Click here to switch to the map view.

The map label for this gene is ybfF [C]

Identifier: 119867470

GI number: 119867470

Start: 1519241

End: 1520080

Strand: Reverse

Name: ybfF [C]

Synonym: Mkms_1420

Alternate gene names: 119867470

Gene position: 1520080-1519241 (Counterclockwise)

Preceding gene: 119867473

Following gene: 119867469

Centisome position: 26.5

GC content: 70.12

Gene sequence:

>840_bases
ATGAGATCACGGGGGTCCGACAAGCCGCCGTCGGTGCGGGCTGGCACCATCGTGGACGTGAGCCTGCACGTGCATCGCTA
CGGTCCGCCGGAACCCGCCCAGCTGCTGGCTGTGCACGGGTTGACCGGCCACGGTCAGCGCTGGCAGACGCTGGCAACCC
GGTATCTGCCCGAGTTCTCCGTCGCCGCACCGGACTTGATCGGTCACGGCAGATCCTCGTGGGCGGCCCCGTGGACGTTG
GACGCCAACACCGACGCGCTCGCCAGCCTGCTCGACGCCGACGGGGGCGGTCCGGTCGTGGTGGTGGGACACTCCTTCGG
TGGTGCGGTCGCGCTGGCCCTGGCGGCGGCGCGGCCGGATCTCGTGTCGGGTCTGGTGCTGCTCGACCCGGCGGTCGGCC
TCGACGGTGAGTGGATGCGCGAGATCGCCGACGACATGTTCGCCTCCCCCGACTACACCGACCGGGCCGAGGCGCGGGCC
GAGAAGGTGTCGGGGTCATGGGGTGAGGTGGATTCCGCCGAACTGGACCGCGAACTCGACGAGCATCTGGTCACCCTGCC
GAACGGCCGCAGCGGGTGGCGGATCAGCATTCCGGCGATGATGTCGTACTGGAGTGAGCTGGCCCGGCCGGTGACGGTCC
CCCGAGACGGTACGCCGACCACCCTGGTGCGGGCGTCGCGCACCGACCCGCCGTACGCGACCGACGAGCTGCTCGCGACG
CTCGACGCCGCCCTCGGATCGGATCTTACTGTGCTGCAGTGGGATTGCGACCACATGGTGGGTCAGGCGAAACCGGCGGA
GACGGCTGCGGTCATCCGCGAACACCTCGAACGGCACTGA

Upstream 100 bases:

>100_bases
CGAACAGACGCACCACACCGCGCCGCCCCGGCTCGAGCAGCGAGCGCGGCTCGGTGTGCGCGGCGGTGGTCGCTTCGACG
TCCGGTGCGGTCATGAGGGC

Downstream 100 bases:

>100_bases
CGGTGGCGGCCATCACCGACGAGCAGGTGGAGGCCGTGCGCGCACTGGTGGCGCAGATTCCCCCGGGCCGGGTCGCCACC
TACGGTGACATCGCCGATGC

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Hydrolase; Lipase LipV; Alpha/Beta Hydrolase; Alpha/Beta Fold Family Hydrolase; Esterase; Hydrolase Alpha/Beta Fold Family Protein; Hydrolase Alpha/Beta Fold LipV

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MRSRGSDKPPSVRAGTIVDVSLHVHRYGPPEPAQLLAVHGLTGHGQRWQTLATRYLPEFSVAAPDLIGHGRSSWAAPWTL
DANTDALASLLDADGGGPVVVVGHSFGGAVALALAAARPDLVSGLVLLDPAVGLDGEWMREIADDMFASPDYTDRAEARA
EKVSGSWGEVDSAELDRELDEHLVTLPNGRSGWRISIPAMMSYWSELARPVTVPRDGTPTTLVRASRTDPPYATDELLAT
LDAALGSDLTVLQWDCDHMVGQAKPAETAAVIREHLERH

Sequences:

>Translated_279_residues
MRSRGSDKPPSVRAGTIVDVSLHVHRYGPPEPAQLLAVHGLTGHGQRWQTLATRYLPEFSVAAPDLIGHGRSSWAAPWTL
DANTDALASLLDADGGGPVVVVGHSFGGAVALALAAARPDLVSGLVLLDPAVGLDGEWMREIADDMFASPDYTDRAEARA
EKVSGSWGEVDSAELDRELDEHLVTLPNGRSGWRISIPAMMSYWSELARPVTVPRDGTPTTLVRASRTDPPYATDELLAT
LDAALGSDLTVLQWDCDHMVGQAKPAETAAVIREHLERH
>Mature_279_residues
MRSRGSDKPPSVRAGTIVDVSLHVHRYGPPEPAQLLAVHGLTGHGQRWQTLATRYLPEFSVAAPDLIGHGRSSWAAPWTL
DANTDALASLLDADGGGPVVVVGHSFGGAVALALAAARPDLVSGLVLLDPAVGLDGEWMREIADDMFASPDYTDRAEARA
EKVSGSWGEVDSAELDRELDEHLVTLPNGRSGWRISIPAMMSYWSELARPVTVPRDGTPTTLVRASRTDPPYATDELLAT
LDAALGSDLTVLQWDCDHMVGQAKPAETAAVIREHLERH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.-.- [C]

Molecular weight: Translated: 29901; Mature: 29901

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSRGSDKPPSVRAGTIVDVSLHVHRYGPPEPAQLLAVHGLTGHGQRWQTLATRYLPEFS
CCCCCCCCCCCCCCCEEEEEEEEEEECCCCCHHHEEEEECCCCCCHHHHHHHHHHCCCCC
VAAPDLIGHGRSSWAAPWTLDANTDALASLLDADGGGPVVVVGHSFGGAVALALAAARPD
CCCCHHHCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCHH
LVSGLVLLDPAVGLDGEWMREIADDMFASPDYTDRAEARAEKVSGSWGEVDSAELDRELD
HHHCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHH
EHLVTLPNGRSGWRISIPAMMSYWSELARPVTVPRDGTPTTLVRASRTDPPYATDELLAT
HHEEECCCCCCCEEEEHHHHHHHHHHHHCCEECCCCCCCCEEEEECCCCCCCHHHHHHHH
LDAALGSDLTVLQWDCDHMVGQAKPAETAAVIREHLERH
HHHHHCCCCEEEEECHHHHHCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MRSRGSDKPPSVRAGTIVDVSLHVHRYGPPEPAQLLAVHGLTGHGQRWQTLATRYLPEFS
CCCCCCCCCCCCCCCEEEEEEEEEEECCCCCHHHEEEEECCCCCCHHHHHHHHHHCCCCC
VAAPDLIGHGRSSWAAPWTLDANTDALASLLDADGGGPVVVVGHSFGGAVALALAAARPD
CCCCHHHCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCHH
LVSGLVLLDPAVGLDGEWMREIADDMFASPDYTDRAEARAEKVSGSWGEVDSAELDRELD
HHHCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHH
EHLVTLPNGRSGWRISIPAMMSYWSELARPVTVPRDGTPTTLVRASRTDPPYATDELLAT
HHEEECCCCCCCEEEEHHHHHHHHHHHHCCEECCCCCCCCEEEEECCCCCCCHHHHHHHH
LDAALGSDLTVLQWDCDHMVGQAKPAETAAVIREHLERH
HHHHHCCCCEEEEECHHHHHCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA