| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119867364
Identifier: 119867364
GI number: 119867364
Start: 1406264
End: 1406953
Strand: Reverse
Name: 119867364
Synonym: Mkms_1314
Alternate gene names: NA
Gene position: 1406953-1406264 (Counterclockwise)
Preceding gene: 119867368
Following gene: 119867361
Centisome position: 24.52
GC content: 65.36
Gene sequence:
>690_bases GTGTCTTTCGCCGATGCGACGATCAAGCGACTGCCGGGGCCCATCCGGCCGTACGCCGAGCAGCACCATGAGCTGATCAA GTTCGCCATCGTCGGCGCGACCACGTTCGTCATCGACTCGGCCATCTTCTTCACGCTCAAGCTGACGATTCTCGAGCCCA AGCCGGTGACGGCGAAGATCATCGCCGGCATCGTCGCGGTGATCGCCTCCTACATCCTCAATCGGGAGTGGAGCTTCCGC GACCGCGGTGGACGTGAGCGACATCACGAGGCGCTGTTGTTCTTCGGGTTCAGCGGTGTCGGCGTCCTGCTGAGCATGCT TCCGCTGTACTTCTCGAGCTACGTGCTGGGGCTGCGCGTCCCCGAGGTGTCGCTGACGATCGAGAACATCGCCGACTTCG TCTCCGCCTACATCCTGGGCAATCTCCTGCAGATGGCCTTCCGGTTCTGGGCGTTCCGGCGGTGGGTGTTCCCCGAGGAG TTCGGCCGCAACCCGGACAAGGCGCTGGAGTCCACCCTCACCATCGGTGGTATCGCCGAGGCGATGGAGGATGCCGCCGA GCACCACACCGCCCCGCATGGCGATGCGCCCGTCGAGGGCACGGTCACCCCGTTACGGCGGTCCCGCCGGCGGTCCGGCC TCGATCAGCTCGGTGACTCTTCGGACCCCAGGGTGTCGAAGACCTCGTGA
Upstream 100 bases:
>100_bases TATCGTGTCATGGCCCGGGTGGGGCGCATTGACCAGGAACGAAGCAGCGATACGGCTGCGATACGACAGGGGCCCCCTCG GTTCCGTAGACTTCTTCCTT
Downstream 100 bases:
>100_bases TAGAGCAGCGCGTGGACGTGTTCCACGCGGGGGATGTCGTGGAACTCGAGTGGGTCCTGCGCCGCTGACTCGATGACGAG CGTTCCGGTGCGCAGGATCC
Product: GtrA family protein
Products: NA
Alternate protein names: Transmembrane Protein; GtrA-Like Protein; Gtra-Like Protein; Conserved Membrane Protein
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MSFADATIKRLPGPIRPYAEQHHELIKFAIVGATTFVIDSAIFFTLKLTILEPKPVTAKIIAGIVAVIASYILNREWSFR DRGGRERHHEALLFFGFSGVGVLLSMLPLYFSSYVLGLRVPEVSLTIENIADFVSAYILGNLLQMAFRFWAFRRWVFPEE FGRNPDKALESTLTIGGIAEAMEDAAEHHTAPHGDAPVEGTVTPLRRSRRRSGLDQLGDSSDPRVSKTS
Sequences:
>Translated_229_residues MSFADATIKRLPGPIRPYAEQHHELIKFAIVGATTFVIDSAIFFTLKLTILEPKPVTAKIIAGIVAVIASYILNREWSFR DRGGRERHHEALLFFGFSGVGVLLSMLPLYFSSYVLGLRVPEVSLTIENIADFVSAYILGNLLQMAFRFWAFRRWVFPEE FGRNPDKALESTLTIGGIAEAMEDAAEHHTAPHGDAPVEGTVTPLRRSRRRSGLDQLGDSSDPRVSKTS >Mature_228_residues SFADATIKRLPGPIRPYAEQHHELIKFAIVGATTFVIDSAIFFTLKLTILEPKPVTAKIIAGIVAVIASYILNREWSFRD RGGRERHHEALLFFGFSGVGVLLSMLPLYFSSYVLGLRVPEVSLTIENIADFVSAYILGNLLQMAFRFWAFRRWVFPEEF GRNPDKALESTLTIGGIAEAMEDAAEHHTAPHGDAPVEGTVTPLRRSRRRSGLDQLGDSSDPRVSKTS
Specific function: Unknown
COG id: COG2246
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25474; Mature: 25342
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFADATIKRLPGPIRPYAEQHHELIKFAIVGATTFVIDSAIFFTLKLTILEPKPVTAKI CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHH IAGIVAVIASYILNREWSFRDRGGRERHHEALLFFGFSGVGVLLSMLPLYFSSYVLGLRV HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHEEC PEVSLTIENIADFVSAYILGNLLQMAFRFWAFRRWVFPEEFGRNPDKALESTLTIGGIAE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHH AMEDAAEHHTAPHGDAPVEGTVTPLRRSRRRSGLDQLGDSSDPRVSKTS HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCC >Mature Secondary Structure SFADATIKRLPGPIRPYAEQHHELIKFAIVGATTFVIDSAIFFTLKLTILEPKPVTAKI CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHH IAGIVAVIASYILNREWSFRDRGGRERHHEALLFFGFSGVGVLLSMLPLYFSSYVLGLRV HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHEEC PEVSLTIENIADFVSAYILGNLLQMAFRFWAFRRWVFPEEFGRNPDKALESTLTIGGIAE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHH AMEDAAEHHTAPHGDAPVEGTVTPLRRSRRRSGLDQLGDSSDPRVSKTS HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA