| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is cshA [H]
Identifier: 119867461
GI number: 119867461
Start: 1510914
End: 1512437
Strand: Reverse
Name: cshA [H]
Synonym: Mkms_1411
Alternate gene names: 119867461
Gene position: 1512437-1510914 (Counterclockwise)
Preceding gene: 119867463
Following gene: 119867460
Centisome position: 26.36
GC content: 70.67
Gene sequence:
>1524_bases ATGACTCCTTTGACAACATCTGTTGACATGACATTCGCCAGCCTTGGCGTGCGCGACGAGATCTGCCGCGCACTCGCCGA GGAGGGCATCCACCAACCCTTCGCCATCCAGGAACTGACGCTGCCCATGGCGTTGGCCGGCGACGACCTGATCGGTCAGG CGCGCACCGGGATGGGCAAGACCTATGCCTTCGGTGTGCCGCTGCTGCAGCGCGTCACCACCGACACCGAGAAGGAACTG AGCGGGATCCCCCGCGCCCTGATCGTCGTGCCCACCCGCGAGCTGTGCCTGCAGGTCCACAGCGACCTGTCCTTGGCCGC CAAGTACCTGACCGCCGGCGACCGCAAGCTCTCCGTCGTATCGATCTACGGTGGCCGCCCCTACGAGCCCCAGATCGAGT CGCTGCGCAAGGGCGCCGACGTCGTGGTCGGCACCCCCGGCCGGCTGCTCGACCTCGCCCAGCAGGGTCACCTGCAGCTG GGCGGCCTATCGGTGCTGGTGCTCGACGAGGCCGACGAGATGCTCGACCTGGGCTTCCTGCCCGATATCGAGCGCATCCT GCGGCAGACCCCCGACACCCGGCAGGCGATGCTGTTCTCCGCCACGATGCCGGATCCGATCATCACGCTGGCCCGCACGT TCATGAACCAGCCCACCCACATTCGCGCCGAGTCGCCGCAGTCGTCGGCCACCCACGACACCACCGCGCAGTTCGCCTAC CGCGCCCACGCGCTGGACAAGGTCGAGATGGTCAGCCGGATCCTGCAGGCCGAGGGCCGTGGCGCGACGATGATCTTCAC CCGCACCAAGCGCACCGCGCAGAAGGTCGCCGACGAACTCGCCGAGCGCGGGTTCAAGGTCGGCGCCGTGCACGGTGACC TGGGCCAGGGCGCGCGCGAGAAGGCGCTCAAGAGCTTCCGCACCGGTGAGGTCGACGTGCTGGTCGCCACCGACGTCGCC GCGCGCGGCATCGACATCGACGACATCACCCACGTCATCAACTTCCAGATCCCCGAGGACGAGCAGGCCTACGTGCACCG CATCGGCCGCACCGGGCGTGCGGGCAAGACCGGTGTCGCGGTCACGCTGGTCGACTGGGACGAACTCCCCCGCTGGTCGA TGATCGACAAGGCGCTGGGTCTGAACACGCCCGACCCCGCCGAGACCTACTCCAGCTCACCCCACCTCTACGAGGAGCTG GGCATTCCGACCGAGGCCGGCGGTTCGGTGGGTGAGCCCAAGGCCCGCGCGGCCGCGAAGCGTTCCGAGCGCCCCGCCCG CGGCGAGCGGGACGGTGACCGCGACGGGGACGACAAGCCCGCCCGCAGCCGGTCGCGCAACCGTCGGCGCACCCGCGCGG GCAAGCCCGTCACCGGGCACGTCGAGGGGTCGGCCGAGCAGCCGGCCGTCGAGGCCGCCGACGGCAACGGTGACGGGGAC ACCGAGGCCGGTGGCGAGTCCGGCCAGGCCGGGCGTCGGCGCCGCCGTCGGCGTCCGCGCAAGGCCGCGCCCGCGACCAG CTGA
Upstream 100 bases:
>100_bases GACGGGGCGACGAGGCCGCTTCATCGTCAAACTCGTGTGCGCGTGGAAAACCACGAAGCCGGCCACGAGGGTCGACTATG AAAGGCCACGTTCACCAAGC
Downstream 100 bases:
>100_bases CCCGACGGTCAGCTCCTTCAGTGGTCAAACCCGAGCGCCGCACCCGCGGTGACGTGATGGCCGCCGTCGCGATCGCAGCG GTGATCGCGGTGATCGCGGC
Product: DEAD/DEAH box helicase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 507; Mature: 506
Protein sequence:
>507_residues MTPLTTSVDMTFASLGVRDEICRALAEEGIHQPFAIQELTLPMALAGDDLIGQARTGMGKTYAFGVPLLQRVTTDTEKEL SGIPRALIVVPTRELCLQVHSDLSLAAKYLTAGDRKLSVVSIYGGRPYEPQIESLRKGADVVVGTPGRLLDLAQQGHLQL GGLSVLVLDEADEMLDLGFLPDIERILRQTPDTRQAMLFSATMPDPIITLARTFMNQPTHIRAESPQSSATHDTTAQFAY RAHALDKVEMVSRILQAEGRGATMIFTRTKRTAQKVADELAERGFKVGAVHGDLGQGAREKALKSFRTGEVDVLVATDVA ARGIDIDDITHVINFQIPEDEQAYVHRIGRTGRAGKTGVAVTLVDWDELPRWSMIDKALGLNTPDPAETYSSSPHLYEEL GIPTEAGGSVGEPKARAAAKRSERPARGERDGDRDGDDKPARSRSRNRRRTRAGKPVTGHVEGSAEQPAVEAADGNGDGD TEAGGESGQAGRRRRRRRPRKAAPATS
Sequences:
>Translated_507_residues MTPLTTSVDMTFASLGVRDEICRALAEEGIHQPFAIQELTLPMALAGDDLIGQARTGMGKTYAFGVPLLQRVTTDTEKEL SGIPRALIVVPTRELCLQVHSDLSLAAKYLTAGDRKLSVVSIYGGRPYEPQIESLRKGADVVVGTPGRLLDLAQQGHLQL GGLSVLVLDEADEMLDLGFLPDIERILRQTPDTRQAMLFSATMPDPIITLARTFMNQPTHIRAESPQSSATHDTTAQFAY RAHALDKVEMVSRILQAEGRGATMIFTRTKRTAQKVADELAERGFKVGAVHGDLGQGAREKALKSFRTGEVDVLVATDVA ARGIDIDDITHVINFQIPEDEQAYVHRIGRTGRAGKTGVAVTLVDWDELPRWSMIDKALGLNTPDPAETYSSSPHLYEEL GIPTEAGGSVGEPKARAAAKRSERPARGERDGDRDGDDKPARSRSRNRRRTRAGKPVTGHVEGSAEQPAVEAADGNGDGD TEAGGESGQAGRRRRRRRPRKAAPATS >Mature_506_residues TPLTTSVDMTFASLGVRDEICRALAEEGIHQPFAIQELTLPMALAGDDLIGQARTGMGKTYAFGVPLLQRVTTDTEKELS GIPRALIVVPTRELCLQVHSDLSLAAKYLTAGDRKLSVVSIYGGRPYEPQIESLRKGADVVVGTPGRLLDLAQQGHLQLG GLSVLVLDEADEMLDLGFLPDIERILRQTPDTRQAMLFSATMPDPIITLARTFMNQPTHIRAESPQSSATHDTTAQFAYR AHALDKVEMVSRILQAEGRGATMIFTRTKRTAQKVADELAERGFKVGAVHGDLGQGAREKALKSFRTGEVDVLVATDVAA RGIDIDDITHVINFQIPEDEQAYVHRIGRTGRAGKTGVAVTLVDWDELPRWSMIDKALGLNTPDPAETYSSSPHLYEELG IPTEAGGSVGEPKARAAAKRSERPARGERDGDRDGDDKPARSRSRNRRRTRAGKPVTGHVEGSAEQPAVEAADGNGDGDT EAGGESGQAGRRRRRRRPRKAAPATS
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI50659095, Length=379, Percent_Identity=36.9393139841689, Blast_Score=249, Evalue=4e-66, Organism=Homo sapiens, GI13129006, Length=365, Percent_Identity=38.9041095890411, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI4758138, Length=358, Percent_Identity=36.0335195530726, Blast_Score=239, Evalue=3e-63, Organism=Homo sapiens, GI222352149, Length=351, Percent_Identity=37.6068376068376, Blast_Score=239, Evalue=6e-63, Organism=Homo sapiens, GI45446747, Length=355, Percent_Identity=37.7464788732394, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI45446743, Length=355, Percent_Identity=37.7464788732394, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI224593278, Length=372, Percent_Identity=36.8279569892473, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI216548263, Length=365, Percent_Identity=37.5342465753425, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI13518015, Length=365, Percent_Identity=37.5342465753425, Blast_Score=228, Evalue=2e-59, Organism=Homo sapiens, GI262231852, Length=365, Percent_Identity=37.5342465753425, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI169881239, Length=352, Percent_Identity=38.3522727272727, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI13514809, Length=352, Percent_Identity=38.3522727272727, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI262118318, Length=367, Percent_Identity=37.3297002724796, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI148613856, Length=345, Percent_Identity=36.5217391304348, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI38201710, Length=345, Percent_Identity=36.5217391304348, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI301171467, Length=352, Percent_Identity=37.2159090909091, Blast_Score=225, Evalue=8e-59, Organism=Homo sapiens, GI41327771, Length=374, Percent_Identity=36.096256684492, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI301171475, Length=352, Percent_Identity=37.2159090909091, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI87196351, Length=352, Percent_Identity=37.2159090909091, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI21071032, Length=368, Percent_Identity=36.6847826086957, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI7661920, Length=360, Percent_Identity=33.6111111111111, Blast_Score=216, Evalue=5e-56, Organism=Homo sapiens, GI55749865, Length=352, Percent_Identity=34.0909090909091, Blast_Score=215, Evalue=1e-55, Organism=Homo sapiens, GI41327773, Length=388, Percent_Identity=33.2474226804124, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI20149629, Length=377, Percent_Identity=33.6870026525199, Blast_Score=201, Evalue=9e-52, Organism=Homo