| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119866979
Identifier: 119866979
GI number: 119866979
Start: 1015366
End: 1015953
Strand: Reverse
Name: 119866979
Synonym: Mkms_0927
Alternate gene names: NA
Gene position: 1015953-1015366 (Counterclockwise)
Preceding gene: 119866980
Following gene: 119866978
Centisome position: 17.71
GC content: 73.3
Gene sequence:
>588_bases ATGCCGAGAGCCAAGCAGCGCACCCCCGAACTGCGGGACCGGCTGCTGGAGGTCGCCGTCGCGACGCTCAACGACGAGGG CGTCGCACGCCTGACCACCCGCCGCGTCGCCGAGCGGGCGGGCACATCGGTGCCCGCGGTCTACGAGCTGTTCGACGACA AGGCCGGGCTCGTGCGCGCGATCTTCTTCGAGGGCTTCCGGCGGCTGGGCCGCGACCTGGCGTCCACGCCGGTGACCGAC GACCCGGTCGCCGACGTCGAGGCACTCGTCCCGGTGTTCCGTCGCTTCTGCCTGGACTCGCCGCGGCTGGCGCAGGTGAT GTTCTCCCGGCCGTTCGCCGACTTCGACCCGGGCCCTGAGGAACTGGCCGCCGGCGAGGCGGTGCGCGACATCTTCCTCG ACCGCATCCAACGCTGCCTCGACGAGGGCGCGCTGGCCGGCGATGCGGTGGACATCGCACACGTGCTGCTCGCCCTGGCG AAGGGCCTCGCCGTGCAGGAGGCCGGCTGCTGGCTGGGCACGACGGCCCGCTCGGTCGAGCGGCGGTGGCGCCTCGGCGT GCGCGCGCTGCTGACGGGATTCTCGTGA
Upstream 100 bases:
>100_bases CGCCCACCTCGCCTCCAAGCTCAAGGTCCGCGACCAGGCACTGCAGGCCATCCGCGCCGGAATCGACGGGCTGGCAACGG AGTTCGGCGGCTAGGCCTCC
Downstream 100 bases:
>100_bases TTTCGGCGTGCGCGGTCGCGCTGAGCGCGACCTGCCACGCCGAAATCGCCACGCGGAAGTTGAGGCGAATGCCCCATGCC CGCCGGGGGTCTCCCGCCGC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Repressor; Regulatory Protein TetR; Transcriptional Regulatory Protein; TetR-Family Transcriptional Regulator
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MPRAKQRTPELRDRLLEVAVATLNDEGVARLTTRRVAERAGTSVPAVYELFDDKAGLVRAIFFEGFRRLGRDLASTPVTD DPVADVEALVPVFRRFCLDSPRLAQVMFSRPFADFDPGPEELAAGEAVRDIFLDRIQRCLDEGALAGDAVDIAHVLLALA KGLAVQEAGCWLGTTARSVERRWRLGVRALLTGFS
Sequences:
>Translated_195_residues MPRAKQRTPELRDRLLEVAVATLNDEGVARLTTRRVAERAGTSVPAVYELFDDKAGLVRAIFFEGFRRLGRDLASTPVTD DPVADVEALVPVFRRFCLDSPRLAQVMFSRPFADFDPGPEELAAGEAVRDIFLDRIQRCLDEGALAGDAVDIAHVLLALA KGLAVQEAGCWLGTTARSVERRWRLGVRALLTGFS >Mature_194_residues PRAKQRTPELRDRLLEVAVATLNDEGVARLTTRRVAERAGTSVPAVYELFDDKAGLVRAIFFEGFRRLGRDLASTPVTDD PVADVEALVPVFRRFCLDSPRLAQVMFSRPFADFDPGPEELAAGEAVRDIFLDRIQRCLDEGALAGDAVDIAHVLLALAK GLAVQEAGCWLGTTARSVERRWRLGVRALLTGFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21436; Mature: 21305
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRAKQRTPELRDRLLEVAVATLNDEGVARLTTRRVAERAGTSVPAVYELFDDKAGLVRA CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHH IFFEGFRRLGRDLASTPVTDDPVADVEALVPVFRRFCLDSPRLAQVMFSRPFADFDPGPE HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHH ELAAGEAVRDIFLDRIQRCLDEGALAGDAVDIAHVLLALAKGLAVQEAGCWLGTTARSVE HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHH RRWRLGVRALLTGFS HHHHHHHHHHHHCCC >Mature Secondary Structure PRAKQRTPELRDRLLEVAVATLNDEGVARLTTRRVAERAGTSVPAVYELFDDKAGLVRA CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHH IFFEGFRRLGRDLASTPVTDDPVADVEALVPVFRRFCLDSPRLAQVMFSRPFADFDPGPE HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHH ELAAGEAVRDIFLDRIQRCLDEGALAGDAVDIAHVLLALAKGLAVQEAGCWLGTTARSVE HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHH RRWRLGVRALLTGFS HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA