| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is eccB4 [H]
Identifier: 119867191
GI number: 119867191
Start: 1224952
End: 1226325
Strand: Direct
Name: eccB4 [H]
Synonym: Mkms_1140
Alternate gene names: 119867191
Gene position: 1224952-1226325 (Clockwise)
Preceding gene: 119867188
Following gene: 119867194
Centisome position: 21.35
GC content: 75.18
Gene sequence:
>1374_bases ATGGGCCGACCGACCACCGGGCTGCACGTCAGCGGATACCGGTTCCTGATGCGCCGCATGGAACACGCACTGGTCCGCGC GGACGTCCGGATGCTCGACGATCCGCTGCGCGGCCAGTCGATCGCACTCGTCGCCGGTGCGGTGCTCGCGGCCATCGCGG TGGCCGGTTGCGCGATCCTGGCGGTGCTGCGCCCGCAGGGCGGCCTCGGCGATGCCCCGATCGTGATGGAGGCGCAGTCC GGCGCCCTCTACGTGCGGATCGCCGACACTCTGCATCCGGTGCCCAACCTCGCCTCGGCCCGCCTGGTGGTCGGCAACGC CGCGGAGCCCCGGACGGTCAGCGCCCGCGCGCTGGCCGAAGCGCGGCGCGGACCCCAGGTCGGCATCGCAGGCGCGCCGG CCGTGATCGGGCCGGTGCTGCCGCCGCAGGAGGCCGGGTGGACGGTGTGCGACCGCGCCGAATCGACGTCGGTGGCGGTC GGACCGCAACCGCCGGGCGTCCTCGCCGGGGATCGCGCCGTCCTGGTCACCGCACGGTCGGAAGGTCCGGCGGTCACCTA CCTGCTGCACGCCGGCCGGCGCTCCGCGGTCGACCTGCGCGACACCGCGGTCGTGCGGGCCCTGCGGCTGGACGGTGTGA CCCCGCGACCGGTCTCCCGTGCACTGCTCGACGCGCTGCCCGAGAACCCGCCGATCACCGCCCCGGCCGTGCCGCGCGCC GGCGGCCGGGGTGCCGTGGCAGGCCATCCGGTGGGTGAGGTCGTGCGCCTGCCGCGCGCCGACACCGCGGAGTACTACGT CGTGCTGGCCGACGGCGTCCAGCGCATCGGTGAGGTGACCGCCGACCTGATCCGGTTCACCGTCCGCCAACGCAGTCAAG ACATTCCCGCCGTCGCCCCCGATGCGGTGGCCGCGGCCGGCGCCGTGGCCCCGCTGCCGACCGCCACCCATCCCGATCGG GTGACCATCACCGAACCGACTGTGCTGTGCGCACATTGGGCGATGAACGGCCCGGACGTGACCACCACGCTCGTCGACAC CGCGCCGGCTGCCGCGGTCGTGGAGCTTGCGCAGGCCGACGGTGCCGGACCGAACGTGGACGGCGTGTCCCTTCCGCCGG GGCGCAGTGTCTACACCCGTCCGGTCGGCGTCACCGGCGGCGGGGGCGGCGCACAACCGCGCTATCTGGTGACGGACCTC GGTGTGCTGTTCGGGGTGCCCGACGACGACACCGCCCGCACGCTCGGCGTGGGGTCGTCGCCGGTGCCTGCGCCGTGGCC GGTGCTGGCCCGGCTGCCCCGCGGACCCGAACTGAGCCGTGCCGCAGCGTCAGTGACGCGCGACGCGGTCGGAGTGGCCG CGCCGGTGCGATGA
Upstream 100 bases:
>100_bases CTGCTGCGTCAACTGTATGCCCGAGCACCGACATGGCGGCCGGAAAATCGGCGTCAGGGAGGTGCGCGGAGCGCGGTTAC GCTCCCCCTCGGGGGTGGAT
Downstream 100 bases:
>100_bases GGCGCTCAGCGCGACGAGCACCGTGATCGCCACGCAGATCCCCGCTCCGGCCATGGCGACCCGGCGGGGCCGCCCGTCGT GCGGGACGTCGGCCGGTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: ESX conserved component B4; Type VII secretion system protein eccB4; T7SS protein eccB4 [H]
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MGRPTTGLHVSGYRFLMRRMEHALVRADVRMLDDPLRGQSIALVAGAVLAAIAVAGCAILAVLRPQGGLGDAPIVMEAQS GALYVRIADTLHPVPNLASARLVVGNAAEPRTVSARALAEARRGPQVGIAGAPAVIGPVLPPQEAGWTVCDRAESTSVAV GPQPPGVLAGDRAVLVTARSEGPAVTYLLHAGRRSAVDLRDTAVVRALRLDGVTPRPVSRALLDALPENPPITAPAVPRA GGRGAVAGHPVGEVVRLPRADTAEYYVVLADGVQRIGEVTADLIRFTVRQRSQDIPAVAPDAVAAAGAVAPLPTATHPDR VTITEPTVLCAHWAMNGPDVTTTLVDTAPAAAVVELAQADGAGPNVDGVSLPPGRSVYTRPVGVTGGGGGAQPRYLVTDL GVLFGVPDDDTARTLGVGSSPVPAPWPVLARLPRGPELSRAAASVTRDAVGVAAPVR
Sequences:
>Translated_457_residues MGRPTTGLHVSGYRFLMRRMEHALVRADVRMLDDPLRGQSIALVAGAVLAAIAVAGCAILAVLRPQGGLGDAPIVMEAQS GALYVRIADTLHPVPNLASARLVVGNAAEPRTVSARALAEARRGPQVGIAGAPAVIGPVLPPQEAGWTVCDRAESTSVAV GPQPPGVLAGDRAVLVTARSEGPAVTYLLHAGRRSAVDLRDTAVVRALRLDGVTPRPVSRALLDALPENPPITAPAVPRA GGRGAVAGHPVGEVVRLPRADTAEYYVVLADGVQRIGEVTADLIRFTVRQRSQDIPAVAPDAVAAAGAVAPLPTATHPDR VTITEPTVLCAHWAMNGPDVTTTLVDTAPAAAVVELAQADGAGPNVDGVSLPPGRSVYTRPVGVTGGGGGAQPRYLVTDL GVLFGVPDDDTARTLGVGSSPVPAPWPVLARLPRGPELSRAAASVTRDAVGVAAPVR >Mature_456_residues GRPTTGLHVSGYRFLMRRMEHALVRADVRMLDDPLRGQSIALVAGAVLAAIAVAGCAILAVLRPQGGLGDAPIVMEAQSG ALYVRIADTLHPVPNLASARLVVGNAAEPRTVSARALAEARRGPQVGIAGAPAVIGPVLPPQEAGWTVCDRAESTSVAVG PQPPGVLAGDRAVLVTARSEGPAVTYLLHAGRRSAVDLRDTAVVRALRLDGVTPRPVSRALLDALPENPPITAPAVPRAG GRGAVAGHPVGEVVRLPRADTAEYYVVLADGVQRIGEVTADLIRFTVRQRSQDIPAVAPDAVAAAGAVAPLPTATHPDRV TITEPTVLCAHWAMNGPDVTTTLVDTAPAAAVVELAQADGAGPNVDGVSLPPGRSVYTRPVGVTGGGGGAQPRYLVTDLG VLFGVPDDDTARTLGVGSSPVPAPWPVLARLPRGPELSRAAASVTRDAVGVAAPVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eccB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007795 [H]
Pfam domain/function: PF05108 DUF690 [H]
EC number: NA
Molecular weight: Translated: 46664; Mature: 46533
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRPTTGLHVSGYRFLMRRMEHALVRADVRMLDDPLRGQSIALVAGAVLAAIAVAGCAIL CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH AVLRPQGGLGDAPIVMEAQSGALYVRIADTLHPVPNLASARLVVGNAAEPRTVSARALAE HEECCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHH ARRGPQVGIAGAPAVIGPVLPPQEAGWTVCDRAESTSVAVGPQPPGVLAGDRAVLVTARS HHCCCCCCCCCCCHHHCCCCCCCCCCCCEECCCCCCEEEECCCCCCEECCCCEEEEEECC EGPAVTYLLHAGRRSAVDLRDTAVVRALRLDGVTPRPVSRALLDALPENPPITAPAVPRA CCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC GGRGAVAGHPVGEVVRLPRADTAEYYVVLADGVQRIGEVTADLIRFTVRQRSQDIPAVAP CCCCCCCCCCHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DAVAAAGAVAPLPTATHPDRVTITEPTVLCAHWAMNGPDVTTTLVDTAPAAAVVELAQAD HHHHHCCCCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHCC GAGPNVDGVSLPPGRSVYTRPVGVTGGGGGAQPRYLVTDLGVLFGVPDDDTARTLGVGSS CCCCCCCCCCCCCCCCEEECCCEECCCCCCCCCCEEEEECHHHCCCCCCCCCCEECCCCC PVPAPWPVLARLPRGPELSRAAASVTRDAVGVAAPVR CCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GRPTTGLHVSGYRFLMRRMEHALVRADVRMLDDPLRGQSIALVAGAVLAAIAVAGCAIL CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH AVLRPQGGLGDAPIVMEAQSGALYVRIADTLHPVPNLASARLVVGNAAEPRTVSARALAE HEECCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHH ARRGPQVGIAGAPAVIGPVLPPQEAGWTVCDRAESTSVAVGPQPPGVLAGDRAVLVTARS HHCCCCCCCCCCCHHHCCCCCCCCCCCCEECCCCCCEEEECCCCCCEECCCCEEEEEECC EGPAVTYLLHAGRRSAVDLRDTAVVRALRLDGVTPRPVSRALLDALPENPPITAPAVPRA CCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC GGRGAVAGHPVGEVVRLPRADTAEYYVVLADGVQRIGEVTADLIRFTVRQRSQDIPAVAP CCCCCCCCCCHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DAVAAAGAVAPLPTATHPDRVTITEPTVLCAHWAMNGPDVTTTLVDTAPAAAVVELAQAD HHHHHCCCCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHCC GAGPNVDGVSLPPGRSVYTRPVGVTGGGGGAQPRYLVTDLGVLFGVPDDDTARTLGVGSS CCCCCCCCCCCCCCCCEEECCCEECCCCCCCCCCEEEEECHHHCCCCCCCCCCEECCCCC PVPAPWPVLARLPRGPELSRAAASVTRDAVGVAAPVR CCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]