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The map label for this gene is ydbO [H]

Identifier: 119867559

GI number: 119867559

Start: 1625850

End: 1626872

Strand: Direct

Name: ydbO [H]

Synonym: Mkms_1511

Alternate gene names: 119867559

Gene position: 1625850-1626872 (Clockwise)

Preceding gene: 119867558

Following gene: 119867561

Centisome position: 28.34

GC content: 69.6

Gene sequence:

>1023_bases
ATGACCCACGAACCCAAGCGCGCGCACCACAGCCACGATCACCACCGCGAGCACTCTCACGAGCATCACGGGGGCAAGTT
GAGTGCCGCGATTCGCGAGGTGTTCGCCCCGCACAGCCACGACGCCTCCGACAGCATCGACGATGCGCTGGAGTCCAGCG
CCGCAGGGGTTCGGGCGGTGAAGATCAGCCTGCTCGCGCTCGGTGCGACAGCGGTGGCGCAGTTGGTGATCGTGCTGGTC
TCCGGGTCGGTCGCGTTGCTCGCCGACACCATCCACAACTTCTCCGACGCCCTCACGGCCATCCCGCTGTGGGTCGCGTT
CGTGGTCGGCACCAAGGCGGCCACCCGGCGCTACACCTACGGATTCGGTCGGGCCGAGGACATCGCCGGGCTGTTCGTCG
TCGCGATGATCGCGCTGTCGGCGATCGTTGCGGGCGTGGAATCGATCCGCCGCCTCATCAACCCGGTGCCGATCGAGAAC
GTCGGGTGGGTGGCCGTCGCCGGTCTGGTCGGGTTCGTCGGCAACGAACTCGTTGCGCTCTACCGCATCCGGGTCGGGCG
CCGCATCGGCTCGGTCGCCCTGGTCGCCGACGGACTGCATGCCCGCACTGACGGATTCACCTCGCTGGCAGTGCTTTTCG
GCGCCGGCGGCGTCGCGCTGGGCTTCCCGCTCGCCGATCCCATCATCGGCCTGGTCATCACCGTTGCCATCCTCGCCGTG
CTGCGCACCGCGGTACGTGACGTCTTCCGCCGCCTCATGGACGGTGTGGAACCGGAGCTGGTCGACAAAGCCGAAGCCGC
ACTCGCCGCCGAACCCGGCGTCACCGACGTGCGCGCCGTGCGGATGCGGTGGATCGGCCACCGGCTACACGCCGACGCCG
AGCTCGACATCGACCCCGCCACCAGCCTCGCCGACGCCCACCGCATCGCCCACGAGGCGGAGCACACCCTGACCCACGCC
GTTCCGAAACTGTCGTCCGCGCTGGTGCACGCCTACCCGGCGGAGCCGTCCCGGCGTCGCTAG

Upstream 100 bases:

>100_bases
CCGGCCCGGGTGTCCCCGGTCATCACCGTGACGCGTCCGACCTCGCCGCCCTGCACGCGGACGTTCCCGCCGCCAGCCCA
TCGAAGAACGGACGACGCGC

Downstream 100 bases:

>100_bases
CGGGTCAACCCCAGCAGCGGCGGGACAAGGTAGCGGCGCGCGAACGAGCGGGCGGCGTCGTCGTCACCGAGGGCGACGTT
CTGTGACGGCGTCAGCACGA

Product: cation diffusion facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MTHEPKRAHHSHDHHREHSHEHHGGKLSAAIREVFAPHSHDASDSIDDALESSAAGVRAVKISLLALGATAVAQLVIVLV
SGSVALLADTIHNFSDALTAIPLWVAFVVGTKAATRRYTYGFGRAEDIAGLFVVAMIALSAIVAGVESIRRLINPVPIEN
VGWVAVAGLVGFVGNELVALYRIRVGRRIGSVALVADGLHARTDGFTSLAVLFGAGGVALGFPLADPIIGLVITVAILAV
LRTAVRDVFRRLMDGVEPELVDKAEAALAAEPGVTDVRAVRMRWIGHRLHADAELDIDPATSLADAHRIAHEAEHTLTHA
VPKLSSALVHAYPAEPSRRR

Sequences:

>Translated_340_residues
MTHEPKRAHHSHDHHREHSHEHHGGKLSAAIREVFAPHSHDASDSIDDALESSAAGVRAVKISLLALGATAVAQLVIVLV
SGSVALLADTIHNFSDALTAIPLWVAFVVGTKAATRRYTYGFGRAEDIAGLFVVAMIALSAIVAGVESIRRLINPVPIEN
VGWVAVAGLVGFVGNELVALYRIRVGRRIGSVALVADGLHARTDGFTSLAVLFGAGGVALGFPLADPIIGLVITVAILAV
LRTAVRDVFRRLMDGVEPELVDKAEAALAAEPGVTDVRAVRMRWIGHRLHADAELDIDPATSLADAHRIAHEAEHTLTHA
VPKLSSALVHAYPAEPSRRR
>Mature_339_residues
THEPKRAHHSHDHHREHSHEHHGGKLSAAIREVFAPHSHDASDSIDDALESSAAGVRAVKISLLALGATAVAQLVIVLVS
GSVALLADTIHNFSDALTAIPLWVAFVVGTKAATRRYTYGFGRAEDIAGLFVVAMIALSAIVAGVESIRRLINPVPIENV
GWVAVAGLVGFVGNELVALYRIRVGRRIGSVALVADGLHARTDGFTSLAVLFGAGGVALGFPLADPIIGLVITVAILAVL
RTAVRDVFRRLMDGVEPELVDKAEAALAAEPGVTDVRAVRMRWIGHRLHADAELDIDPATSLADAHRIAHEAEHTLTHAV
PKLSSALVHAYPAEPSRRR

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=260, Percent_Identity=26.1538461538462, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 36090; Mature: 35959

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHEPKRAHHSHDHHREHSHEHHGGKLSAAIREVFAPHSHDASDSIDDALESSAAGVRAV
CCCCCCCHHCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHH
KISLLALGATAVAQLVIVLVSGSVALLADTIHNFSDALTAIPLWVAFVVGTKAATRRYTY
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHC
GFGRAEDIAGLFVVAMIALSAIVAGVESIRRLINPVPIENVGWVAVAGLVGFVGNELVAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
YRIRVGRRIGSVALVADGLHARTDGFTSLAVLFGAGGVALGFPLADPIIGLVITVAILAV
HHHHHHHHHCCHHHEECCCHHCCCCHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHH
LRTAVRDVFRRLMDGVEPELVDKAEAALAAEPGVTDVRAVRMRWIGHRLHADAELDIDPA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCH
TSLADAHRIAHEAEHTLTHAVPKLSSALVHAYPAEPSRRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
THEPKRAHHSHDHHREHSHEHHGGKLSAAIREVFAPHSHDASDSIDDALESSAAGVRAV
CCCCCCHHCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHH
KISLLALGATAVAQLVIVLVSGSVALLADTIHNFSDALTAIPLWVAFVVGTKAATRRYTY
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHC
GFGRAEDIAGLFVVAMIALSAIVAGVESIRRLINPVPIENVGWVAVAGLVGFVGNELVAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
YRIRVGRRIGSVALVADGLHARTDGFTSLAVLFGAGGVALGFPLADPIIGLVITVAILAV
HHHHHHHHHCCHHHEECCCHHCCCCHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHH
LRTAVRDVFRRLMDGVEPELVDKAEAALAAEPGVTDVRAVRMRWIGHRLHADAELDIDPA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCH
TSLADAHRIAHEAEHTLTHAVPKLSSALVHAYPAEPSRRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]