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The map label for this gene is ybbK [C]

Identifier: 119867637

GI number: 119867637

Start: 1708488

End: 1709243

Strand: Reverse

Name: ybbK [C]

Synonym: Mkms_1591

Alternate gene names: 119867637

Gene position: 1709243-1708488 (Counterclockwise)

Preceding gene: 119867638

Following gene: 119867636

Centisome position: 29.79

GC content: 65.48

Gene sequence:

>756_bases
ATGACGTGGCTGATTCCCGTGGCAGCAGCGGCGCTCGTCGTCGTCGTGGTGCTGTACCTGTCCCTGAAGGTCATACCCGA
ATACGAACGCGGCGTGGTGTTTCGCGCCGGCCGCCTCCGGCCGCTCTACGGTCCGGGCGTCAAGTTCCTGATCCCCGTGG
TGGACCGACTGATACGGGTCGACCAGCGGGTGGTCACCCTGACCATCCCGCCGCAGGAGGTGATCACCAAGGACAACGTG
CCCGCCCGGGTGAACGCCGTCGTCATGTTCCGGGTGACCGATCCGCTGAACGCGATCGTCGCGGTCGAGAACTACTCGGT
CGCGACGTCCCAGATCGCGCAGACCACACTGCGGTCGCTGCTCGGCCGGGCCGATCTCGACACCCTCTTGGCCCATCGTG
ACGACCTCAACCAGGATCTGCGGACCATCATCGAGAAGCAGACTTGCGACTGGGGCGTCGAGGTGTCGGTCGTGGAGATC
AAGGACGTCGAGATCCCCGAGTCGATGCAGCGTGCCATGGCGCGCGAAGCCGAGGCCGAACGCGAGCGGAGGGCCAAGGT
GATCAACGCCCACGGCGAACTACAGGCTTCCGACGAACTGCGCCAGGCCGCCGAGACGCTCTCGAAGAGCCCGGCATCGC
TGCAGTTGCGTTACCTGCAGACCCTGCTCGAGCTCGGCGCCGATCAGAACTCCACGGTGGTGTTCCCGCTACCGGTGGAC
ATCATCACCCCCTTCCTGCGGGGGCTCAAGTCATGA

Upstream 100 bases:

>100_bases
TGCCTCACCGCACCGCGCACGAGGAGTCCGTGGCCGCCGCGATCGACAAGTACTCCACACGATGGGGAGTCGGACCGTCG
AAGAAGGACAGTGGCGCCCG

Downstream 100 bases:

>100_bases
GCACAGCGGTGTGGCTGCTGATCGCGCTGCCGCTGGCCGGTGCCGTGGTCCTGCTGCTGGCCGGGCGACGGTCGGACCGG
TGGGGACACCTGCTGGGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MTWLIPVAAAALVVVVVLYLSLKVIPEYERGVVFRAGRLRPLYGPGVKFLIPVVDRLIRVDQRVVTLTIPPQEVITKDNV
PARVNAVVMFRVTDPLNAIVAVENYSVATSQIAQTTLRSLLGRADLDTLLAHRDDLNQDLRTIIEKQTCDWGVEVSVVEI
KDVEIPESMQRAMAREAEAERERRAKVINAHGELQASDELRQAAETLSKSPASLQLRYLQTLLELGADQNSTVVFPLPVD
IITPFLRGLKS

Sequences:

>Translated_251_residues
MTWLIPVAAAALVVVVVLYLSLKVIPEYERGVVFRAGRLRPLYGPGVKFLIPVVDRLIRVDQRVVTLTIPPQEVITKDNV
PARVNAVVMFRVTDPLNAIVAVENYSVATSQIAQTTLRSLLGRADLDTLLAHRDDLNQDLRTIIEKQTCDWGVEVSVVEI
KDVEIPESMQRAMAREAEAERERRAKVINAHGELQASDELRQAAETLSKSPASLQLRYLQTLLELGADQNSTVVFPLPVD
IITPFLRGLKS
>Mature_250_residues
TWLIPVAAAALVVVVVLYLSLKVIPEYERGVVFRAGRLRPLYGPGVKFLIPVVDRLIRVDQRVVTLTIPPQEVITKDNVP
ARVNAVVMFRVTDPLNAIVAVENYSVATSQIAQTTLRSLLGRADLDTLLAHRDDLNQDLRTIIEKQTCDWGVEVSVVEIK
DVEIPESMQRAMAREAEAERERRAKVINAHGELQASDELRQAAETLSKSPASLQLRYLQTLLELGADQNSTVVFPLPVDI
ITPFLRGLKS

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI221316744, Length=245, Percent_Identity=44.4897959183673, Blast_Score=199, Evalue=2e-51,
Organism=Homo sapiens, GI21686995, Length=245, Percent_Identity=44.4897959183673, Blast_Score=199, Evalue=2e-51,
Organism=Homo sapiens, GI38016911, Length=246, Percent_Identity=44.7154471544715, Blast_Score=198, Evalue=4e-51,
Organism=Homo sapiens, GI7657615, Length=246, Percent_Identity=37.3983739837398, Blast_Score=169, Evalue=2e-42,
Organism=Homo sapiens, GI7305503, Length=169, Percent_Identity=36.094674556213, Blast_Score=118, Evalue=7e-27,
Organism=Homo sapiens, GI20149563, Length=142, Percent_Identity=34.5070422535211, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI38016907, Length=57, Percent_Identity=56.140350877193, Blast_Score=73, Evalue=3e-13,
Organism=Escherichia coli, GI1786697, Length=186, Percent_Identity=33.8709677419355, Blast_Score=115, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17569493, Length=232, Percent_Identity=43.5344827586207, Blast_Score=205, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI193209764, Length=232, Percent_Identity=43.5344827586207, Blast_Score=204, Evalue=3e-53,
Organism=Caenorhabditis elegans, GI71987612, Length=250, Percent_Identity=44, Blast_Score=201, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI25153583, Length=250, Percent_Identity=44, Blast_Score=200, Evalue=5e-52,
Organism=Caenorhabditis elegans, GI71987621, Length=250, Percent_Identity=44, Blast_Score=200, Evalue=5e-52,
Organism=Caenorhabditis elegans, GI17570459, Length=250, Percent_Identity=40, Blast_Score=198, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI17569497, Length=239, Percent_Identity=41.4225941422594, Blast_Score=194, Evalue=4e-50,
Organism=Caenorhabditis elegans, GI17569499, Length=252, Percent_Identity=42.0634920634921, Blast_Score=190, Evalue=5e-49,
Organism=Caenorhabditis elegans, GI17570161, Length=249, Percent_Identity=43.3734939759036, Blast_Score=186, Evalue=8e-48,
Organism=Caenorhabditis elegans, GI193210507, Length=249, Percent_Identity=43.3734939759036, Blast_Score=186, Evalue=8e-48,
Organism=Caenorhabditis elegans, GI32566490, Length=224, Percent_Identity=45.5357142857143, Blast_Score=176, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI71989948, Length=235, Percent_Identity=39.5744680851064, Blast_Score=174, Evalue=4e-44,
Organism=Caenorhabditis elegans, GI71989955, Length=184, Percent_Identity=40.7608695652174, Blast_Score=130, Evalue=6e-31,
Organism=Caenorhabditis elegans, GI32564147, Length=175, Percent_Identity=36.5714285714286, Blast_Score=126, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI71989963, Length=120, Percent_Identity=40.8333333333333, Blast_Score=104, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI17542664, Length=174, Percent_Identity=27.5862068965517, Blast_Score=84, Evalue=9e-17,
Organism=Drosophila melanogaster, GI45556022, Length=237, Percent_Identity=50.210970464135, Blast_Score=218, Evalue=2e-57,
Organism=Drosophila melanogaster, GI18860517, Length=250, Percent_Identity=45.2, Blast_Score=213, Evalue=1e-55,
Organism=Drosophila melanogaster, GI62484448, Length=246, Percent_Identity=47.9674796747967, Blast_Score=201, Evalue=6e-52,
Organism=Drosophila melanogaster, GI281365664, Length=246, Percent_Identity=47.9674796747967, Blast_Score=200, Evalue=9e-52,
Organism=Drosophila melanogaster, GI62484274, Length=246, Percent_Identity=47.9674796747967, Blast_Score=200, Evalue=9e-52,
Organism=Drosophila melanogaster, GI24657857, Length=244, Percent_Identity=48.7704918032787, Blast_Score=199, Evalue=1e-51,
Organism=Drosophila melanogaster, GI21356845, Length=231, Percent_Identity=40.6926406926407, Blast_Score=191, Evalue=3e-49,
Organism=Drosophila melanogaster, GI281361631, Length=230, Percent_Identity=39.5652173913043, Blast_Score=186, Evalue=1e-47,
Organism=Drosophila melanogaster, GI281361633, Length=230, Percent_Identity=39.5652173913043, Blast_Score=186, Evalue=1e-47,
Organism=Drosophila melanogaster, GI28573263, Length=232, Percent_Identity=40.5172413793103, Blast_Score=177, Evalue=4e-45,
Organism=Drosophila melanogaster, GI281361635, Length=184, Percent_Identity=38.5869565217391, Blast_Score=145, Evalue=3e-35,
Organism=Drosophila melanogaster, GI45550506, Length=176, Percent_Identity=33.5227272727273, Blast_Score=117, Evalue=8e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 27910; Mature: 27779

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWLIPVAAAALVVVVVLYLSLKVIPEYERGVVFRAGRLRPLYGPGVKFLIPVVDRLIRV
CCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHH
DQRVVTLTIPPQEVITKDNVPARVNAVVMFRVTDPLNAIVAVENYSVATSQIAQTTLRSL
CCEEEEEEECHHHHHCCCCCCCEEEEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHH
LGRADLDTLLAHRDDLNQDLRTIIEKQTCDWGVEVSVVEIKDVEIPESMQRAMAREAEAE
HCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHH
RERRAKVINAHGELQASDELRQAAETLSKSPASLQLRYLQTLLELGADQNSTVVFPLPVD
HHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHH
IITPFLRGLKS
HHHHHHHHHCC
>Mature Secondary Structure 
TWLIPVAAAALVVVVVLYLSLKVIPEYERGVVFRAGRLRPLYGPGVKFLIPVVDRLIRV
CEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHH
DQRVVTLTIPPQEVITKDNVPARVNAVVMFRVTDPLNAIVAVENYSVATSQIAQTTLRSL
CCEEEEEEECHHHHHCCCCCCCEEEEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHH
LGRADLDTLLAHRDDLNQDLRTIIEKQTCDWGVEVSVVEIKDVEIPESMQRAMAREAEAE
HCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHH
RERRAKVINAHGELQASDELRQAAETLSKSPASLQLRYLQTLLELGADQNSTVVFPLPVD
HHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHH
IITPFLRGLKS
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]