| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119866870
Identifier: 119866870
GI number: 119866870
Start: 871904
End: 872833
Strand: Reverse
Name: 119866870
Synonym: Mkms_0816
Alternate gene names: NA
Gene position: 872833-871904 (Counterclockwise)
Preceding gene: 119866877
Following gene: 119866869
Centisome position: 15.21
GC content: 73.12
Gene sequence:
>930_bases ATGACCAGCCTGATGCGGCACCCCTACCGCGTGCCGCGCGTCGAGAAGCCGCGTGCCGAAGGCCGCTTCTACCTGCCCGG CGGCCGCCGCCTCGGCTACGCCGAGTTCGGTGATCCCTCGGGAGATCCGGTGCTGTGGTTCCACGGCACCCCCGGCGGGC GCCGCCAGTTGCCGCTGCTCGGCCGGCGGGCCGCCGAAAAGCTCGGCCTGCGCGTCGTGTTGCTCGGCCGTCCCGGCAGC GGCCTGTCAGACCCGCATCCCTACAACGCCATCGCCGACTGGGCGACCGACGTCACGCACGTGGCCGACGCCCTCGGCGC CGAGCGTCTCGCCGTGGTCGGGCTGTCCGGCGGCGGCCCCTACGCCCTGGCCTGCGCCGCCGTGCCGCCGCTGGCGAGTC GCGTCGCCGCCGTCGCCGTGCTCGGCGGCGTCGTGCCCTCCGTCGGCCCCGAGGCGCTGGCCACCGGCGCCGTCGACCTG GCCCGCCGCTTCGCCCCCGTCCTTCACGAGCTGCGCCGTCCCCTCGCCGGAGTCATGTCGACACTCCTGACCCCGATGCT TCCGGTCGCGCACTACGCCTGTCAGGCCTACGCGATGACCACACCCGAGGGCGACCGCCGCGTTCTCCAAGATCCCGAGA TGGAGGGCATGTTCATCGACGACCTCGTCCTGGTCGCCAAGGGCCGCTTCCAGGCCATCGTCGACGACGCCCGACTCTTC GGGCGGGACTGGGGCTTCCGGCTCGCCGACGTCTCGGCGCCGGTGCGGTGGTGGCACGGCGACGTCGACCACATCGTCCC GCTGGCCGATGCGCAGAAAGCCGTCGAACTGCTGCCCGACGCCGAACTCATCCTGCGAACCGAGGAGAGCCACCTCGGCG GCTTCGCCACCGCCGACGAGGTCCTGCACTTCGTCCGCTCGCACCTCTGA
Upstream 100 bases:
>100_bases GATCTTCCGATTCTCCGGCACCGCTGACACCCCCGACTCCGCCAATTTCTCCGCGCCGACAGCCTTTGCACCGTTACATT CAGTCAGCGAGGTGACATCC
Downstream 100 bases:
>100_bases AATCCGCCTACACAGCCACACCTGTGCGCTAGCGTCATCGTCAGCGATGGCCGACGCGGGTGGGCACACATGGTTGATTC CTGGGAGCTGATCCTCCACC
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Hydrolase; Alpha/Beta Hydrolase Fold Protein; RNA Polymerase Sigma Factor SigI; Hydrolase Alpha/Beta Hydrolase Fold Family Protein; Hydrolase Or Acyltransferase Of Alpha/Beta Superfamily
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MTSLMRHPYRVPRVEKPRAEGRFYLPGGRRLGYAEFGDPSGDPVLWFHGTPGGRRQLPLLGRRAAEKLGLRVVLLGRPGS GLSDPHPYNAIADWATDVTHVADALGAERLAVVGLSGGGPYALACAAVPPLASRVAAVAVLGGVVPSVGPEALATGAVDL ARRFAPVLHELRRPLAGVMSTLLTPMLPVAHYACQAYAMTTPEGDRRVLQDPEMEGMFIDDLVLVAKGRFQAIVDDARLF GRDWGFRLADVSAPVRWWHGDVDHIVPLADAQKAVELLPDAELILRTEESHLGGFATADEVLHFVRSHL
