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The map label for this gene is aidB [C]

Identifier: 119867579

GI number: 119867579

Start: 1642975

End: 1644822

Strand: Direct

Name: aidB [C]

Synonym: Mkms_1531

Alternate gene names: 119867579

Gene position: 1642975-1644822 (Clockwise)

Preceding gene: 119867577

Following gene: 119867580

Centisome position: 28.64

GC content: 65.69

Gene sequence:

>1848_bases
ATGGGCCATTACCGAAGCAACCTGCGTGACGTCGAGTTCAACCTGTTCGAGCTACTCGAACGCGACCGCCTCTTCGGCGC
GCAACCGTACGGGGACATCGACCTCGACACCGCGAAGTTCATCCTCCGTGAGGTGGACCGGCTCGCGCGCGAGGATCTCG
CGGAATCGTTCGAAGAAGCTGATCGTCACCCTCCGGTCTACGATCCGTCGACCCGATCCGTCACGGTCACGCCCGAGTTC
GCCGGCGCATACAAGACATGGATGGACGCCGAGTGGTGGCGCCTGCGAGTACTCCCCGAACTGGGCGGTACCGACGCCCC
CAATTCGCTCAACTGGGCACTGGCGGAGTTCGTTCTCGGGGCGAATCCCGCGTTGTGGACATATGTCGGCATGCCGACCG
CCGCGCGGGTGGTCTGGCACCACGGCACCGAGCGGGACCGCAAGATCGCCCAGATCGGCGTCGAGAAGCGCTGGGGCGCA
ACCATGGTGCTGACCGAGCCGGACGCCGGTTCTGATGTCGGAGCGGGTCGCACCCGCGCCGTCCCCAACGACGACGGCAC
CTGGAACATCCACGGCGTCAAGCGGTTCATCACCGCAGGAGAGCACGACCTGGCGGACAACATCCTCCACCTCGTCCTGG
CCAGGCCCGTCGGTGTCGACGGCGTCGGCGGTCCCGGTACCAAGGGGCTCAGCCTCTTCCTCGTCCCGAAGTTCCACTTC
GATCCGGACACCGGCGAACTCACCGGTGAGCGAAACGGCGTGTACGCCACCAACGTCGAGAAGAAGATGGGCATGAACGT
GTCCACGACGTGCGAGTTGACGCTCGGCGACGACGCTCCGGCGCGAGGGTGGCTGCTGGGTGAGGTGCACGACGGGATCG
CGCAGATGTTCGAGGTCATCGAGGACGCGCGGATGATGGTCGGTTGCAAGGCGATCGCCACCTTGTCGAGCGGCTACCTC
AACGCCCTGGACTACGCCAAGCAGCGCGTGCAGGGGGCGGATCTCGCGCAGATGTCGGACAAGTCGGCGCCCCGCGTCAC
CATCACCCGCCACCCGGATGTCAGGCGTTCACTGCTCACGCAGAAGGCTTTCGCCGAGGGCATGCGGTCGTTGGTCCTCT
ACACCGCGTCGTGGCAGGACGAGATCGCGGTGAAGACGGCCGCGGGCGAGGACGCCGCGTTGGCCGAAGCCGTCAACGAT
CTGCTCCTGCCGATCGTGAAGGGTTACGGGTCGGAACGGTCGTGGGTGGTCCTGGGCACCGAATCGCTGCAGACCTTCGG
CGGATCGGGCTATCTGCGCGAGTATCCCATCGAGCAGTACGTTCGTGATGCCAAGATCGACACGGTGTATGAGGGGACGA
CCGCGATCCAGGCCCAGGACCTGTTCTTCCGCAAGATCGTTCGCAACAGGAGCGTGGCACTGACGCACCTGTTGGACGAG
GTCAAGGCCTTCGCCGCCGCATCCGACCCGGCGTCGCCGATCACCGGCGAACGTCGACTTCTGGGGGATGCGGTCTCGAA
CGTCGAGGCGATCGTCGCGAAGATGACCGGCGACCTCGCCGCCTCCAAGGATGAGTCCACCACCGTGTACCGGGTCGGTC
TCAACGCCACGCGGTTGCTCTTCGCCCTCGGCGACGTGTTCGTCGGATGGCTGCTGCTGAGGAGTGCTCACATCGCGCTG
ACCGCACTTGCTGAGCCGCAGGCGCCCTCAGACATCTCCTTCTACGAGGGGAAGGTGGCCGCCGCGCAGTTCTTCGCCCG
CGAGGTCCTCCCGAAGATCGCCGCCGAGCGCGAGATCGCGGAGACCGTCGGCGATTTCGTGATGGAGCTGGACGAAGCGG
CCTTCTGA

Upstream 100 bases:

>100_bases
TTATGGTTCACTGACTGCACTGGCGTGGGTCCAGGGGACCGTCCAGGCATCGTTTCCGGCCGCTGAAGACAGGTCGAACA
CACCGTGAGGGGCAGCCACC

Downstream 100 bases:

>100_bases
GGCACCGCTCCATGCCGGCGAGCAGACACAGAATCGCGTGAATCCTTACCGGATCACGCGATTCTGTGTCTGCTCGCGGA
GGCTGACGCGCCCTAGTTGT

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: Butyryl-CoA dehydrogenase; BCAD; SCAD [H]

Number of amino acids: Translated: 615; Mature: 614

Protein sequence:

>615_residues
MGHYRSNLRDVEFNLFELLERDRLFGAQPYGDIDLDTAKFILREVDRLAREDLAESFEEADRHPPVYDPSTRSVTVTPEF
AGAYKTWMDAEWWRLRVLPELGGTDAPNSLNWALAEFVLGANPALWTYVGMPTAARVVWHHGTERDRKIAQIGVEKRWGA
TMVLTEPDAGSDVGAGRTRAVPNDDGTWNIHGVKRFITAGEHDLADNILHLVLARPVGVDGVGGPGTKGLSLFLVPKFHF
DPDTGELTGERNGVYATNVEKKMGMNVSTTCELTLGDDAPARGWLLGEVHDGIAQMFEVIEDARMMVGCKAIATLSSGYL
NALDYAKQRVQGADLAQMSDKSAPRVTITRHPDVRRSLLTQKAFAEGMRSLVLYTASWQDEIAVKTAAGEDAALAEAVND
LLLPIVKGYGSERSWVVLGTESLQTFGGSGYLREYPIEQYVRDAKIDTVYEGTTAIQAQDLFFRKIVRNRSVALTHLLDE
VKAFAAASDPASPITGERRLLGDAVSNVEAIVAKMTGDLAASKDESTTVYRVGLNATRLLFALGDVFVGWLLLRSAHIAL
TALAEPQAPSDISFYEGKVAAAQFFAREVLPKIAAEREIAETVGDFVMELDEAAF

Sequences:

>Translated_615_residues
MGHYRSNLRDVEFNLFELLERDRLFGAQPYGDIDLDTAKFILREVDRLAREDLAESFEEADRHPPVYDPSTRSVTVTPEF
AGAYKTWMDAEWWRLRVLPELGGTDAPNSLNWALAEFVLGANPALWTYVGMPTAARVVWHHGTERDRKIAQIGVEKRWGA
TMVLTEPDAGSDVGAGRTRAVPNDDGTWNIHGVKRFITAGEHDLADNILHLVLARPVGVDGVGGPGTKGLSLFLVPKFHF
DPDTGELTGERNGVYATNVEKKMGMNVSTTCELTLGDDAPARGWLLGEVHDGIAQMFEVIEDARMMVGCKAIATLSSGYL
NALDYAKQRVQGADLAQMSDKSAPRVTITRHPDVRRSLLTQKAFAEGMRSLVLYTASWQDEIAVKTAAGEDAALAEAVND
LLLPIVKGYGSERSWVVLGTESLQTFGGSGYLREYPIEQYVRDAKIDTVYEGTTAIQAQDLFFRKIVRNRSVALTHLLDE
VKAFAAASDPASPITGERRLLGDAVSNVEAIVAKMTGDLAASKDESTTVYRVGLNATRLLFALGDVFVGWLLLRSAHIAL
TALAEPQAPSDISFYEGKVAAAQFFAREVLPKIAAEREIAETVGDFVMELDEAAF
>Mature_614_residues
GHYRSNLRDVEFNLFELLERDRLFGAQPYGDIDLDTAKFILREVDRLAREDLAESFEEADRHPPVYDPSTRSVTVTPEFA
GAYKTWMDAEWWRLRVLPELGGTDAPNSLNWALAEFVLGANPALWTYVGMPTAARVVWHHGTERDRKIAQIGVEKRWGAT
MVLTEPDAGSDVGAGRTRAVPNDDGTWNIHGVKRFITAGEHDLADNILHLVLARPVGVDGVGGPGTKGLSLFLVPKFHFD
PDTGELTGERNGVYATNVEKKMGMNVSTTCELTLGDDAPARGWLLGEVHDGIAQMFEVIEDARMMVGCKAIATLSSGYLN
ALDYAKQRVQGADLAQMSDKSAPRVTITRHPDVRRSLLTQKAFAEGMRSLVLYTASWQDEIAVKTAAGEDAALAEAVNDL
LLPIVKGYGSERSWVVLGTESLQTFGGSGYLREYPIEQYVRDAKIDTVYEGTTAIQAQDLFFRKIVRNRSVALTHLLDEV
KAFAAASDPASPITGERRLLGDAVSNVEAIVAKMTGDLAASKDESTTVYRVGLNATRLLFALGDVFVGWLLLRSAHIALT
ALAEPQAPSDISFYEGKVAAAQFFAREVLPKIAAEREIAETVGDFVMELDEAAF

Specific function: Has an optimum specificity for 4-carbon length fatty acyl-CoAs [H]

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI21361497, Length=298, Percent_Identity=28.5234899328859, Blast_Score=87, Evalue=6e-17,
Organism=Escherichia coli, GI87082384, Length=390, Percent_Identity=25.8974358974359, Blast_Score=87, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI86563381, Length=315, Percent_Identity=28.8888888888889, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI86563383, Length=315, Percent_Identity=28.8888888888889, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24646207, Length=438, Percent_Identity=24.2009132420091, Blast_Score=86, Evalue=7e-17,
Organism=Drosophila melanogaster, GI21356377, Length=301, Percent_Identity=25.5813953488372, Blast_Score=69, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.2 [H]

Molecular weight: Translated: 67367; Mature: 67236

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGHYRSNLRDVEFNLFELLERDRLFGAQPYGDIDLDTAKFILREVDRLAREDLAESFEEA
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DRHPPVYDPSTRSVTVTPEFAGAYKTWMDAEWWRLRVLPELGGTDAPNSLNWALAEFVLG
HCCCCCCCCCCCEEEECHHHCCHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHC
ANPALWTYVGMPTAARVVWHHGTERDRKIAQIGVEKRWGATMVLTEPDAGSDVGAGRTRA
CCCCEEEEECCCHHHHHEEECCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCC
VPNDDGTWNIHGVKRFITAGEHDLADNILHLVLARPVGVDGVGGPGTKGLSLFLVPKFHF
CCCCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECC
DPDTGELTGERNGVYATNVEKKMGMNVSTTCELTLGDDAPARGWLLGEVHDGIAQMFEVI
CCCCCCCCCCCCCEEEECCHHHHCCCCCCEEEEEECCCCCCCCEEEHHHHHHHHHHHHHH
EDARMMVGCKAIATLSSGYLNALDYAKQRVQGADLAQMSDKSAPRVTITRHPDVRRSLLT
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEECCCHHHHHHHH
QKAFAEGMRSLVLYTASWQDEIAVKTAAGEDAALAEAVNDLLLPIVKGYGSERSWVVLGT
HHHHHHHHHHHEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
ESLQTFGGSGYLREYPIEQYVRDAKIDTVYEGTTAIQAQDLFFRKIVRNRSVALTHLLDE
HHHHHCCCCCCCCCCCHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
VKAFAAASDPASPITGERRLLGDAVSNVEAIVAKMTGDLAASKDESTTVYRVGLNATRLL
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEEECCCHHHHH
FALGDVFVGWLLLRSAHIALTALAEPQAPSDISFYEGKVAAAQFFAREVLPKIAAEREIA
HHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHH
ETVGDFVMELDEAAF
HHHHHHHHHHHHHCC
>Mature Secondary Structure 
GHYRSNLRDVEFNLFELLERDRLFGAQPYGDIDLDTAKFILREVDRLAREDLAESFEEA
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DRHPPVYDPSTRSVTVTPEFAGAYKTWMDAEWWRLRVLPELGGTDAPNSLNWALAEFVLG
HCCCCCCCCCCCEEEECHHHCCHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHC
ANPALWTYVGMPTAARVVWHHGTERDRKIAQIGVEKRWGATMVLTEPDAGSDVGAGRTRA
CCCCEEEEECCCHHHHHEEECCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCC
VPNDDGTWNIHGVKRFITAGEHDLADNILHLVLARPVGVDGVGGPGTKGLSLFLVPKFHF
CCCCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECC
DPDTGELTGERNGVYATNVEKKMGMNVSTTCELTLGDDAPARGWLLGEVHDGIAQMFEVI
CCCCCCCCCCCCCEEEECCHHHHCCCCCCEEEEEECCCCCCCCEEEHHHHHHHHHHHHHH
EDARMMVGCKAIATLSSGYLNALDYAKQRVQGADLAQMSDKSAPRVTITRHPDVRRSLLT
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEECCCHHHHHHHH
QKAFAEGMRSLVLYTASWQDEIAVKTAAGEDAALAEAVNDLLLPIVKGYGSERSWVVLGT
HHHHHHHHHHHEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
ESLQTFGGSGYLREYPIEQYVRDAKIDTVYEGTTAIQAQDLFFRKIVRNRSVALTHLLDE
HHHHHCCCCCCCCCCCHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
VKAFAAASDPASPITGERRLLGDAVSNVEAIVAKMTGDLAASKDESTTVYRVGLNATRLL
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEEECCCHHHHH
FALGDVFVGWLLLRSAHIALTALAEPQAPSDISFYEGKVAAAQFFAREVLPKIAAEREIA
HHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHH
ETVGDFVMELDEAAF
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8399220; 7857927 [H]