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The map label for this gene is ylbL [H]

Identifier: 119867482

GI number: 119867482

Start: 1535967

End: 1536995

Strand: Direct

Name: ylbL [H]

Synonym: Mkms_1432

Alternate gene names: 119867482

Gene position: 1535967-1536995 (Clockwise)

Preceding gene: 119867478

Following gene: 119867483

Centisome position: 26.77

GC content: 66.96

Gene sequence:

>1029_bases
GTGAACAGGCGGATTCTGACGCTGCTGATCGCGCTCGTCCCGGTCGTGGCGTTCGGCGTGCTGCTCTCTGCGGTGACGGT
CCCGTTCGTGTCGCTGGGCCCCGGACCCACGTTCGACACGCTCGGCGAGGTGGACGGCAAAGAGGTCGTCGACATCACCG
GCACCGAGGTGAAGCCGACGTCGGGGCACCTGAACATGACCACGGTGTCGCAGCGCGATGGGCTGACCCTGGCGCAAGCT
CTGACGCTGTGGATGTCGGGCCGCGAGCAGTTGGTGCCCCGCGAACTGGTCTACCCGCCCGACAAGAGCAAGGACGAGAT
CGACGAGGCCAACACCGCCGATTTCCGCAACTCGGAGGCCAACGCCGAGTACGCCGCGCTGTCGTACCTGAAGTATCCGC
GCGCGGTCACCGTCGAGAGCGTGACCGATCCCGGTCCGTCGGCGGGCAAGCTCAAGGAGGGCGACGCGATCGACGCGGTC
AACGGCAAGCCGGTGGCCACCGTCGACGAGTTCCAGGCTTTGTTGAAGACCACCAAACCCGGTGACGAACTGGTCCTCGA
CTTCCGGCGCAAGGACGAGAACGATCCGCTCGGGACCACCACCGTCGAACTCGGCACGAACCCCGACCGCGACTACGGGT
ACCTCGGCATCGGCGTCATCGACGCACCCTGGGCGTCGTTCAAGATCGACTTCAACCTGGCCAACATCGGCGGGCCGTCG
GCGGGCCTGATGTTCAGCCTCGCGGTGGTCGACAAACTCACCTCGGGCGACCTCAACGACGGCAAGTTCGTCGCGGGCAC
CGGCACCATCACCGGCGACGGGGAGGTCGGGTCGATCGGCGGCATCACGCACAAGATGGTCGGTGCGCGCGACGCCGGGG
CCACCGTGTTTCTCGTGCCCGCCGACAACTGCGCCGAGGCCAAGTCCGATCCGCAGGACGGGCTGGAACTGGTCAAGGTC
GGCACACTGACCGAAGCCGTCGACGCGCTCAACGCGATTTCCGCTGGTGGCGAACCGCCACGGTGCTGA

Upstream 100 bases:

>100_bases
GTCAGCCATGCCGTCAACGGTACTCACCGGCGCCGGGTGGTGCGGTGTGCCCGGTCACGCTGTCAGTGAACGGGCGCGGC
GCTCCCTTACTGTGGGCGGC

Downstream 100 bases:

>100_bases
CCGAGGCGTGGGCAGTCGATGCGTAGAGTTGGGGCACGTCGGACACGACGTCCCCTTTCCCGTGAGTGAAATTGGAGACA
CCAAGTGGGTATGCGGCCCC

Product: PDZ/DHR/GLGF domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MNRRILTLLIALVPVVAFGVLLSAVTVPFVSLGPGPTFDTLGEVDGKEVVDITGTEVKPTSGHLNMTTVSQRDGLTLAQA
LTLWMSGREQLVPRELVYPPDKSKDEIDEANTADFRNSEANAEYAALSYLKYPRAVTVESVTDPGPSAGKLKEGDAIDAV
NGKPVATVDEFQALLKTTKPGDELVLDFRRKDENDPLGTTTVELGTNPDRDYGYLGIGVIDAPWASFKIDFNLANIGGPS
AGLMFSLAVVDKLTSGDLNDGKFVAGTGTITGDGEVGSIGGITHKMVGARDAGATVFLVPADNCAEAKSDPQDGLELVKV
GTLTEAVDALNAISAGGEPPRC

Sequences:

>Translated_342_residues
MNRRILTLLIALVPVVAFGVLLSAVTVPFVSLGPGPTFDTLGEVDGKEVVDITGTEVKPTSGHLNMTTVSQRDGLTLAQA
LTLWMSGREQLVPRELVYPPDKSKDEIDEANTADFRNSEANAEYAALSYLKYPRAVTVESVTDPGPSAGKLKEGDAIDAV
NGKPVATVDEFQALLKTTKPGDELVLDFRRKDENDPLGTTTVELGTNPDRDYGYLGIGVIDAPWASFKIDFNLANIGGPS
AGLMFSLAVVDKLTSGDLNDGKFVAGTGTITGDGEVGSIGGITHKMVGARDAGATVFLVPADNCAEAKSDPQDGLELVKV
GTLTEAVDALNAISAGGEPPRC
>Mature_342_residues
MNRRILTLLIALVPVVAFGVLLSAVTVPFVSLGPGPTFDTLGEVDGKEVVDITGTEVKPTSGHLNMTTVSQRDGLTLAQA
LTLWMSGREQLVPRELVYPPDKSKDEIDEANTADFRNSEANAEYAALSYLKYPRAVTVESVTDPGPSAGKLKEGDAIDAV
NGKPVATVDEFQALLKTTKPGDELVLDFRRKDENDPLGTTTVELGTNPDRDYGYLGIGVIDAPWASFKIDFNLANIGGPS
AGLMFSLAVVDKLTSGDLNDGKFVAGTGTITGDGEVGSIGGITHKMVGARDAGATVFLVPADNCAEAKSDPQDGLELVKV
GTLTEAVDALNAISAGGEPPRC

Specific function: Unknown

COG id: COG3480

COG function: function code T; Predicted secreted protein containing a PDZ domain

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR008269
- InterPro:   IPR020568 [H]

Pfam domain/function: PF05362 Lon_C; PF00595 PDZ [H]

EC number: NA

Molecular weight: Translated: 35834; Mature: 35834

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRILTLLIALVPVVAFGVLLSAVTVPFVSLGPGPTFDTLGEVDGKEVVDITGTEVKPT
CCCHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCHHHHCCCCCCEEEEECCCEECCC
SGHLNMTTVSQRDGLTLAQALTLWMSGREQLVPRELVYPPDKSKDEIDEANTADFRNSEA
CCCEEEEEECCCCCCHHHHHHHHHHCCHHHCCCHHHCCCCCCCHHHHCCCCCCCCCCCCC
NAEYAALSYLKYPRAVTVESVTDPGPSAGKLKEGDAIDAVNGKPVATVDEFQALLKTTKP
CCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHCCCC
GDELVLDFRRKDENDPLGTTTVELGTNPDRDYGYLGIGVIDAPWASFKIDFNLANIGGPS
CHHEEEEEHHCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCC
AGLMFSLAVVDKLTSGDLNDGKFVAGTGTITGDGEVGSIGGITHKMVGARDAGATVFLVP
HHHHHHHHHHHHHCCCCCCCCEEEEECCEEECCCCCCCCCCCHHHHHCCCCCCCEEEEEE
ADNCAEAKSDPQDGLELVKVGTLTEAVDALNAISAGGEPPRC
CCCCHHCCCCCHHHHHEEEHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNRRILTLLIALVPVVAFGVLLSAVTVPFVSLGPGPTFDTLGEVDGKEVVDITGTEVKPT
CCCHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCHHHHCCCCCCEEEEECCCEECCC
SGHLNMTTVSQRDGLTLAQALTLWMSGREQLVPRELVYPPDKSKDEIDEANTADFRNSEA
CCCEEEEEECCCCCCHHHHHHHHHHCCHHHCCCHHHCCCCCCCHHHHCCCCCCCCCCCCC
NAEYAALSYLKYPRAVTVESVTDPGPSAGKLKEGDAIDAVNGKPVATVDEFQALLKTTKP
CCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHCCCC
GDELVLDFRRKDENDPLGTTTVELGTNPDRDYGYLGIGVIDAPWASFKIDFNLANIGGPS
CHHEEEEEHHCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCC
AGLMFSLAVVDKLTSGDLNDGKFVAGTGTITGDGEVGSIGGITHKMVGARDAGATVFLVP
HHHHHHHHHHHHHCCCCCCCCEEEEECCEEECCCCCCCCCCCHHHHHCCCCCCCEEEEEE
ADNCAEAKSDPQDGLELVKVGTLTEAVDALNAISAGGEPPRC
CCCCHHCCCCCHHHHHEEEHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]