Sequences:
>Translated_309_residues MTSLMRHPYRVPRVEKPRAEGRFYLPGGRRLGYAEFGDPSGDPVLWFHGTPGGRRQLPLLGRRAAEKLGLRVVLLGRPGS GLSDPHPYNAIADWATDVTHVADALGAERLAVVGLSGGGPYALACAAVPPLASRVAAVAVLGGVVPSVGPEALATGAVDL ARRFAPVLHELRRPLAGVMSTLLTPMLPVAHYACQAYAMTTPEGDRRVLQDPEMEGMFIDDLVLVAKGRFQAIVDDARLF GRDWGFRLADVSAPVRWWHGDVDHIVPLADAQKAVELLPDAELILRTEESHLGGFATADEVLHFVRSHL >Mature_308_residues TSLMRHPYRVPRVEKPRAEGRFYLPGGRRLGYAEFGDPSGDPVLWFHGTPGGRRQLPLLGRRAAEKLGLRVVLLGRPGSG LSDPHPYNAIADWATDVTHVADALGAERLAVVGLSGGGPYALACAAVPPLASRVAAVAVLGGVVPSVGPEALATGAVDLA RRFAPVLHELRRPLAGVMSTLLTPMLPVAHYACQAYAMTTPEGDRRVLQDPEMEGMFIDDLVLVAKGRFQAIVDDARLFG RDWGFRLADVSAPVRWWHGDVDHIVPLADAQKAVELLPDAELILRTEESHLGGFATADEVLHFVRSHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33295; Mature: 33164
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLMRHPYRVPRVEKPRAEGRFYLPGGRRLGYAEFGDPSGDPVLWFHGTPGGRRQLPLL CCCHHHCCCCCCCCCCCCCCCEEECCCCCEECCCCCCCCCCCEEEEEECCCCCCCCCCHH GRRAAEKLGLRVVLLGRPGSGLSDPHPYNAIADWATDVTHVADALGAERLAVVGLSGGGP HHHHHHHHCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC YALACAAVPPLASRVAAVAVLGGVVPSVGPEALATGAVDLARRFAPVLHELRRPLAGVMS EEEEEHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLLTPMLPVAHYACQAYAMTTPEGDRRVLQDPEMEGMFIDDLVLVAKGRFQAIVDDARLF HHHHHHHHHHHHHHHHEEECCCCCCCHHCCCCCCCCEEHHHHHHHHCCHHHHHHHHHHHH GRDWGFRLADVSAPVRWWHGDVDHIVPLADAQKAVELLPDAELILRTEESHLGGFATADE HCCCCCEEECCCCCHHEECCCHHHEECHHHHHHHHHHCCCCCEEEEECHHHCCCCCCHHH VLHFVRSHL HHHHHHHCC >Mature Secondary Structure TSLMRHPYRVPRVEKPRAEGRFYLPGGRRLGYAEFGDPSGDPVLWFHGTPGGRRQLPLL CCHHHCCCCCCCCCCCCCCCEEECCCCCEECCCCCCCCCCCEEEEEECCCCCCCCCCHH GRRAAEKLGLRVVLLGRPGSGLSDPHPYNAIADWATDVTHVADALGAERLAVVGLSGGGP HHHHHHHHCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC YALACAAVPPLASRVAAVAVLGGVVPSVGPEALATGAVDLARRFAPVLHELRRPLAGVMS EEEEEHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLLTPMLPVAHYACQAYAMTTPEGDRRVLQDPEMEGMFIDDLVLVAKGRFQAIVDDARLF HHHHHHHHHHHHHHHHEEECCCCCCCHHCCCCCCCCEEHHHHHHHHCCHHHHHHHHHHHH GRDWGFRLADVSAPVRWWHGDVDHIVPLADAQKAVELLPDAELILRTEESHLGGFATADE HCCCCCEEECCCCCHHEECCCHHHEECHHHHHHHHHHCCCCCEEEEECHHHCCCCCCHHH VLHFVRSHL HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA