| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is ygjG [C]
Identifier: 119867285
GI number: 119867285
Start: 1321753
End: 1323138
Strand: Reverse
Name: ygjG [C]
Synonym: Mkms_1235
Alternate gene names: 119867285
Gene position: 1323138-1321753 (Counterclockwise)
Preceding gene: 119867286
Following gene: 119867284
Centisome position: 23.06
GC content: 66.88
Gene sequence:
>1386_bases ATGACGCAGTCCTATATCACCGAGCCCGTCACGAGCGAACTCGGGGCGAAAGCCAACCGGCACCTGTGGGGGCATTTCGC CCGCCACGGCGAAGGCATCACCCCGCCGATCATCACCCGCGGCGAGGGCGTGCGCATCTGGGATGACAAGGGCCGCAGCT ACATCGACGGACTGTCCGGGTTGTTCGTCGTCCAGGTCGGCCACGGCCGCAAGGAACTCGCCGAGGCCGCGGCCAAACAG GCCGAGACGCTGTCGTTCTTCCCGCTGTGGTCCTACGCCACCCCGCCCGCGATCGAACTCGCCGAGCGCATCGCCAATTA CGCACCCGGCGACCTGAACCGCGTGTTCTTCACCACCGGTGGCGGCGAGGCGGTCGAGAGCGCGTGGAAGCTGGCCAAGC AATACTTCAAGCTGACCGGGAAACCCGGTAAGCACAAGGTGGTTTCGCGCGCGATCGCCTATCACGGCACCCCGCAAGGC GCCTTGGCGATCACGGGCATCCCGGCGTTCAAGGCGCCGTTCGAACCGCTCACCCCCGGTGGGTTCCGCGCGCCGAACAC GAACTTCTACCGTGCGCCGGAACCGTATGCGCACGACGTCAAGGCATTCGGGCAGTACTGCGCGGACCGCATCGCCGAGG CCATCGAGTTCGAGGGGCCCGACACCGTTGCGGCCGTCTTCCTCGAGCCGGTACAGAACGCGGGTGGCTGTTTCCCGCCT CCCCCAGGCTATTTCGAGCGGGTCCGCGAGATCTGCGACGAGTACGACGTGTTGCTGGTGTCCGACGAGGTGATCTGCGC CTACGGCCGCATCGGGTCGATGTTCGCCTGCGACGACTTCGGTTACGTGCCGGACATCATCACCAGCGCCAAGGGTCTGA CCTCGGGCTACTCCCCGCTCGGCGCGATGATCGCCAGCGACCGGCTGTTCGAACCGTTCAACGACGGTAAGACGACCTTC GGGCACGGCTACACCTTCGGCGGGCATCCGGTGTCGGCGGCGGTGGCGCTGGCCAACCTCGACATCTTCGAGCGCGAAGG CCTCAACGACCACGTCAAGGAGAACGCCCCGGCGTTCCGGGCGACGCTGGAGAAGCTCTACGACCTGCCGATCGTCGGCG ACGTCCGCGGCGAGGGCTTCTTCTACGGCATCGAACTGGTCAAGGACAAGGCCACCAAGGAGACCTTCGACGACGACGAG TCGGAGCGGCTGCTGCGCGGGTTCCTGACCCCTGCCCTGTGGGAGGCCGGACTGTACTGCCGCGCCGATGACCGTGGCGA CCCAGTGGTGCAGCTGGCGCCGCCACTGATCAGCGGCCAGGCCGAGTTCGATGCGATCTACGAGATCCTGCACGGCGTGC TCAGCGAGGCCGCGCGCCGGCTCTGA
Upstream 100 bases:
>100_bases ACCTGTTGAACACGAAGATCCGCGCGCTGCCGGGAGTGGTATCCACGGAGACGTTGGTATATCTCAAACTGGTTAAGCAG CAATATAATTGGGGAACACG
Downstream 100 bases:
>100_bases CGTTCTTGCGCCGAGGCTGCTGGGAGATCGCCGTTTCGCGCAATACCGTGATCTGGCAGCAGGCTCGGCGCATCGCCGCG TAGCGTCGGCGACGTGGCCT
Product: hypothetical protein
Products: L-Glutamate; L-Glutamate 5-semialdehyde [C]
Alternate protein names: NA
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MTQSYITEPVTSELGAKANRHLWGHFARHGEGITPPIITRGEGVRIWDDKGRSYIDGLSGLFVVQVGHGRKELAEAAAKQ AETLSFFPLWSYATPPAIELAERIANYAPGDLNRVFFTTGGGEAVESAWKLAKQYFKLTGKPGKHKVVSRAIAYHGTPQG ALAITGIPAFKAPFEPLTPGGFRAPNTNFYRAPEPYAHDVKAFGQYCADRIAEAIEFEGPDTVAAVFLEPVQNAGGCFPP PPGYFERVREICDEYDVLLVSDEVICAYGRIGSMFACDDFGYVPDIITSAKGLTSGYSPLGAMIASDRLFEPFNDGKTTF GHGYTFGGHPVSAAVALANLDIFEREGLNDHVKENAPAFRATLEKLYDLPIVGDVRGEGFFYGIELVKDKATKETFDDDE SERLLRGFLTPALWEAGLYCRADDRGDPVVQLAPPLISGQAEFDAIYEILHGVLSEAARRL
Sequences:
>Translated_461_residues MTQSYITEPVTSELGAKANRHLWGHFARHGEGITPPIITRGEGVRIWDDKGRSYIDGLSGLFVVQVGHGRKELAEAAAKQ AETLSFFPLWSYATPPAIELAERIANYAPGDLNRVFFTTGGGEAVESAWKLAKQYFKLTGKPGKHKVVSRAIAYHGTPQG ALAITGIPAFKAPFEPLTPGGFRAPNTNFYRAPEPYAHDVKAFGQYCADRIAEAIEFEGPDTVAAVFLEPVQNAGGCFPP PPGYFERVREICDEYDVLLVSDEVICAYGRIGSMFACDDFGYVPDIITSAKGLTSGYSPLGAMIASDRLFEPFNDGKTTF GHGYTFGGHPVSAAVALANLDIFEREGLNDHVKENAPAFRATLEKLYDLPIVGDVRGEGFFYGIELVKDKATKETFDDDE SERLLRGFLTPALWEAGLYCRADDRGDPVVQLAPPLISGQAEFDAIYEILHGVLSEAARRL >Mature_460_residues TQSYITEPVTSELGAKANRHLWGHFARHGEGITPPIITRGEGVRIWDDKGRSYIDGLSGLFVVQVGHGRKELAEAAAKQA ETLSFFPLWSYATPPAIELAERIANYAPGDLNRVFFTTGGGEAVESAWKLAKQYFKLTGKPGKHKVVSRAIAYHGTPQGA LAITGIPAFKAPFEPLTPGGFRAPNTNFYRAPEPYAHDVKAFGQYCADRIAEAIEFEGPDTVAAVFLEPVQNAGGCFPPP PGYFERVREICDEYDVLLVSDEVICAYGRIGSMFACDDFGYVPDIITSAKGLTSGYSPLGAMIASDRLFEPFNDGKTTFG HGYTFGGHPVSAAVALANLDIFEREGLNDHVKENAPAFRATLEKLYDLPIVGDVRGEGFFYGIELVKDKATKETFDDDES ERLLRGFLTPALWEAGLYCRADDRGDPVVQLAPPLISGQAEFDAIYEILHGVLSEAARRL
Specific function: Unknown
COG id: COG0161
COG function: function code H; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI24119277, Length=443, Percent_Identity=28.8939051918736, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI37574042, Length=429, Percent_Identity=28.6713286713287, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI4557809, Length=433, Percent_Identity=28.4064665127021, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI13994255, Length=447, Percent_Identity=25.7270693512304, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI226442705, Length=429, Percent_Identity=28.4382284382284, Blast_Score=142, Evalue=6e-34, Organism=Homo sapiens, GI226442709, Length=398, Percent_Identity=28.643216080402, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI284507298, Length=336, Percent_Identity=29.4642857142857, Blast_Score=115, Evalue=6e-26, Organism=Escherichia coli, GI145693181, Length=351, Percent_Identity=35.8974358974359, Blast_Score=187, Evalue=1e-48, Organism=Escherichia coli, GI1789759, Length=417, Percent_Identity=31.1750599520384, Blast_Score=172, Evalue=3e-44, Organism=Escherichia coli, GI1789016, Length=366, Percent_Identity=32.5136612021858, Blast_Score=167, Evalue=1e-42, Organism=Escherichia coli, GI1788044, Length=372, Percent_Identity=31.1827956989247, Blast_Score=161, Evalue=8e-41, Organism=Escherichia coli, GI1786991, Length=373, Percent_Identity=28.9544235924933, Blast_Score=145, Evalue=4e-36, Organism=Escherichia coli, GI1787560, Length=426, Percent_Identity=30.2816901408451, Blast_Score=138, Evalue=6e-34, Organism=Escherichia coli, GI1786349, Length=417, Percent_Identity=26.1390887290168, Blast_Score=96, Evalue=5e-21, Organism=Caenorhabditis elegans, GI32564660, Length=444, Percent_Identity=28.8288288288288, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI25144271, Length=439, Percent_Identity=28.7015945330296, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI71992977, Length=443, Percent_Identity=26.1851015801354, Blast_Score=131, Evalue=8e-31, Organism=Caenorhabditis elegans, GI25144274, Length=241, Percent_Identity=31.1203319502075, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17541228, Length=445, Percent_Identity=22.4719101123595, Blast_Score=74, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6324432, Length=364, Percent_Identity=28.5714285714286, Blast_Score=147, Evalue=4e-36, Organism=Saccharomyces cerevisiae, GI6323470, Length=444, Percent_Identity=26.8018018018018, Blast_Score=146, Evalue=8e-36, Organism=Saccharomyces cerevisiae, GI6324386, Length=381, Percent_Identity=27.2965879265092, Blast_Score=115, Evalue=1e-26, Organism=Drosophila melanogaster, GI161085790, Length=391, Percent_Identity=28.9002557544757, Blast_Score=151, Evalue=1e-36, Organism=Drosophila melanogaster, GI28574759, Length=391, Percent_Identity=28.9002557544757, Blast_Score=151, Evalue=1e-36, Organism=Drosophila melanogaster, GI21356575, Length=445, Percent_Identity=28.0898876404494, Blast_Score=145, Evalue=8e-35, Organism=Drosophila melanogaster, GI21357415, Length=433, Percent_Identity=26.7898383371824, Blast_Score=136, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005814 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00202 Aminotran_3 [H]
EC number: 2.6.1.13 [C]
Molecular weight: Translated: 50286; Mature: 50155
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00600 AA_TRANSFER_CLASS_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQSYITEPVTSELGAKANRHLWGHFARHGEGITPPIITRGEGVRIWDDKGRSYIDGLSG CCCCHHCCHHHHHHCCHHCHHHHHHHHHCCCCCCCCEEECCCCEEEECCCCCHHHHCCCC LFVVQVGHGRKELAEAAAKQAETLSFFPLWSYATPPAIELAERIANYAPGDLNRVFFTTG EEEEEECCCHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEECC GGEAVESAWKLAKQYFKLTGKPGKHKVVSRAIAYHGTPQGALAITGIPAFKAPFEPLTPG CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCC GFRAPNTNFYRAPEPYAHDVKAFGQYCADRIAEAIEFEGPDTVAAVFLEPVQNAGGCFPP CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCC PPGYFERVREICDEYDVLLVSDEVICAYGRIGSMFACDDFGYVPDIITSAKGLTSGYSPL CCCHHHHHHHHHCCCCEEEECCCEEEECCCCCCEEEECCCCCHHHHHHHHCCCCCCCCHH GAMIASDRLFEPFNDGKTTFGHGYTFGGHPVSAAVALANLDIFEREGLNDHVKENAPAFR HHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHCCCCHHHHHCCHHHH ATLEKLYDLPIVGDVRGEGFFYGIELVKDKATKETFDDDESERLLRGFLTPALWEAGLYC HHHHHHHCCCCEECCCCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEE RADDRGDPVVQLAPPLISGQAEFDAIYEILHGVLSEAARRL EECCCCCCEEEECCCHHCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TQSYITEPVTSELGAKANRHLWGHFARHGEGITPPIITRGEGVRIWDDKGRSYIDGLSG CCCHHCCHHHHHHCCHHCHHHHHHHHHCCCCCCCCEEECCCCEEEECCCCCHHHHCCCC LFVVQVGHGRKELAEAAAKQAETLSFFPLWSYATPPAIELAERIANYAPGDLNRVFFTTG EEEEEECCCHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEECC GGEAVESAWKLAKQYFKLTGKPGKHKVVSRAIAYHGTPQGALAITGIPAFKAPFEPLTPG CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCC GFRAPNTNFYRAPEPYAHDVKAFGQYCADRIAEAIEFEGPDTVAAVFLEPVQNAGGCFPP CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCC PPGYFERVREICDEYDVLLVSDEVICAYGRIGSMFACDDFGYVPDIITSAKGLTSGYSPL CCCHHHHHHHHHCCCCEEEECCCEEEECCCCCCEEEECCCCCHHHHHHHHCCCCCCCCHH GAMIASDRLFEPFNDGKTTFGHGYTFGGHPVSAAVALANLDIFEREGLNDHVKENAPAFR HHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHCCCCHHHHHCCHHHH ATLEKLYDLPIVGDVRGEGFFYGIELVKDKATKETFDDDESERLLRGFLTPALWEAGLYC HHHHHHHCCCCEECCCCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEE RADDRGDPVVQLAPPLISGQAEFDAIYEILHGVLSEAARRL EECCCCCCEEEECCCHHCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: Pyridoxal Phosphate. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-Oxoglutarate; Ornithine [C]
Specific reaction: 2-Oxoglutarate + Ornithine --> L-Glutamate + L-Glutamate 5-semialdehyde [C]
General reaction: Amino group transfer [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8796346; 9163424 [H]