEFELDEEGLRQNIDAFVEMGCTGLVVGGFFAEGWNMTLAEWQRYHEVV
AGATAGRLPLFTIILDHSAYQAIEKMRFVESLGFTGAEIMNPSVQLKTDDDVVDYFDFVAPATGLALVLYRTPVSGFVYS
HDAVARIAEHANVVGIKNGTLSWTDSIALRHRFGDHLVISEPNERYWAHDAALFGGRVLYGELSLILYGKRRQELHQYTD
LAFAGELAGALPVSAKVDAIRQVYEEVLIGRIAATGSYVAAMPYLKAWFELLGLRAGPVRPPVKARLSAPEREVLQEKLT
AAEAI
>Mature_324_residues
TTTTPLGSDARAWAAENLRGFYMCPVTPLTDEFELDEEGLRQNIDAFVEMGCTGLVVGGFFAEGWNMTLAEWQRYHEVVA
GATAGRLPLFTIILDHSAYQAIEKMRFVESLGFTGAEIMNPSVQLKTDDDVVDYFDFVAPATGLALVLYRTPVSGFVYSH
DAVARIAEHANVVGIKNGTLSWTDSIALRHRFGDHLVISEPNERYWAHDAALFGGRVLYGELSLILYGKRRQELHQYTDL
AFAGELAGALPVSAKVDAIRQVYEEVLIGRIAATGSYVAAMPYLKAWFELLGLRAGPVRPPVKARLSAPEREVLQEKLTA
AEAI

Specific function: Important in N-acetylneuraminate lyase reaction [C]

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005263
- InterPro:   IPR002220
- InterPro:   IPR020625
- InterPro:   IPR020624 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 35817; Mature: 35686

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTTPLGSDARAWAAENLRGFYMCPVTPLTDEFELDEEGLRQNIDAFVEMGCTGLVVGG
CCCCCCCCCCHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECC
FFAEGWNMTLAEWQRYHEVVAGATAGRLPLFTIILDHSAYQAIEKMRFVESLGFTGAEIM
CHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCHHHC
NPSVQLKTDDDVVDYFDFVAPATGLALVLYRTPVSGFVYSHDAVARIAEHANVVGIKNGT
CCCEEEECCCCHHHHHHHHCCHHHHEEEEEECCCCCEEECHHHHHHHHHHCCEEEECCCC
LSWTDSIALRHRFGDHLVISEPNERYWAHDAALFGGRVLYGELSLILYGKRRQELHQYTD
CCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCEEEEEEEEEEEECHHHHHHHHHHH
LAFAGELAGALPVSAKVDAIRQVYEEVLIGRIAATGSYVAAMPYLKAWFELLGLRAGPVR
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCC
PPVKARLSAPEREVLQEKLTAAEAI
CCHHHHCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTTTPLGSDARAWAAENLRGFYMCPVTPLTDEFELDEEGLRQNIDAFVEMGCTGLVVGG
CCCCCCCCCHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECC
FFAEGWNMTLAEWQRYHEVVAGATAGRLPLFTIILDHSAYQAIEKMRFVESLGFTGAEIM
CHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCHHHC
NPSVQLKTDDDVVDYFDFVAPATGLALVLYRTPVSGFVYSHDAVARIAEHANVVGIKNGT
CCCEEEECCCCHHHHHHHHCCHHHHEEEEEECCCCCEEECHHHHHHHHHHCCEEEECCCC
LSWTDSIALRHRFGDHLVISEPNERYWAHDAALFGGRVLYGELSLILYGKRRQELHQYTD
CCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCEEEEEEEEEEEECHHHHHHHHHHH
LAFAGELAGALPVSAKVDAIRQVYEEVLIGRIAATGSYVAAMPYLKAWFELLGLRAGPVR
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCC
PPVKARLSAPEREVLQEKLTAAEAI
CCHHHHCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA