| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is yceL [C]
Identifier: 119867513
GI number: 119867513
Start: 1576600
End: 1577859
Strand: Direct
Name: yceL [C]
Synonym: Mkms_1463
Alternate gene names: 119867513
Gene position: 1576600-1577859 (Clockwise)
Preceding gene: 119867512
Following gene: 119867514
Centisome position: 27.48
GC content: 64.21
Gene sequence:
>1260_bases ATGACACTGCTGTCGGGCTTCACAAGCTTCGGCTGGCCAAGTCGCCTACTGATGATCAACCAGTTCGGCATCAACCTCGG TTTCTACATGCTGATGCCTTACCTCGCGGGTTACCTGGCCGGCCCACTGGGTCTGGCGGCCTGGGCCATCGGACTGGTAT TGGGGGTGCGGAACTTCTCCCAGCAGGGCATGTTCATCATCGGTGGCACGCTCGCCGACCGGTGGGGATATAAGCCGCTC ATCGTCAGCGGCTGTGTGCTGCGCACCGCAGGGTTCGGTCTGCTAGCCTTCGCCGACACCTTGCCTGCAGTGCTGATCGC CTCGGCGGCAACAGGTTTCGCCGGTGCGCTGTTCAATCCGGCCGTGCGCGCCTACCTCGCCGCTGATGCCGGACCGCGGC GACTCGAAGCGTTCGCGCTGTTCAACGTGTTCTACCAGGCGGGGATTCTGGCTGGTCCGCTCGTCGGTTTAGCGCTGATG CTGCTCGACTTCCGCACGACCGCGGCCGCCGCGGCGGTGGTCTTCGCGGGACTGACTGTTGCGCAACTGTTCGCACTGCC GCAGCGAGTGGGTGACTCACCGCGAGAGAAGACCTCGGTGTGGCAGGACTGGCGCCGCGTTGCAGCCAACCGGTCCTTCC TGTTGTTCGCCGCAGCCATGATTGGATCGTATGTGCTGTCGTTCCAGGTGTACCTCGCTCTGCCGCTGCAGGCCCGGGAT CTGTTCCCACAGCACGATGCTGTCGTCACCGCCATGATCTTCGTGGTGTCTGGACTGGTCGCGGTGATCGGTCAGCTGCG CATCACGCGATGGTTCGCACGCCGTTGGGGGTCAGGGCGATCGCTGGTCATCGGCATGCTGATTCTCGCGGTTTCGTTCC TGCCTTTAGTGGCGTTGCCCGACGACACGCGCGCGGGCCGTGTGGCGGCAGCCACCGCACTGCTCATCGCCACAGCCGTG CTGGCGGTGGGCTCGGCCGCGGTCTTCCCGTTCGAGATGGACACGGTGGTATCGCTAGCTGACAACAAGCTCGTCGGTAC GCACTACGGCTTCTACAACACCATCGTCGGCATCGGAATTCTTGGCGGCAATCTCGCCACCGGCTCCGTCATGCAGATCA CCCGCGAGCTCGGATACCCCGAACTCGTCTGGGTCCTGCTGGCCAGTATCGGGCTGCTGTCGGCCGCCGCGCTGTACCGC CTCGATCGACGCGGCCGCCTGCAACCGCAACAGCCCACAGTTGACGTCGCAACGTCATAA
Upstream 100 bases:
>100_bases CGCCAAGCGAACCGGCCACCATTGAGGATCCGCTGGCGCACACCGTCACCGCCTGGACGCGGTGCGCCACCGTCATCGAC CCGACCCAGGAGCTGCCGCG
Downstream 100 bases:
>100_bases CCGCAGCGGCAGGTGCACATTCGCGACGACGCGCCCAATCGCGCAACCCGCCATCTACGTAGTAACTACGTAGATGGCGG GTACGGTGATACCGGGCTGC
Product: major facilitator superfamily transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MTLLSGFTSFGWPSRLLMINQFGINLGFYMLMPYLAGYLAGPLGLAAWAIGLVLGVRNFSQQGMFIIGGTLADRWGYKPL IVSGCVLRTAGFGLLAFADTLPAVLIASAATGFAGALFNPAVRAYLAADAGPRRLEAFALFNVFYQAGILAGPLVGLALM LLDFRTTAAAAAVVFAGLTVAQLFALPQRVGDSPREKTSVWQDWRRVAANRSFLLFAAAMIGSYVLSFQVYLALPLQARD LFPQHDAVVTAMIFVVSGLVAVIGQLRITRWFARRWGSGRSLVIGMLILAVSFLPLVALPDDTRAGRVAAATALLIATAV LAVGSAAVFPFEMDTVVSLADNKLVGTHYGFYNTIVGIGILGGNLATGSVMQITRELGYPELVWVLLASIGLLSAAALYR LDRRGRLQPQQPTVDVATS
Sequences:
>Translated_419_residues MTLLSGFTSFGWPSRLLMINQFGINLGFYMLMPYLAGYLAGPLGLAAWAIGLVLGVRNFSQQGMFIIGGTLADRWGYKPL IVSGCVLRTAGFGLLAFADTLPAVLIASAATGFAGALFNPAVRAYLAADAGPRRLEAFALFNVFYQAGILAGPLVGLALM LLDFRTTAAAAAVVFAGLTVAQLFALPQRVGDSPREKTSVWQDWRRVAANRSFLLFAAAMIGSYVLSFQVYLALPLQARD LFPQHDAVVTAMIFVVSGLVAVIGQLRITRWFARRWGSGRSLVIGMLILAVSFLPLVALPDDTRAGRVAAATALLIATAV LAVGSAAVFPFEMDTVVSLADNKLVGTHYGFYNTIVGIGILGGNLATGSVMQITRELGYPELVWVLLASIGLLSAAALYR LDRRGRLQPQQPTVDVATS >Mature_418_residues TLLSGFTSFGWPSRLLMINQFGINLGFYMLMPYLAGYLAGPLGLAAWAIGLVLGVRNFSQQGMFIIGGTLADRWGYKPLI VSGCVLRTAGFGLLAFADTLPAVLIASAATGFAGALFNPAVRAYLAADAGPRRLEAFALFNVFYQAGILAGPLVGLALML LDFRTTAAAAAVVFAGLTVAQLFALPQRVGDSPREKTSVWQDWRRVAANRSFLLFAAAMIGSYVLSFQVYLALPLQARDL FPQHDAVVTAMIFVVSGLVAVIGQLRITRWFARRWGSGRSLVIGMLILAVSFLPLVALPDDTRAGRVAAATALLIATAVL AVGSAAVFPFEMDTVVSLADNKLVGTHYGFYNTIVGIGILGGNLATGSVMQITRELGYPELVWVLLASIGLLSAAALYRL DRRGRLQPQQPTVDVATS
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI87081828, Length=383, Percent_Identity=28.9817232375979, Blast_Score=135, Evalue=4e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 44599; Mature: 44468
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: PS50850 MFS ; PS00284 SERPIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLSGFTSFGWPSRLLMINQFGINLGFYMLMPYLAGYLAGPLGLAAWAIGLVLGVRNFS CCCCCCCCCCCCCHHEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QQGMFIIGGTLADRWGYKPLIVSGCVLRTAGFGLLAFADTLPAVLIASAATGFAGALFNP CCCEEEEECCHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVRAYLAADAGPRRLEAFALFNVFYQAGILAGPLVGLALMLLDFRTTAAAAAVVFAGLTV HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQLFALPQRVGDSPREKTSVWQDWRRVAANRSFLLFAAAMIGSYVLSFQVYLALPLQARD HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCHHHH LFPQHDAVVTAMIFVVSGLVAVIGQLRITRWFARRWGSGRSLVIGMLILAVSFLPLVALP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECC DDTRAGRVAAATALLIATAVLAVGSAAVFPFEMDTVVSLADNKLVGTHYGFYNTIVGIGI CCCCCCHHHHHHHHHHHHHHHHHCCHHCCCEEHHHHHHHHCCCEEECCCHHHHHHHHHHH LGGNLATGSVMQITRELGYPELVWVLLASIGLLSAAALYRLDRRGRLQPQQPTVDVATS CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCC >Mature Secondary Structure TLLSGFTSFGWPSRLLMINQFGINLGFYMLMPYLAGYLAGPLGLAAWAIGLVLGVRNFS CCCCCCCCCCCCHHEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QQGMFIIGGTLADRWGYKPLIVSGCVLRTAGFGLLAFADTLPAVLIASAATGFAGALFNP CCCEEEEECCHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVRAYLAADAGPRRLEAFALFNVFYQAGILAGPLVGLALMLLDFRTTAAAAAVVFAGLTV HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQLFALPQRVGDSPREKTSVWQDWRRVAANRSFLLFAAAMIGSYVLSFQVYLALPLQARD HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCHHHH LFPQHDAVVTAMIFVVSGLVAVIGQLRITRWFARRWGSGRSLVIGMLILAVSFLPLVALP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECC DDTRAGRVAAATALLIATAVLAVGSAAVFPFEMDTVVSLADNKLVGTHYGFYNTIVGIGI CCCCCCHHHHHHHHHHHHHHHHHCCHHCCCEEHHHHHHHHCCCEEECCCHHHHHHHHHHH LGGNLATGSVMQITRELGYPELVWVLLASIGLLSAAALYRLDRRGRLQPQQPTVDVATS CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]