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The map label for this gene is pobB [H]

Identifier: 119867591

GI number: 119867591

Start: 1660151

End: 1661152

Strand: Reverse

Name: pobB [H]

Synonym: Mkms_1543

Alternate gene names: 119867591

Gene position: 1661152-1660151 (Counterclockwise)

Preceding gene: 119867592

Following gene: 119867590

Centisome position: 28.95

GC content: 65.47

Gene sequence:

>1002_bases
ATGACCAACGTTGACTGCCGGGAACAGGCAAGCACCGTGCGTCTGGTCATGCGGGAGTACGAGGCCGACGTCGTCGTCGC
CGGCAAGGAAGTCATCGCCGACGGCATCGCCGCACTGACCTTGAAAGAGGTTGGGGGCCATCCGCTCCCGGAGTGGACAC
CCGGATCACACATCGACCTCATCATGTCCTCCGGCCTGGTACGCCAGTACTCGCTGTGCGGTGACCCCGCCGACCGGGGC
ACCTGGCGCATCGCAGTGCTCCGCGAACCCGATGAGCGTTCCCGCGGCGGCTCGGTCTACGTGCACGACAGCCTTGAACA
TGGCGCCGAGATCCGTATTCGCGGTCCTCGCAACCATTTCCAGCTCGCGCCGTCACCGAATTACCTGTTCATCGCCGGCG
GCATCGGTATCACGCCGATCCGGGCGATGCTGGCCGAGGCCGAGGCGGCGGGCGCGAACTGGAAGCTGTTCTACGGCGGC
CGCAGCACCGAATCCATGGCCTTCCTCGACGAACTGGCCCCATACGGTGACCGGGTCGAGTTCTGGCCGCAGGATCAGCG
TGGGCTGCTGGACCTGAAGTACATCCTGGGCGCCCCGCAGGCTGACACCTTGGTGTACTGCTGCGGCCCGCAGGGTCTGC
TCACCGCAGTCGAAGAACGCTGCACGTCCTGGCCTGCCGGCGCGCTGCGGCTGGAACGCTTCAGCTCCAGCACTGTCGAG
ACCGAGTGGGTCAACACCCCGATCGAGGTCGAACTGGCCCAGCAGGGTGTGACGTTGACCGTGCCCGCGGACCAGAGCGT
GCTCGAGGCGATCGTGGCGCACGGTGTCGACGTGATGTCCTCATGCCAGTCCGGCATGTGCGGAACCTGCGAAACACCGG
TTCTCAGTGGTGTTCCCGAACATCGGGACGACGTCCTGACCTACGAGGAGCGAGAGCGCAACGACTGCATGATGATCTGC
GTGTCGCGCAGCCGCGGCGACAAGCTCGTCCTCGACATCTGA

Upstream 100 bases:

>100_bases
TTCCGACACTCAAGGTGGCGGTCCCCTCCGACGAGATCCAGGTGAAGACCGAAGCCAAGATCTTCGGGCTGAAGTCGCTG
CCCGTCACGTGGTAGACCGC

Downstream 100 bases:

>100_bases
TCTGTCCCCACCGACGCCGGCAGACCCCTCCCCCGGGGCTGTCGGCGTCGCCCTTTCTGCACCTCGCCAAGTTGCGCGTC
TCACAGAATCAAGACTAACA

Product: ferredoxin

Products: NA

Alternate protein names: 4-carboxydiphenyl ether; phenoxybenzoate dioxygenase subunit beta [H]

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MTNVDCREQASTVRLVMREYEADVVVAGKEVIADGIAALTLKEVGGHPLPEWTPGSHIDLIMSSGLVRQYSLCGDPADRG
TWRIAVLREPDERSRGGSVYVHDSLEHGAEIRIRGPRNHFQLAPSPNYLFIAGGIGITPIRAMLAEAEAAGANWKLFYGG
RSTESMAFLDELAPYGDRVEFWPQDQRGLLDLKYILGAPQADTLVYCCGPQGLLTAVEERCTSWPAGALRLERFSSSTVE
TEWVNTPIEVELAQQGVTLTVPADQSVLEAIVAHGVDVMSSCQSGMCGTCETPVLSGVPEHRDDVLTYEERERNDCMMIC
VSRSRGDKLVLDI

Sequences:

>Translated_333_residues
MTNVDCREQASTVRLVMREYEADVVVAGKEVIADGIAALTLKEVGGHPLPEWTPGSHIDLIMSSGLVRQYSLCGDPADRG
TWRIAVLREPDERSRGGSVYVHDSLEHGAEIRIRGPRNHFQLAPSPNYLFIAGGIGITPIRAMLAEAEAAGANWKLFYGG
RSTESMAFLDELAPYGDRVEFWPQDQRGLLDLKYILGAPQADTLVYCCGPQGLLTAVEERCTSWPAGALRLERFSSSTVE
TEWVNTPIEVELAQQGVTLTVPADQSVLEAIVAHGVDVMSSCQSGMCGTCETPVLSGVPEHRDDVLTYEERERNDCMMIC
VSRSRGDKLVLDI
>Mature_332_residues
TNVDCREQASTVRLVMREYEADVVVAGKEVIADGIAALTLKEVGGHPLPEWTPGSHIDLIMSSGLVRQYSLCGDPADRGT
WRIAVLREPDERSRGGSVYVHDSLEHGAEIRIRGPRNHFQLAPSPNYLFIAGGIGITPIRAMLAEAEAAGANWKLFYGGR
STESMAFLDELAPYGDRVEFWPQDQRGLLDLKYILGAPQADTLVYCCGPQGLLTAVEERCTSWPAGALRLERFSSSTVET
EWVNTPIEVELAQQGVTLTVPADQSVLEAIVAHGVDVMSSCQSGMCGTCETPVLSGVPEHRDDVLTYEERERNDCMMICV
SRSRGDKLVLDI

Specific function: Degrades exclusively diarylether compounds having carboxyl groups in the 3- or 4-position. Yields a hemiacetal that spontaneously hydrolyzes to phenol and protocatechuate [H]

COG id: COG1018

COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI1788104, Length=327, Percent_Identity=36.085626911315, Blast_Score=190, Evalue=1e-49,
Organism=Escherichia coli, GI1787658, Length=306, Percent_Identity=26.4705882352941, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR000951
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36439; Mature: 36307

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNVDCREQASTVRLVMREYEADVVVAGKEVIADGIAALTLKEVGGHPLPEWTPGSHIDL
CCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHEEHHHHCCCCCCCCCCCCCEEE
IMSSGLVRQYSLCGDPADRGTWRIAVLREPDERSRGGSVYVHDSLEHGAEIRIRGPRNHF
EECCCCHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCEEEEECCCCCE
QLAPSPNYLFIAGGIGITPIRAMLAEAEAAGANWKLFYGGRSTESMAFLDELAPYGDRVE
EECCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCCEE
FWPQDQRGLLDLKYILGAPQADTLVYCCGPQGLLTAVEERCTSWPAGALRLERFSSSTVE
ECCCCCCCCEEEHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCEEHHHHCCCCCC
TEWVNTPIEVELAQQGVTLTVPADQSVLEAIVAHGVDVMSSCQSGMCGTCETPVLSGVPE
CEECCCCEEEEEECCCEEEEECCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHCCCCC
HRDDVLTYEERERNDCMMICVSRSRGDKLVLDI
CCCCCCCCHHCCCCCEEEEEEECCCCCEEEEEC
>Mature Secondary Structure 
TNVDCREQASTVRLVMREYEADVVVAGKEVIADGIAALTLKEVGGHPLPEWTPGSHIDL
CCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHEEHHHHCCCCCCCCCCCCCEEE
IMSSGLVRQYSLCGDPADRGTWRIAVLREPDERSRGGSVYVHDSLEHGAEIRIRGPRNHF
EECCCCHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCEEEEECCCCCE
QLAPSPNYLFIAGGIGITPIRAMLAEAEAAGANWKLFYGGRSTESMAFLDELAPYGDRVE
EECCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCCEE
FWPQDQRGLLDLKYILGAPQADTLVYCCGPQGLLTAVEERCTSWPAGALRLERFSSSTVE
ECCCCCCCCEEEHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCEEHHHHCCCCCC
TEWVNTPIEVELAQQGVTLTVPADQSVLEAIVAHGVDVMSSCQSGMCGTCETPVLSGVPE
CEECCCCEEEEEECCCEEEEECCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHCCCCC
HRDDVLTYEERERNDCMMICVSRSRGDKLVLDI
CCCCCCCCHHCCCCCEEEEEEECCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: FMN. [C]

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7710319 [H]