| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119866880
Identifier: 119866880
GI number: 119866880
Start: 894970
End: 897081
Strand: Reverse
Name: 119866880
Synonym: Mkms_0826
Alternate gene names: NA
Gene position: 897081-894970 (Counterclockwise)
Preceding gene: 119866886
Following gene: 119866879
Centisome position: 15.64
GC content: 62.55
Gene sequence:
>2112_bases ATGCCCACTCTAGCGATCGACAGGGGTTTCCTGGGAGATCTCGCAAAGCTGGAGAAGCCCGTTATCAGGCGCGTGACCGA GGTCTTCGACGAGTTCGACACCGCCACTCACACCGGGCTGCATCTGGAGAAGATCAACAACGCCCGCAATCCGCGGTTTC GTTCGATTCGTATCGACCAGTCCTGGCGTGGAATCGTGCTCGCTCCAGCCAGCGGTGACGTGTACACGCTTCTCAAGGTT CTACCGCACGATGACGCCTACGCGTGGGCGCAGCGGAGCAATCTTTCGGTCAATACCGCTACGGGCGGGATCGAGATCCG GGATGAAGTCGAACTGGAACGCCAGACTCCCGAGATGGAGGCTTCTGGGACAACGGCCGGCACGCCGCTGTTCGACCACG TTCGCGACGGTGAACTGTCCAGGCTAGGGATCGATGAGAGCGTGCGGGCCTTCGCGCGCACCGTCACGGATCAGGCGCAG CTCGAGGCGGCGAAATCGTTTCTTCCGGAGACACAGTGGGATGTGCTCGTCGGGCTGGCAGCTGGATTCACACCCGAAGA GGTCTGGGCAGAACTGGGTGCCGAGATCTTGAACGAACCGGTCGACACCGAGGACATCGATGCGGCCATCCTGCGCAGCC GCGACCGCGTCGTGCTCGTGAACGGCCCGGACGAACTCATGGACGTCTTTGCCTACCCGTTTGCGACATGGCGCGTATAT CTGCACCCGACGCAACGGGCGGTCGTCCAGGCCACCTACAAAGGGCCAGCGCGTGTCACTGGCGGTCCCGGCACCGGGAA GACGGTCGTCGCGCTGCATCGAGCCCACATGCTTGCGACGCTCGATGACGGCCGGGTACTGGTCACGACCTTCACCTCGA CACTGTCGGAGAGTTTGCGTTCTGGGCTCGACATGCTCATCGCCGACAAGGAGGTCGACAGCCGTATCGAGGTGTCGCAT GTCGACCGGCTGGCTCACCGGGTATTCCGCCACGAGCACGGAGCACCACGCATGCTGGGATCCGAGGACGAGAGGGCGCT ATGGGGAGGCCTCGCCACCGAACTCGGACTCGCCTTCACGCCCGTGTTCCTGTCCGAGGAGTGGCGGCAGGTGGTCCTCG CGCGACGAATCAGCACTGCCGACGCGTACCTCGCTGCGAAGCGCACCGGCCGAGGCCGCGCGCTGGGACCCGCACAACGT GCACAGGTCTGGCAGGCGATATGGGAGTTCGAGCAGACACTTACCAAGCAGGAAGTATGGACACACGAAACCATTCGCCG TGAGGCCACCCGCCTACTCGAAGGCTCGGCACACAAACCGTTCCGTCACATCGTCATCGACGAAGCGCAAGACCTCAGTC CCGACCAGTGGCGACTGCTGCGGGCAGCAGTCGCCGAAGCACCTGACGACATCTTCATCGCCGGTGACACCCACCAGCGG ATCTACGACAACCGTGTCAGCTTCCGGGAAGTCGGCATCAACATCGCAGGGCGGTCCTCCCGCCTCAATATCAATTACCG CACCACTGCGGAGATCTTGGGCTGGAGTCTGGGTCTGATGCGGGGTGAACCGATCGATGACATGGAGGGCGGTCTCGACT CCATCGCGGGGTGCAAGTCTTACGTACACGGTTCGCCGCCGATGCTGAGCGGCTCCGGCACGGCGGACGCGGAGGCTGAA CATATCGCCAAGGTCGTCAATGCGTGGATTGACCGGGGTGTCGCTCCCTCCGAGATCGGAATTGCGGTACGCGCGAAGTG GTTCGCTTCGAAGATCGAGCATGCGCTCAAGGCCGCCGGCATAGCGACGGTCGATCTCGCCCGCGCGTCGGAGGACGATG AAGCAGTCCACGTCGGAACGATGCACAGGATGAAAGGGTTGGAGTTCCGGTGTATGTGCGTCGCCGGTGTCACTGCCAAA TGGGTACCGGCATTGAACGCTGTCACCCCCATCGATGACGACAAGCAAACGCATCAACGCGACCTCGAACGTGAGCGCTG CTTGTTGTTCGTCGCCTGTACAAGGGCACGCGAAGAGCTTCTCGTCACCTGGCACGGCGAACCCAGCCCCTTCATAGCGG ACCTCGCACACGGCAAAGAGGAGAATCAATGA