sapiens, GI164664518, Length=369, Percent_Identity=31.4363143631436, Blast_Score=199, Evalue=4e-51, Organism=Homo sapiens, GI51094101, Length=361, Percent_Identity=31.8559556786704, Blast_Score=199, Evalue=5e-51, Organism=Homo sapiens, GI164419743, Length=361, Percent_Identity=31.8559556786704, Blast_Score=199, Evalue=5e-51, Organism=Homo sapiens, GI188035877, Length=368, Percent_Identity=31.5217391304348, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI21040371, Length=355, Percent_Identity=31.5492957746479, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI31542656, Length=359, Percent_Identity=35.0974930362117, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI4758112, Length=355, Percent_Identity=30.9859154929577, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI18375623, Length=355, Percent_Identity=30.9859154929577, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI4503529, Length=356, Percent_Identity=32.0224719101124, Blast_Score=182, Evalue=6e-46, Organism=Homo sapiens, GI164419732, Length=356, Percent_Identity=34.2696629213483, Blast_Score=182, Evalue=7e-46, Organism=Homo sapiens, GI83700235, Length=356, Percent_Identity=31.7415730337079, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI8922886, Length=366, Percent_Identity=33.3333333333333, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI6005743, Length=366, Percent_Identity=32.7868852459016, Blast_Score=172, Evalue=8e-43, Organism=Homo sapiens, GI41327776, Length=375, Percent_Identity=30.1333333333333, Blast_Score=168, Evalue=9e-42, Organism=Homo sapiens, GI62241022, Length=348, Percent_Identity=33.9080459770115, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI256223453, Length=360, Percent_Identity=29.4444444444444, Blast_Score=165, Evalue=1e-40, Organism=Homo sapiens, GI38327634, Length=355, Percent_Identity=31.2676056338028, Blast_Score=164, Evalue=3e-40, Organism=Homo sapiens, GI41327779, Length=379, Percent_Identity=30.8707124010554, Blast_Score=163, Evalue=4e-40, Organism=Homo sapiens, GI13514831, Length=356, Percent_Identity=30.0561797752809, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI9506931, Length=387, Percent_Identity=29.7157622739018, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI62241024, Length=340, Percent_Identity=33.2352941176471, Blast_Score=159, Evalue=5e-39, Organism=Homo sapiens, GI4826686, Length=357, Percent_Identity=31.0924369747899, Blast_Score=152, Evalue=5e-37, Organism=Homo sapiens, GI38569505, Length=363, Percent_Identity=28.099173553719, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI38569503, Length=363, Percent_Identity=28.099173553719, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI17505907, Length=383, Percent_Identity=28.4595300261097, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI154759257, Length=414, Percent_Identity=28.743961352657, Blast_Score=127, Evalue=3e-29, Organism=Homo sapiens, GI256773275, Length=400, Percent_Identity=28.25, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI9966805, Length=323, Percent_Identity=28.1733746130031, Blast_Score=122, Evalue=7e-28, Organism=Homo sapiens, GI20336298, Length=194, Percent_Identity=34.020618556701, Blast_Score=99, Evalue=1e-20, Organism=Escherichia coli, GI87082221, Length=378, Percent_Identity=42.8571428571429, Blast_Score=298, Evalue=5e-82, Organism=Escherichia coli, GI1787016, Length=376, Percent_Identity=42.2872340425532, Blast_Score=291, Evalue=7e-80, Organism=Escherichia coli, GI1790214, Length=385, Percent_Identity=37.9220779220779, Blast_Score=255, Evalue=4e-69, Organism=Escherichia coli, GI1787605, Length=369, Percent_Identity=38.2113821138211, Blast_Score=231, Evalue=1e-61, Organism=Escherichia coli, GI1788930, Length=357, Percent_Identity=38.9355742296919, Blast_Score=218, Evalue=9e-58, Organism=Caenorhabditis elegans, GI115533224, Length=338, Percent_Identity=37.8698224852071, Blast_Score=237, Evalue=1e-62, Organism=Caenorhabditis elegans, GI17510309, Length=369, Percent_Identity=36.5853658536585, Blast_Score=231, Evalue=5e-61, Organism=Caenorhabditis elegans, GI17510307, Length=369, Percent_Identity=36.5853658536585, Blast_Score=231, Evalue=6e-61, Organism=Caenorhabditis elegans, GI71995514, Length=369, Percent_Identity=36.5853658536585, Blast_Score=231, Evalue=9e-61, Organism=Caenorhabditis elegans, GI32565321, Length=383, Percent_Identity=35.509138381201, Blast_Score=228, Evalue=6e-60, Organism=Caenorhabditis elegans, GI71995718, Length=371, Percent_Identity=37.1967654986523, Blast_Score=227, Evalue=1e-59, Organism=Caenorhabditis elegans, GI17537549, Length=367, Percent_Identity=36.2397820163488, Blast_Score=223, Evalue=1e-58, Organism=Caenorhabditis elegans, GI86570094, Length=501, Percent_Identity=32.5349301397206, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI17510559, Length=391, Percent_Identity=34.7826086956522, Blast_Score=221, Evalue=8e-58, Organism=Caenorhabditis elegans, GI71995724, Length=363, Percent_Identity=34.1597796143251, Blast_Score=215, Evalue=5e-56, Organism=Caenorhabditis elegans, GI17507121, Length=363, Percent_Identity=34.1597796143251, Blast_Score=215, Evalue=5e-56, Organism=Caenorhabditis elegans, GI71987143, Length=355, Percent_Identity=33.2394366197183, Blast_Score=213, Evalue=1e-55, Organism=Caenorhabditis elegans, GI17507945, Length=344, Percent_Identity=37.5, Blast_Score=206, Evalue=3e-53, Organism=Caenorhabditis elegans, GI17552642, Length=356, Percent_Identity=35.3932584269663, Blast_Score=204, Evalue=7e-53, Organism=Caenorhabditis elegans, GI71999644, Length=370, Percent_Identity=31.3513513513514, Blast_Score=204, Evalue=1e-52, Organism=Caenorhabditis elegans, GI71999646, Length=370, Percent_Identity=31.3513513513514, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17555296, Length=371, Percent_Identity=33.1536388140162, Blast_Score=202, Evalue=4e-52, Organism=Caenorhabditis elegans, GI17552114, Length=357, Percent_Identity=30.2521008403361, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI71982858, Length=364, Percent_Identity=31.8681318681319, Blast_Score=194, Evalue=7e-50, Organism=Caenorhabditis elegans, GI17507877, Length=391, Percent_Identity=31.9693094629156, Blast_Score=191, Evalue=6e-49, Organism=Caenorhabditis elegans, GI115532548, Length=377, Percent_Identity=33.1564986737401, Blast_Score=191, Evalue=1e-48, Organism=Caenorhabditis elegans, GI115532546, Length=377, Percent_Identity=33.1564986737401, Blast_Score=189, Evalue=3e-48, Organism=Caenorhabditis elegans, GI17507879, Length=389, Percent_Identity=30.8483290488432, Blast_Score=186, Evalue=3e-47, Organism=Caenorhabditis elegans, GI17507881, Length=394, Percent_Identity=31.2182741116751, Blast_Score=182, Evalue=4e-46, Organism=Caenorhabditis elegans, GI193208216, Length=407, Percent_Identity=29.97542997543, Blast_Score=172, Evalue=3e-43, Organism=Caenorhabditis elegans, GI17509811, Length=343, Percent_Identity=30.6122448979592, Blast_Score=169, Evalue=5e-42, Organism=Caenorhabditis elegans, GI193206561, Length=368, Percent_Identity=28.804347826087, Blast_Score=168, Evalue=7e-42, Organism=Caenorhabditis elegans, GI17536103, Length=391, Percent_Identity=28.9002557544757, Blast_Score=154, Evalue=8e-38, Organism=Caenorhabditis elegans, GI17536099, Length=380, Percent_Identity=28.9473684210526, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17536101, Length=383, Percent_Identity=28.9817232375979, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17507641, Length=392, Percent_Identity=30.8673469387755, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17505370, Length=368, Percent_Identity=30.1630434782609, Blast_Score=147, Evalue=2e-35, Organism=Caenorhabditis elegans, GI25148203, Length=406, Percent_Identity=26.1083743842365, Blast_Score=145, Evalue=6e-35, Organism=Caenorhabditis elegans, GI17556951, Length=350, Percent_Identity=29.7142857142857, Blast_Score=143, Evalue=3e-34, Organism=Caenorhabditis elegans, GI32564046, Length=379, Percent_Identity=31.1345646437995, Blast_Score=141, Evalue=7e-34, Organism=Caenorhabditis elegans, GI71990816, Length=359, Percent_Identity=27.8551532033426, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI25148291, Length=354, Percent_Identity=26.8361581920904, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17508543, Length=370, Percent_Identity=25.6756756756757, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17553716, Length=377, Percent_Identity=25.7294429708223, Blast_Score=124, Evalue=2e-28, Organism=Caenorhabditis elegans, GI71982862, Length=226, Percent_Identity=34.070796460177, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI71997889, Length=378, Percent_Identity=27.5132275132275, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI25148205, Length=332, Percent_Identity=24.6987951807229, Blast_Score=101, Evalue=7e-22, Organism=Caenorhabditis elegans, GI71987152, Length=85, Percent_Identity=43.5294117647059, Blast_Score=89, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17566630, Length=334, Percent_Identity=24.5508982035928, Blast_Score=87, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6324217, Length=357, Percent_Identity=37.2549019607843, Blast_Score=247, Evalue=3e-66, Organism=Saccharomyces cerevisiae, GI6325138, Length=370, Percent_Identity=38.6486486486486, Blast_Score=244, Evalue=3e-65, Organism=Saccharomyces cerevisiae, GI6324778, Length=348, Percent_Identity=39.6551724137931, Blast_Score=235, Evalue=1e-62, Organism=Saccharomyces cerevisiae, GI6321360, Length=372, Percent_Identity=38.1720430107527, Blast_Score=235, Evalue=1e-62, Organism=Saccharomyces cerevisiae, GI6320224, Length=386, Percent_Identity=33.9378238341969, Blast_Score=218, Evalue=3e-57, Organism=Saccharomyces cerevisiae, GI6321856, Length=378, Percent_Identity=36.5079365079365, Blast_Score=208, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6323021, Length=360, Percent_Identity=35, Blast_Score=206, Evalue=7e-54, Organism=Saccharomyces cerevisiae, GI6320041, Length=370, Percent_Identity=32.4324324324324, Blast_Score=205, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6320173, Length=423, Percent_Identity=29.0780141843972, Blast_Score=201, Evalue=3e-52, Organism=Saccharomyces cerevisiae, GI6320449, Length=365, Percent_Identity=35.3424657534247, Blast_Score=197, Evalue=3e-51, Organism=Saccharomyces cerevisiae, GI6322912, Length=354, Percent_Identity=33.3333333333333, Blast_Score=184, Evalue=4e-47, Organism=Saccharomyces cerevisiae, GI6322323, Length=354, Percent_Identity=33.3333333333333, Blast_Score=184, Evalue=4e-47, Organism=Saccharomyces cerevisiae, GI6324620, Length=381, Percent_Identity=32.5459317585302, Blast_Score=180, Evalue=6e-46, Organism=Saccharomyces cerevisiae, GI6320119, Length=361, Percent_Identity=29.9168975069252, Blast_Score=177, Evalue=5e-45, Organism=Saccharomyces cerevisiae, GI6322427, Length=362, Percent_Identity=30.3867403314917, Blast_Score=172, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6319714, Length=370, Percent_Identity=29.4594594594595, Blast_Score=169, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6320400, Length=359, Percent_Identity=30.3621169916435, Blast_Score=164, Evalue=3e-41, Organism=Saccharomyces cerevisiae, GI6321963, Length=395, Percent_Identity=31.3924050632911, Blast_Score=163, Evalue=7e-41, Organism=Saccharomyces cerevisiae, GI6323947, Length=369, Percent_Identity=30.3523035230352, Blast_Score=162, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6321111, Length=357, Percent_Identity=31.9327731092437, Blast_Score=155, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6321267, Length=345, Percent_Identity=32.7536231884058, Blast_Score=152, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6319618, Length=404, Percent_Identity=26.4851485148515, Blast_Score=143, Evalue=8e-35, Organism=Saccharomyces cerevisiae, GI6323306, Length=319, Percent_Identity=27.2727272727273, Blast_Score=120, Evalue=4e-28, Organism=Saccharomyces cerevisiae, GI6324366, Length=352, Percent_Identity=25.5681818181818, Blast_Score=110, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6322876, Length=218, Percent_Identity=30.7339449541284, Blast_Score=91, Evalue=4e-19, Organism=Saccharomyces cerevisiae, GI6321374, Length=389, Percent_Identity=23.9074550128535, Blast_Score=84, Evalue=5e-17, Organism=Drosophila melanogaster, GI28574962, Length=358, Percent_Identity=37.1508379888268, Blast_Score=244, Evalue=8e-65, Organism=Drosophila melanogaster, GI24662330, Length=355, Percent_Identity=36.3380281690141, Blast_Score=231, Evalue=9e-61, Organism=Drosophila melanogaster, GI24644479, Length=358, Percent_Identity=34.9162011173184, Blast_Score=230, Evalue=1e-60, Organism=Drosophila melanogaster, GI24584399, Length=357, Percent_Identity=38.0952380952381, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI21355075, Length=352, Percent_Identity=36.0795454545455, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI281361218, Length=358, Percent_Identity=34.9162011173184, Blast_Score=229, Evalue=2e-60, Organism=Drosophila melanogaster, GI24644481, Length=358, Percent_Identity=34.9162011173184, Blast_Score=229, Evalue=2e-60, Organism=Drosophila melanogaster, GI24644487, Length=358, Percent_Identity=34.9162011173184, Blast_Score=229, Evalue=2e-60, Organism=Drosophila melanogaster, GI45551833, Length=358, Percent_Identity=34.9162011173184, Blast_Score=229, Evalue=2e-60, Organism=Drosophila melanogaster, GI24644485, Length=358, Percent_Identity=34.9162011173184, Blast_Score=229, Evalue=2e-60, Organism=Drosophila melanogaster, GI24644483, Length=358, Percent_Identity=34.9162011173184, Blast_Score=229, Evalue=3e-60, Organism=Drosophila melanogaster, GI18857967, Length=489, Percent_Identity=30.879345603272, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24584994, Length=387, Percent_Identity=35.1421188630491, Blast_Score=222, Evalue=5e-58, Organism=Drosophila melanogaster, GI17985987, Length=382, Percent_Identity=36.1256544502618, Blast_Score=218, Evalue=1e-56, Organism=Drosophila melanogaster, GI17977678, Length=361, Percent_Identity=36.5650969529086, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI24642151, Length=365, Percent_Identity=34.2465753424658, Blast_Score=214, Evalue=2e-55, Organism=Drosophila melanogaster, GI21356161, Length=362, Percent_Identity=35.0828729281768, Blast_Score=209, Evalue=3e-54, Organism=Drosophila melanogaster, GI24645031, Length=361, Percent_Identity=34.0720221606648, Blast_Score=208, Evalue=7e-54, Organism=Drosophila melanogaster, GI28575014, Length=378, Percent_Identity=32.2751322751323, Blast_Score=208, Evalue=9e-54, Organism=Drosophila melanogaster, GI24585582, Length=372, Percent_Identity=31.989247311828, Blast_Score=196, Evalue=3e-50, Organism=Drosophila melanogaster, GI281365720, Length=318, Percent_Identity=34.9056603773585, Blast_Score=193, Evalue=2e-49, Organism=Drosophila melanogaster, GI24583281, Length=402, Percent_Identity=29.6019900497512, Blast_Score=191, Evalue=8e-49, Organism=Drosophila melanogaster, GI24583279, Length=402, Percent_Identity=29.6019900497512, Blast_Score=191, Evalue=8e-49, Organism=Drosophila melanogaster, GI24582080, Length=359, Percent_Identity=33.4261838440111, Blast_Score=191, Evalue=2e-48, Organism=Drosophila melanogaster, GI24582078, Length=359, Percent_Identity=33.4261838440111, Blast_Score=191, Evalue=2e-48, Organism=Drosophila melanogaster, GI17136248, Length=359, Percent_Identity=33.4261838440111, Blast_Score=191, Evalue=2e-48, Organism=Drosophila melanogaster, GI24582075, Length=359, Percent_Identity=33.4261838440111, Blast_Score=191, Evalue=2e-48, Organism=Drosophila melanogaster, GI17136814, Length=361, Percent_Identity=32.9639889196676, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI24581954, Length=355, Percent_Identity=30.4225352112676, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI24581952, Length=355, Percent_Identity=30.4225352112676, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI24581956, Length=355, Percent_Identity=30.4225352112676, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI20130173, Length=470, Percent_Identity=30.2127659574468, Blast_Score=176, Evalue=4e-44, Organism=Drosophila melanogaster, GI28571808, Length=374, Percent_Identity=31.5508021390374, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI28571809, Length=374, Percent_Identity=31.5508021390374, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI24643725, Length=402, Percent_Identity=27.363184079602, Blast_Score=162, Evalue=4e-40, Organism=Drosophila melanogaster, GI17647335, Length=363, Percent_Identity=28.6501377410468, Blast_Score=152, Evalue=6e-37, Organism=Drosophila melanogaster, GI24642822, Length=373, Percent_Identity=29.4906166219839, Blast_Score=151, Evalue=1e-36, Organism=Drosophila melanogaster, GI21355559, Length=361, Percent_Identity=32.409972299169, Blast_Score=148, Evalue=7e-36, Organism=Drosophila melanogaster, GI24666101, Length=370, Percent_Identity=28.9189189189189, Blast_Score=139, Evalue=5e-33, Organism=Drosophila melanogaster, GI24668515, Length=328, Percent_Identity=30.1829268292683, Blast_Score=132, Evalue=5e-31, Organism=Drosophila melanogaster, GI17136666, Length=437, Percent_Identity=26.5446224256293, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI19920478, Length=350, Percent_Identity=28.5714285714286, Blast_Score=121, Evalue=9e-28, Organism=Drosophila melanogaster, GI28571338, Length=231, Percent_Identity=30.3030303030303, Blast_Score=102, Evalue=6e-22, Organism=Drosophila melanogaster, GI18859659, Length=231, Percent_Identity=30.3030303030303, Blast_Score=102, Evalue=6e-22, Organism=Drosophila melanogaster, GI24640164, Length=355, Percent_Identity=25.3521126760563, Blast_Score=96, Evalue=6e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 54871; Mature: 54739
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLTTSVDMTFASLGVRDEICRALAEEGIHQPFAIQELTLPMALAGDDLIGQARTGMGK CCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHCCCHHHCCCHHHHHHHCCCCC TYAFGVPLLQRVTTDTEKELSGIPRALIVVPTRELCLQVHSDLSLAAKYLTAGDRKLSVV EEECCHHHHHHHHCCHHHHHHCCCEEEEEECCHHHHHHHHCCHHHHHHHHHCCCCEEEEE SIYGGRPYEPQIESLRKGADVVVGTPGRLLDLAQQGHLQLGGLSVLVLDEADEMLDLGFL EEECCCCCCHHHHHHHCCCCEEEECCHHHHHHHHCCCEEECCEEEEEECCCHHHHHCCCC PDIERILRQTPDTRQAMLFSATMPDPIITLARTFMNQPTHIRAESPQSSATHDTTAQFAY CHHHHHHHCCCCHHHEEEEECCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHH RAHALDKVEMVSRILQAEGRGATMIFTRTKRTAQKVADELAERGFKVGAVHGDLGQGARE HHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHH KALKSFRTGEVDVLVATDVAARGIDIDDITHVINFQIPEDEQAYVHRIGRTGRAGKTGVA HHHHHHCCCCEEEEEECCHHHCCCCHHHHHHHEEECCCCCHHHHHHHHCCCCCCCCCCEE VTLVDWDELPRWSMIDKALGLNTPDPAETYSSSPHLYEELGIPTEAGGSVGEPKARAAAK EEEEEHHHCCCHHHHHHHHCCCCCCHHHHCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHH RSERPARGERDGDRDGDDKPARSRSRNRRRTRAGKPVTGHVEGSAEQPAVEAADGNGDGD HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCEECCCCCCCCC TEAGGESGQAGRRRRRRRPRKAAPATS CCCCCCCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TPLTTSVDMTFASLGVRDEICRALAEEGIHQPFAIQELTLPMALAGDDLIGQARTGMGK CCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHCCCHHHCCCHHHHHHHCCCCC TYAFGVPLLQRVTTDTEKELSGIPRALIVVPTRELCLQVHSDLSLAAKYLTAGDRKLSVV EEECCHHHHHHHHCCHHHHHHCCCEEEEEECCHHHHHHHHCCHHHHHHHHHCCCCEEEEE SIYGGRPYEPQIESLRKGADVVVGTPGRLLDLAQQGHLQLGGLSVLVLDEADEMLDLGFL EEECCCCCCHHHHHHHCCCCEEEECCHHHHHHHHCCCEEECCEEEEEECCCHHHHHCCCC PDIERILRQTPDTRQAMLFSATMPDPIITLARTFMNQPTHIRAESPQSSATHDTTAQFAY CHHHHHHHCCCCHHHEEEEECCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHH RAHALDKVEMVSRILQAEGRGATMIFTRTKRTAQKVADELAERGFKVGAVHGDLGQGARE HHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHH KALKSFRTGEVDVLVATDVAARGIDIDDITHVINFQIPEDEQAYVHRIGRTGRAGKTGVA HHHHHHCCCCEEEEEECCHHHCCCCHHHHHHHEEECCCCCHHHHHHHHCCCCCCCCCCEE VTLVDWDELPRWSMIDKALGLNTPDPAETYSSSPHLYEELGIPTEAGGSVGEPKARAAAK EEEEEHHHCCCHHHHHHHHCCCCCCHHHHCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHH RSERPARGERDGDRDGDDKPARSRSRNRRRTRAGKPVTGHVEGSAEQPAVEAADGNGDGD HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCEECCCCCCCCC TEAGGESGQAGRRRRRRRPRKAAPATS CCCCCCCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA