| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119867663
Identifier: 119867663
GI number: 119867663
Start: 1733127
End: 1734290
Strand: Reverse
Name: 119867663
Synonym: Mkms_1618
Alternate gene names: NA
Gene position: 1734290-1733127 (Counterclockwise)
Preceding gene: 119867664
Following gene: 119867662
Centisome position: 30.23
GC content: 70.02
Gene sequence:
>1164_bases GTGACCGCCTCCTGCCTCGACGCACGTCTGAGCCGAGATTTCGTCACCCGCCTGGCCGAGCGCGCGTACGACGCCGAACA GCTGCGCTGTCTGCCCCAGGCCACGGTGGACGATCTGATCGCGTCGAAGATCACCGATCTGCTGGTGCCTGCCCGCTACG GCGGCCAGGAGGCGCCCTACCCCGAGATTCTGCGTCCCGTACGGGAGATGGCACACGGCTGTGCATCGAGCGCGTGGACC ATCGGCTTCTACATCCTGCACAACTGGATGCTCGCGCTGTTCGGCGAACAGGCCCAGGCCGAGGCGTTCGCCGACCGCCC GTTCCTCGCGCCGGCGCCGTTGGCGCCCACCGGACGGGGCCGCCCCGATGGCGATGGCGTGCGGTTGAGCGGCAGGTGGT CCTGGGCCACCGGCGTGATGCACGGCAACTGGATCATGGTGGGTGCGCTCTGCGGACCCGACGACGGCATCTACCCGGCG CTCGCCCTGCTGCCGATCGCCGACGTCACCGTCGAGGACGTCTGGCACACCGACGGCATGCGCGCCACCGGCTCCAACGA CGTCGTCATCACCGACGCATTCGTCCCCGACCATCGCCTCGTCCGGGTGACCGATATCTACGCGGGAACCGCTCCGGGCG CACGACTGCACGACGCACCCACCTATCGGTGGCCGATGGTGCCCGCCCTGGCGCTACTGGCCGCCATGCCCGCACTGGGC AGCGCCGAACGTGTCATCGAGATCTACGCCGAGCGCCTCGGCGAACGCGTGCTGGCCTACGAGGGCGTCAAACAGAAGGA CAAACCGCTCGCCCAGGCCCGGCTCGGCGAGGCCGAGGTGCGGTTGCGCGCGCTGAGGGGACTTCTCGACGACACCGTCG GCGGCATCGAGGCGCTGGTGCGCGACCGCGATGCGGTGCCGCTGACCGTGCGGGCGCAGGCCCGGCTGGCCGCGGCGCAC ATTGTGCACGAATCCCGCGCGGTGATCGGGATGCTGATGGAGGCCTCGGGTGCGAGCGCCCACTTCGTCGCGAATCCGCT GCAGCGCGCCAGACGTGACGTCGACGTGCTCGCGGGTCACGTCATCTTCGACTACGACACCAGCCGCGAACTGGCGGGGG CACTGGCGATCGGCGCACGGATCCCCCCGTTCGCGATGGTTTGA
Upstream 100 bases:
>100_bases CCTGAGGCGGGCCAGGCCTCCCGGCGCGACCGGTTCCTGGAGCTCATGCTGCGCCGCTGAGCCCGCATTCCATACCAAAA AGTACGGTAAGGTCCCGCCT
Downstream 100 bases:
>100_bases TCAGATATGCCTGGTTTACGCGACACCGTCACCCATACGTTCCAGAAGCGCATCGCCAACCCGGTGATGCGGAGGTTGCC GTTCCAGACCCTGTTGGAGA
Product: acyl-CoA dehydrogenase type 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MTASCLDARLSRDFVTRLAERAYDAEQLRCLPQATVDDLIASKITDLLVPARYGGQEAPYPEILRPVREMAHGCASSAWT IGFYILHNWMLALFGEQAQAEAFADRPFLAPAPLAPTGRGRPDGDGVRLSGRWSWATGVMHGNWIMVGALCGPDDGIYPA LALLPIADVTVEDVWHTDGMRATGSNDVVITDAFVPDHRLVRVTDIYAGTAPGARLHDAPTYRWPMVPALALLAAMPALG SAERVIEIYAERLGERVLAYEGVKQKDKPLAQARLGEAEVRLRALRGLLDDTVGGIEALVRDRDAVPLTVRAQARLAAAH IVHESRAVIGMLMEASGASAHFVANPLQRARRDVDVLAGHVIFDYDTSRELAGALAIGARIPPFAMV
Sequences:
>Translated_387_residues MTASCLDARLSRDFVTRLAERAYDAEQLRCLPQATVDDLIASKITDLLVPARYGGQEAPYPEILRPVREMAHGCASSAWT IGFYILHNWMLALFGEQAQAEAFADRPFLAPAPLAPTGRGRPDGDGVRLSGRWSWATGVMHGNWIMVGALCGPDDGIYPA LALLPIADVTVEDVWHTDGMRATGSNDVVITDAFVPDHRLVRVTDIYAGTAPGARLHDAPTYRWPMVPALALLAAMPALG SAERVIEIYAERLGERVLAYEGVKQKDKPLAQARLGEAEVRLRALRGLLDDTVGGIEALVRDRDAVPLTVRAQARLAAAH IVHESRAVIGMLMEASGASAHFVANPLQRARRDVDVLAGHVIFDYDTSRELAGALAIGARIPPFAMV >Mature_386_residues TASCLDARLSRDFVTRLAERAYDAEQLRCLPQATVDDLIASKITDLLVPARYGGQEAPYPEILRPVREMAHGCASSAWTI GFYILHNWMLALFGEQAQAEAFADRPFLAPAPLAPTGRGRPDGDGVRLSGRWSWATGVMHGNWIMVGALCGPDDGIYPAL ALLPIADVTVEDVWHTDGMRATGSNDVVITDAFVPDHRLVRVTDIYAGTAPGARLHDAPTYRWPMVPALALLAAMPALGS AERVIEIYAERLGERVLAYEGVKQKDKPLAQARLGEAEVRLRALRGLLDDTVGGIEALVRDRDAVPLTVRAQARLAAAHI VHESRAVIGMLMEASGASAHFVANPLQRARRDVDVLAGHVIFDYDTSRELAGALAIGARIPPFAMV
Specific function: Gives rise to a blue or pink color to bacterial colonies. May have an hydroxylase activity, resulting in the observed pigment production [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013107 - InterPro: IPR006092 - InterPro: IPR006091 - InterPro: IPR009075 - InterPro: IPR013786 - InterPro: IPR009100 [H]
Pfam domain/function: PF08028 Acyl-CoA_dh_2; PF02771 Acyl-CoA_dh_N [H]
EC number: NA
Molecular weight: Translated: 41877; Mature: 41745
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASCLDARLSRDFVTRLAERAYDAEQLRCLPQATVDDLIASKITDLLVPARYGGQEAPY CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCH PEILRPVREMAHGCASSAWTIGFYILHNWMLALFGEQAQAEAFADRPFLAPAPLAPTGRG HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCC RPDGDGVRLSGRWSWATGVMHGNWIMVGALCGPDDGIYPALALLPIADVTVEDVWHTDGM CCCCCCEEEECEEEHEECEEECCEEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHCCCCC RATGSNDVVITDAFVPDHRLVRVTDIYAGTAPGARLHDAPTYRWPMVPALALLAAMPALG EECCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC SAERVIEIYAERLGERVLAYEGVKQKDKPLAQARLGEAEVRLRALRGLLDDTVGGIEALV CHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH RDRDAVPLTVRAQARLAAAHIVHESRAVIGMLMEASGASAHFVANPLQRARRDVDVLAGH HCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCE VIFDYDTSRELAGALAIGARIPPFAMV EEEECCCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TASCLDARLSRDFVTRLAERAYDAEQLRCLPQATVDDLIASKITDLLVPARYGGQEAPY CCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCH PEILRPVREMAHGCASSAWTIGFYILHNWMLALFGEQAQAEAFADRPFLAPAPLAPTGRG HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCC RPDGDGVRLSGRWSWATGVMHGNWIMVGALCGPDDGIYPALALLPIADVTVEDVWHTDGM CCCCCCEEEECEEEHEECEEECCEEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHCCCCC RATGSNDVVITDAFVPDHRLVRVTDIYAGTAPGARLHDAPTYRWPMVPALALLAAMPALG EECCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC SAERVIEIYAERLGERVLAYEGVKQKDKPLAQARLGEAEVRLRALRGLLDDTVGGIEALV CHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH RDRDAVPLTVRAQARLAAAHIVHESRAVIGMLMEASGASAHFVANPLQRARRDVDVLAGH HCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCE VIFDYDTSRELAGALAIGARIPPFAMV EEEECCCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2230720 [H]