Upstream 100 bases:
>100_bases AGGGCAACCGACAAAATCTTCCGAGTGTCAGCAACTGCCCGTATGGTCACTTGAGTCCCGTCGGACGAGGCGACGCATAG CGCGAATGGAGCTCTGAGAA
Downstream 100 bases:
>100_bases CTCGTCTGTCAACGCTGTTGGACGAAATCGACTCCGGCGCAGTGCTCCTCCCCGAGTTCCAGCGTGGGTATGTCTGGAAT CGCGATCAGGTCCGCGGCCT
Product: UvrD/REP helicase
Products: NA
Alternate protein names: DNA Helicase; LexA Repressor; DNA Helicase II; UvrD/Rep Helicase; NERD Domain Protein; Helicase; Superfamily I DNA/RNA Helicase-Like Protein; UvrD/REP Helicase Domain Protein; NERD Domain-Containing Protein; Superfamily I DNA/RNA Helicase; Plasmid Stabilization System; Superfamily Protein I DNA/RNA Helicase; Peptidase; Superfamily I DNA And RNA Helicase-Like Protein; UvrD/REP Type DNA Helicase; UvrD/REP Family ATP-Dependent DNA Helicase; Uvrd/Rep Helicase; NA Helicase.; DNA Helicase II-Like Protein; DNA/RNA Helicase Superfamily I
Number of amino acids: Translated: 703; Mature: 702
Protein sequence:
>703_residues MPTLAIDRGFLGDLAKLEKPVIRRVTEVFDEFDTATHTGLHLEKINNARNPRFRSIRIDQSWRGIVLAPASGDVYTLLKV LPHDDAYAWAQRSNLSVNTATGGIEIRDEVELERQTPEMEASGTTAGTPLFDHVRDGELSRLGIDESVRAFARTVTDQAQ LEAAKSFLPETQWDVLVGLAAGFTPEEVWAELGAEILNEPVDTEDIDAAILRSRDRVVLVNGPDELMDVFAYPFATWRVY LHPTQRAVVQATYKGPARVTGGPGTGKTVVALHRAHMLATLDDGRVLVTTFTSTLSESLRSGLDMLIADKEVDSRIEVSH VDRLAHRVFRHEHGAPRMLGSEDERALWGGLATELGLAFTPVFLSEEWRQVVLARRISTADAYLAAKRTGRGRALGPAQR AQVWQAIWEFEQTLTKQEVWTHETIRREATRLLEGSAHKPFRHIVIDEAQDLSPDQWRLLRAAVAEAPDDIFIAGDTHQR IYDNRVSFREVGINIAGRSSRLNINYRTTAEILGWSLGLMRGEPIDDMEGGLDSIAGCKSYVHGSPPMLSGSGTADAEAE HIAKVVNAWIDRGVAPSEIGIAVRAKWFASKIEHALKAAGIATVDLARASEDDEAVHVGTMHRMKGLEFRCMCVAGVTAK WVPALNAVTPIDDDKQTHQRDLERERCLLFVACTRAREELLVTWHGEPSPFIADLAHGKEENQ
Sequences:
>Translated_703_residues MPTLAIDRGFLGDLAKLEKPVIRRVTEVFDEFDTATHTGLHLEKINNARNPRFRSIRIDQSWRGIVLAPASGDVYTLLKV LPHDDAYAWAQRSNLSVNTATGGIEIRDEVELERQTPEMEASGTTAGTPLFDHVRDGELSRLGIDESVRAFARTVTDQAQ LEAAKSFLPETQWDVLVGLAAGFTPEEVWAELGAEILNEPVDTEDIDAAILRSRDRVVLVNGPDELMDVFAYPFATWRVY LHPTQRAVVQATYKGPARVTGGPGTGKTVVALHRAHMLATLDDGRVLVTTFTSTLSESLRSGLDMLIADKEVDSRIEVSH VDRLAHRVFRHEHGAPRMLGSEDERALWGGLATELGLAFTPVFLSEEWRQVVLARRISTADAYLAAKRTGRGRALGPAQR AQVWQAIWEFEQTLTKQEVWTHETIRREATRLLEGSAHKPFRHIVIDEAQDLSPDQWRLLRAAVAEAPDDIFIAGDTHQR IYDNRVSFREVGINIAGRSSRLNINYRTTAEILGWSLGLMRGEPIDDMEGGLDSIAGCKSYVHGSPPMLSGSGTADAEAE HIAKVVNAWIDRGVAPSEIGIAVRAKWFASKIEHALKAAGIATVDLARASEDDEAVHVGTMHRMKGLEFRCMCVAGVTAK WVPALNAVTPIDDDKQTHQRDLERERCLLFVACTRAREELLVTWHGEPSPFIADLAHGKEENQ >Mature_702_residues PTLAIDRGFLGDLAKLEKPVIRRVTEVFDEFDTATHTGLHLEKINNARNPRFRSIRIDQSWRGIVLAPASGDVYTLLKVL PHDDAYAWAQRSNLSVNTATGGIEIRDEVELERQTPEMEASGTTAGTPLFDHVRDGELSRLGIDESVRAFARTVTDQAQL EAAKSFLPETQWDVLVGLAAGFTPEEVWAELGAEILNEPVDTEDIDAAILRSRDRVVLVNGPDELMDVFAYPFATWRVYL HPTQRAVVQATYKGPARVTGGPGTGKTVVALHRAHMLATLDDGRVLVTTFTSTLSESLRSGLDMLIADKEVDSRIEVSHV DRLAHRVFRHEHGAPRMLGSEDERALWGGLATELGLAFTPVFLSEEWRQVVLARRISTADAYLAAKRTGRGRALGPAQRA QVWQAIWEFEQTLTKQEVWTHETIRREATRLLEGSAHKPFRHIVIDEAQDLSPDQWRLLRAAVAEAPDDIFIAGDTHQRI YDNRVSFREVGINIAGRSSRLNINYRTTAEILGWSLGLMRGEPIDDMEGGLDSIAGCKSYVHGSPPMLSGSGTADAEAEH IAKVVNAWIDRGVAPSEIGIAVRAKWFASKIEHALKAAGIATVDLARASEDDEAVHVGTMHRMKGLEFRCMCVAGVTAKW VPALNAVTPIDDDKQTHQRDLERERCLLFVACTRAREELLVTWHGEPSPFIADLAHGKEENQ
Specific function: Unknown
COG id: COG0210
COG function: function code L; Superfamily I DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77878; Mature: 77747
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: PS00659 GLYCOSYL_HYDROL_F5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLAIDRGFLGDLAKLEKPVIRRVTEVFDEFDTATHTGLHLEKINNARNPRFRSIRIDQ CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEEHHHHCCCCCCCEEEEEECC SWRGIVLAPASGDVYTLLKVLPHDDAYAWAQRSNLSVNTATGGIEIRDEVELERQTPEME CCCEEEEECCCCCHHHHHHHCCCCCHHHHHHCCCCEEEECCCCEEEHHHHHHHHCCCCCC ASGTTAGTPLFDHVRDGELSRLGIDESVRAFARTVTDQAQLEAAKSFLPETQWDVLVGLA CCCCCCCCCHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH AGFTPEEVWAELGAEILNEPVDTEDIDAAILRSRDRVVLVNGPDELMDVFAYPFATWRVY CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEECCCHHHHHHHHCCCEEEEEE LHPTQRAVVQATYKGPARVTGGPGTGKTVVALHRAHMLATLDDGRVLVTTFTSTLSESLR ECCCCCEEEEEECCCCCEECCCCCCCCHHHEEEHHHHEEEECCCCEEEEHHHHHHHHHHH SGLDMLIADKEVDSRIEVSHVDRLAHRVFRHEHGAPRMLGSEDERALWGGLATELGLAFT CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH PVFLSEEWRQVVLARRISTADAYLAAKRTGRGRALGPAQRAQVWQAIWEFEQTLTKQEVW HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH THETIRREATRLLEGSAHKPFRHIVIDEAQDLSPDQWRLLRAAVAEAPDDIFIAGDTHQR HHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHH IYDNRVSFREVGINIAGRSSRLNINYRTTAEILGWSLGLMRGEPIDDMEGGLDSIAGCKS HHHCCCCHHHHCEEEECCCCEEEEEEEHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHH YVHGSPPMLSGSGTADAEAEHIAKVVNAWIDRGVAPSEIGIAVRAKWFASKIEHALKAAG HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHCCEEEHHHHHHHHHHHHHHHCC IATVDLARASEDDEAVHVGTMHRMKGLEFRCMCVAGVTAKWVPALNAVTPIDDDKQTHQR CEEEEHHHCCCCCCEEEECHHHHHCCCCEEEEEEECCCHHHHCCCCCCCCCCCCHHHHHH DLERERCLLFVACTRAREELLVTWHGEPSPFIADLAHGKEENQ HHHHHHEEEEEEEHHCCCEEEEEECCCCCCHHHHHHCCCCCCC >Mature Secondary Structure PTLAIDRGFLGDLAKLEKPVIRRVTEVFDEFDTATHTGLHLEKINNARNPRFRSIRIDQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEEHHHHCCCCCCCEEEEEECC SWRGIVLAPASGDVYTLLKVLPHDDAYAWAQRSNLSVNTATGGIEIRDEVELERQTPEME CCCEEEEECCCCCHHHHHHHCCCCCHHHHHHCCCCEEEECCCCEEEHHHHHHHHCCCCCC ASGTTAGTPLFDHVRDGELSRLGIDESVRAFARTVTDQAQLEAAKSFLPETQWDVLVGLA CCCCCCCCCHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH AGFTPEEVWAELGAEILNEPVDTEDIDAAILRSRDRVVLVNGPDELMDVFAYPFATWRVY CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEECCCHHHHHHHHCCCEEEEEE LHPTQRAVVQATYKGPARVTGGPGTGKTVVALHRAHMLATLDDGRVLVTTFTSTLSESLR ECCCCCEEEEEECCCCCEECCCCCCCCHHHEEEHHHHEEEECCCCEEEEHHHHHHHHHHH SGLDMLIADKEVDSRIEVSHVDRLAHRVFRHEHGAPRMLGSEDERALWGGLATELGLAFT CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH PVFLSEEWRQVVLARRISTADAYLAAKRTGRGRALGPAQRAQVWQAIWEFEQTLTKQEVW HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH THETIRREATRLLEGSAHKPFRHIVIDEAQDLSPDQWRLLRAAVAEAPDDIFIAGDTHQR HHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHH IYDNRVSFREVGINIAGRSSRLNINYRTTAEILGWSLGLMRGEPIDDMEGGLDSIAGCKS HHHCCCCHHHHCEEEECCCCEEEEEEEHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHH YVHGSPPMLSGSGTADAEAEHIAKVVNAWIDRGVAPSEIGIAVRAKWFASKIEHALKAAG HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHCCEEEHHHHHHHHHHHHHHHCC IATVDLARASEDDEAVHVGTMHRMKGLEFRCMCVAGVTAKWVPALNAVTPIDDDKQTHQR CEEEEHHHCCCCCCEEEECHHHHHCCCCEEEEEEECCCHHHHCCCCCCCCCCCCHHHHHH DLERERCLLFVACTRAREELLVTWHGEPSPFIADLAHGKEENQ HHHHHHEEEEEEEHHCCCEEEEEECCCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA