Click here to switch to the map view.

The map label for this gene is 119867346

Identifier: 119867346

GI number: 119867346

Start: 1391227

End: 1392246

Strand: Reverse

Name: 119867346

Synonym: Mkms_1296

Alternate gene names: NA

Gene position: 1392246-1391227 (Counterclockwise)

Preceding gene: 119867349

Following gene: 119867344

Centisome position: 24.27

GC content: 67.35

Gene sequence:

>1020_bases
ATGCGACTTCGGCGCAGCGTAGTCAGCGGCCCCGGCCTGACCCGGGTGCGCCGCGGCAAGGGCTTCTCGTACCGCGATGC
GAACGGCGACGCCGTCACCGACAAGAAGACGATCGACCGCATCAACTCCCTGGTGATCCCGCCGGCATGGAAGAAGGTGT
GGATCTGCCCGTACCCCAACGGGCACATCCAGGCCGTCGGCACCGACGCCGCCGGACGGCGTCAGTACCTCTACCACCAG
AAGTGGCAGGAGGAACGCAACGAGGAGAAGTTCGACCGGGTGCTGCAGATGTCGTCCGCACTGCCCGAGATGCGTCGGCA
GATCGCCGCGGATCTGGGCGGCCGGGGCTGGCAGCGCAACCGGGTGCTGGCGCTGGCGCTGCACCTGCTCGATCTCGGCT
ACTTCCGCGCCGGCGGCGATCAGTACGCCGAGGAGAACAACTCGTTCGGCATCGCGACGCTGCTGTGCGAACACGTCAAG
CTGCAGCGCCAGGCCGTGGAGTTCGACTATCCCGCCAAGAGCGGTGTCCAGCGCAGCCTGGTGATCGACGATCCTGAGGT
GGTGAAGTCGGTGCGGGCGCTGCTGCGCCATCCGGATCGACCGGACCGCCTGCTGGCGTGCCGAAATGGCGACGGGTGGG
CCGAGATCCGCTCCGATGACCTCAACACCCGGTTCAAGGAGTTGGTGGGCGAGGACTACTCGGTGAAGGATCTGCGCACC
TGGCACGGCACCGTACTGGCGGCCGTCGCGTTCGTCGATGCCGACCCGCCGGTCAACAAGACGGTGATCAAACGCGTGGA
GTCCGCGGTGATGAAAGAGGTGTCAGGTTCGCTCGGCAACACCCCCGCGGTGGCGCGGACCTCCTATGTGGACCCGCGGG
TGGTCAGCGCCTACGAATCGGGGGCAACCATCGCCGCCGCCGAACGCCGGGCACTACGTGCCAAACGTCCCGACGAACGT
CAGCTGATCCGCGAGCGGGCCACCGCGAAGCTGATCCGGCGGGCCGCCAAAAGTCGGTAG

Upstream 100 bases:

>100_bases
CTTTCTCGCGCGCGCCGACCTCGTGCTCACCATGGTGTGCCTTCCATACCCCGGCGACCGCGGTTGCCAAACCCGTAACC
CCCATCACAGGTAGGTGTCG

Downstream 100 bases:

>100_bases
TCGAGATCGACCCGTGCCGTCGACGACGGTGCCATGGACCGCGGGATTAGCGTTGCCCCAACATGATTCGGCCCACGGGT
CCGCTGACGCCCTCATACTG

Product: hypothetical protein

Products: NA

Alternate protein names: DNA poisomerase I; DNA poisomerase Type I; DNA poisomerase IB; Type I poisomerase; DNA poisomerase I Protein; Poisomerase IB; Poisomerase IB-Like Protein; DNA poisomerase I-Like Protein; Viral-Like DNA poisomerase; DNA poisomerasei; -Like DNA poisomerase I; DNA poisomerase ; Type I DNA poisomerase; Eukaryotic-Like DNA poisomerase I

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MRLRRSVVSGPGLTRVRRGKGFSYRDANGDAVTDKKTIDRINSLVIPPAWKKVWICPYPNGHIQAVGTDAAGRRQYLYHQ
KWQEERNEEKFDRVLQMSSALPEMRRQIAADLGGRGWQRNRVLALALHLLDLGYFRAGGDQYAEENNSFGIATLLCEHVK
LQRQAVEFDYPAKSGVQRSLVIDDPEVVKSVRALLRHPDRPDRLLACRNGDGWAEIRSDDLNTRFKELVGEDYSVKDLRT
WHGTVLAAVAFVDADPPVNKTVIKRVESAVMKEVSGSLGNTPAVARTSYVDPRVVSAYESGATIAAAERRALRAKRPDER
QLIRERATAKLIRRAAKSR

Sequences:

>Translated_339_residues
MRLRRSVVSGPGLTRVRRGKGFSYRDANGDAVTDKKTIDRINSLVIPPAWKKVWICPYPNGHIQAVGTDAAGRRQYLYHQ
KWQEERNEEKFDRVLQMSSALPEMRRQIAADLGGRGWQRNRVLALALHLLDLGYFRAGGDQYAEENNSFGIATLLCEHVK
LQRQAVEFDYPAKSGVQRSLVIDDPEVVKSVRALLRHPDRPDRLLACRNGDGWAEIRSDDLNTRFKELVGEDYSVKDLRT
WHGTVLAAVAFVDADPPVNKTVIKRVESAVMKEVSGSLGNTPAVARTSYVDPRVVSAYESGATIAAAERRALRAKRPDER
QLIRERATAKLIRRAAKSR
>Mature_339_residues
MRLRRSVVSGPGLTRVRRGKGFSYRDANGDAVTDKKTIDRINSLVIPPAWKKVWICPYPNGHIQAVGTDAAGRRQYLYHQ
KWQEERNEEKFDRVLQMSSALPEMRRQIAADLGGRGWQRNRVLALALHLLDLGYFRAGGDQYAEENNSFGIATLLCEHVK
LQRQAVEFDYPAKSGVQRSLVIDDPEVVKSVRALLRHPDRPDRLLACRNGDGWAEIRSDDLNTRFKELVGEDYSVKDLRT
WHGTVLAAVAFVDADPPVNKTVIKRVESAVMKEVSGSLGNTPAVARTSYVDPRVVSAYESGATIAAAERRALRAKRPDER
QLIRERATAKLIRRAAKSR

Specific function: Unknown

COG id: COG3569

COG function: function code L; Topoisomerase IB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38153; Mature: 38153

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRRSVVSGPGLTRVRRGKGFSYRDANGDAVTDKKTIDRINSLVIPPAWKKVWICPYPN
CCCHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCC
GHIQAVGTDAAGRRQYLYHQKWQEERNEEKFDRVLQMSSALPEMRRQIAADLGGRGWQRN
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
RVLALALHLLDLGYFRAGGDQYAEENNSFGIATLLCEHVKLQRQAVEFDYPAKSGVQRSL
HHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCCEE
VIDDPEVVKSVRALLRHPDRPDRLLACRNGDGWAEIRSDDLNTRFKELVGEDYSVKDLRT
EECCHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHCCCCHHHHHHHHHHCCCCCHHHHHH
WHGTVLAAVAFVDADPPVNKTVIKRVESAVMKEVSGSLGNTPAVARTSYVDPRVVSAYES
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHECCCCCCHHHHHHHC
GATIAAAERRALRAKRPDERQLIRERATAKLIRRAAKSR
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLRRSVVSGPGLTRVRRGKGFSYRDANGDAVTDKKTIDRINSLVIPPAWKKVWICPYPN
CCCHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCC
GHIQAVGTDAAGRRQYLYHQKWQEERNEEKFDRVLQMSSALPEMRRQIAADLGGRGWQRN
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
RVLALALHLLDLGYFRAGGDQYAEENNSFGIATLLCEHVKLQRQAVEFDYPAKSGVQRSL
HHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCCEE
VIDDPEVVKSVRALLRHPDRPDRLLACRNGDGWAEIRSDDLNTRFKELVGEDYSVKDLRT
EECCHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHCCCCHHHHHHHHHHCCCCCHHHHHH
WHGTVLAAVAFVDADPPVNKTVIKRVESAVMKEVSGSLGNTPAVARTSYVDPRVVSAYES
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHECCCCCCHHHHHHHC
GATIAAAERRALRAKRPDERQLIRERATAKLIRRAAKSR
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA