| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119867260
Identifier: 119867260
GI number: 119867260
Start: 1296677
End: 1297228
Strand: Direct
Name: 119867260
Synonym: Mkms_1210
Alternate gene names: NA
Gene position: 1296677-1297228 (Clockwise)
Preceding gene: 119867259
Following gene: 119867264
Centisome position: 22.6
GC content: 69.57
Gene sequence:
>552_bases ATGGCGGAGTGGAACGACGAGGAGTTCATCGGCCGGGACTTCCGTGACGAGGACCTGAGCCGGCTGCGCACCGAGCGGGT GGTGTTCGACGGCTGCGATTTCAGCGGTGTCGACATGTCGGAGTCCGAGCACGTCGGTTCCGCGTTCCGCAACTGCGTGT TCCGACGGGCGTCGCTGTGGCACAGCACATTCCGTAACTGCAGCATGCTGGGTTCGGTGTTCACCGAGTGCCGGCTGCGG CCACTGACGCTGGTCGAGGTGGACCTGACGCTCGCCGTGCTCGGCGGATGCGATCTGCGCAAGGTCGACCTGTCGGACTG CCGGCTGCGCGAAGCCGGCCTGGTCGGCGCGGATCTGCGCGAGGCGGTGCTGCAGCGTGCCGACCTGCGCGGCGCCCGCG TGCAGAACACCCGTTTCGAGGGTGCGGATCTACGCGGTGCGCGCATCGACGCGACGCTGTGGACCACCGCCGCGGTGCGC GGGGCGCGCATCGACATCGAGCAGGCACTGGCATACGCCGCCGCGCACGGCCTCGACGTGCACGGCGGGTGA
Upstream 100 bases:
>100_bases TGATCACCGTCGACGCCAGAAGCCGCGAGTCGGCCAAGGCCGCGCTCATCGCGATCACCGAATACTCCCTCAACAGCCTT TCGGCTCTGCCGGGTTGACG
Downstream 100 bases:
>100_bases CGGCGCCTTCGTCACCGGCGTCCTCCACCTCCGCGGCGCCCGCCGCCCGGCAGGCTGTTGTCCGGTCGGGCGCCCGGACC GCCGGGTCTGCCCAAGTCGC
Product: pentapeptide repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MAEWNDEEFIGRDFRDEDLSRLRTERVVFDGCDFSGVDMSESEHVGSAFRNCVFRRASLWHSTFRNCSMLGSVFTECRLR PLTLVEVDLTLAVLGGCDLRKVDLSDCRLREAGLVGADLREAVLQRADLRGARVQNTRFEGADLRGARIDATLWTTAAVR GARIDIEQALAYAAAHGLDVHGG
Sequences:
>Translated_183_residues MAEWNDEEFIGRDFRDEDLSRLRTERVVFDGCDFSGVDMSESEHVGSAFRNCVFRRASLWHSTFRNCSMLGSVFTECRLR PLTLVEVDLTLAVLGGCDLRKVDLSDCRLREAGLVGADLREAVLQRADLRGARVQNTRFEGADLRGARIDATLWTTAAVR GARIDIEQALAYAAAHGLDVHGG >Mature_182_residues AEWNDEEFIGRDFRDEDLSRLRTERVVFDGCDFSGVDMSESEHVGSAFRNCVFRRASLWHSTFRNCSMLGSVFTECRLRP LTLVEVDLTLAVLGGCDLRKVDLSDCRLREAGLVGADLREAVLQRADLRGARVQNTRFEGADLRGARIDATLWTTAAVRG ARIDIEQALAYAAAHGLDVHGG
Specific function: Unknown
COG id: COG1357
COG function: function code S; Uncharacterized low-complexity proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 7 pentapeptide repeat domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001646 [H]
Pfam domain/function: PF00805 Pentapeptide [H]
EC number: NA
Molecular weight: Translated: 20350; Mature: 20219
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEWNDEEFIGRDFRDEDLSRLRTERVVFDGCDFSGVDMSESEHVGSAFRNCVFRRASLW CCCCCCCHHHCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH HSTFRNCSMLGSVFTECRLRPLTLVEVDLTLAVLGGCDLRKVDLSDCRLREAGLVGADLR HHHHHHHHHHHHHHHHHCCCCEEEEEEHHEEHEECCCCEEEECHHHHHHHHCCCCCHHHH EAVLQRADLRGARVQNTRFEGADLRGARIDATLWTTAAVRGARIDIEQALAYAAAHGLDV HHHHHHHCCCCCEECCCCCCCCCCCCCEECHHHHHHHHHCCCEECHHHHHHHHHHCCCCC HGG CCC >Mature Secondary Structure AEWNDEEFIGRDFRDEDLSRLRTERVVFDGCDFSGVDMSESEHVGSAFRNCVFRRASLW CCCCCCHHHCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH HSTFRNCSMLGSVFTECRLRPLTLVEVDLTLAVLGGCDLRKVDLSDCRLREAGLVGADLR HHHHHHHHHHHHHHHHHCCCCEEEEEEHHEEHEECCCCEEEECHHHHHHHHCCCCCHHHH EAVLQRADLRGARVQNTRFEGADLRGARIDATLWTTAAVRGARIDIEQALAYAAAHGLDV HHHHHHHCCCCCEECCCCCCCCCCCCCEECHHHHHHHHHCCCEECHHHHHHHHHHCCCCC HGG CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]